RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 TTC13Q8NBP0 860 aa6.39□□□□□ -1.39
SDCBP-207ENST00000520168 DPF3Q92784 378 aa6.39□□□□□ -1.39
SDCBP-207ENST00000520168 TMUB1Q9BVT8 246 aa6.39□□□□□ -1.39
SDCBP-207ENST00000520168 PNNQ9H307 717 aaKnown RBP6.39□□□□□ -1.39
SDCBP-207ENST00000520168 PRO3102Q9H379 93 aa6.39□□□□□ -1.39
SDCBP-207ENST00000520168 MED23Q9ULK4 1368 aa6.39□□□□□ -1.39
SDCBP-207ENST00000520168 ARAP2Q8WZ64 1704 aa6.39□□□□□ -1.39
SDCBP-207ENST00000520168 ATP2B4P23634 1241 aa6.38□□□□□ -1.39
SDCBP-207ENST00000520168 IREB2P48200 963 aaKnown RBP6.38□□□□□ -1.39
SDCBP-207ENST00000520168 SLC4A3P48751 1232 aa6.38□□□□□ -1.39
SDCBP-207ENST00000520168 SUPT20HL1Q3ZLR7 823 aa6.38□□□□□ -1.39
SDCBP-207ENST00000520168 STRIP1Q5VSL9 837 aa6.38□□□□□ -1.39
SDCBP-207ENST00000520168 PRAMEF18Q5VWM3 479 aa6.38□□□□□ -1.39
SDCBP-207ENST00000520168 COPS6Q7L5N1 327 aa6.38□□□□□ -1.39
SDCBP-207ENST00000520168 ZFYVE28Q9HCC9 887 aa6.38□□□□□ -1.39
SDCBP-207ENST00000520168 ZCCHC17Q9NP64 241 aaKnown RBP6.38□□□□□ -1.39
SDCBP-207ENST00000520168 PTCH2Q9Y6C5 1203 aa6.38□□□□□ -1.39
SDCBP-207ENST00000520168 ZSWIM8A7E2V4 1837 aa6.37□□□□□ -1.39
SDCBP-207ENST00000520168 SSC5DA1L4H1 1573 aa6.37□□□□□ -1.39
SDCBP-207ENST00000520168 IRS4O14654 1257 aaPredicted RBP6.37□□□□□ -1.39
SDCBP-207ENST00000520168 MYO1BO43795 1136 aa6.37□□□□□ -1.39
SDCBP-207ENST00000520168 EIF2S2P20042 333 aaKnown RBP6.37□□□□□ -1.39
SDCBP-207ENST00000520168 TRIM28Q13263 835 aaKnown RBP6.37□□□□□ -1.39
SDCBP-207ENST00000520168 PRKG1Q13976 671 aa6.37□□□□□ -1.39
SDCBP-207ENST00000520168 CCDC152Q4G0S7 254 aa6.37□□□□□ -1.39
SDCBP-207ENST00000520168 SWT1Q5T5J6 900 aaKnown RBP6.37□□□□□ -1.39
SDCBP-207ENST00000520168 ANKRD13AQ8IZ07 590 aa6.37□□□□□ -1.39
SDCBP-207ENST00000520168 HELBQ8NG08 1087 aaPredicted RBP6.37□□□□□ -1.39
SDCBP-207ENST00000520168 PLBD2Q8NHP8 589 aa6.37□□□□□ -1.39
SDCBP-207ENST00000520168 XAGE3Q8WTP9 111 aa6.37□□□□□ -1.39
SDCBP-207ENST00000520168 FAM89AQ96GI7 184 aa6.37□□□□□ -1.39
SDCBP-207ENST00000520168 THUMPD2Q9BTF0 503 aaKnown RBP6.37□□□□□ -1.39
SDCBP-207ENST00000520168 TSPYL4Q9UJ04 414 aa6.37□□□□□ -1.39
SDCBP-207ENST00000520168 STXBP5LQ9Y2K9 1186 aa6.37□□□□□ -1.39
SDCBP-207ENST00000520168 ALPK3Q96L96 1907 aa6.37□□□□□ -1.39
SDCBP-207ENST00000520168 ZNF804BA4D1E1 1349 aa6.36□□□□□ -1.39
SDCBP-207ENST00000520168 SASH1O94885 1247 aa6.36□□□□□ -1.39
SDCBP-207ENST00000520168 GJA8P48165 433 aa6.36□□□□□ -1.39
SDCBP-207ENST00000520168 GTF2A2P52657 109 aa6.36□□□□□ -1.39
SDCBP-207ENST00000520168 AIMP1Q12904 312 aaKnown RBP6.36□□□□□ -1.39
SDCBP-207ENST00000520168 TAF1CQ15572 869 aaPredicted RBP6.36□□□□□ -1.39
SDCBP-207ENST00000520168 NFE2L2Q16236 605 aa6.36□□□□□ -1.39
SDCBP-207ENST00000520168 PROSER3Q2NL68 480 aa6.36□□□□□ -1.39
SDCBP-207ENST00000520168 DACT2Q5SW24 774 aa6.36□□□□□ -1.39
SDCBP-207ENST00000520168 PADI6Q6TGC4 694 aa6.36□□□□□ -1.39
SDCBP-207ENST00000520168 ANKRD18AQ8IVF6 992 aa6.36□□□□□ -1.39
SDCBP-207ENST00000520168 MTMR14Q8NCE2 650 aa6.36□□□□□ -1.39
SDCBP-207ENST00000520168 ISCA1Q9BUE6 129 aa6.36□□□□□ -1.39
SDCBP-207ENST00000520168 PRR14Q9BWN1 585 aa6.36□□□□□ -1.39
SDCBP-207ENST00000520168 COA1Q9GZY4 146 aa6.36□□□□□ -1.39
SDCBP-207ENST00000520168 DEFB129Q9H1M3 183 aa6.36□□□□□ -1.39
SDCBP-207ENST00000520168 NPDC1Q9NQX5 325 aaPredicted RBP6.36□□□□□ -1.39
SDCBP-207ENST00000520168 SCAF8Q9UPN6 1271 aaKnown RBP6.36□□□□□ -1.39
SDCBP-207ENST00000520168 A0A1B0GUL6 1792 aa6.36□□□□□ -1.39
SDCBP-207ENST00000520168 MAPK8IP3Q9UPT6 1336 aa6.35□□□□□ -1.39
SDCBP-207ENST00000520168 ZBTB7BO15156 539 aaPredicted RBP6.35□□□□□ -1.39
SDCBP-207ENST00000520168 HOXB7P09629 217 aa6.35□□□□□ -1.39
SDCBP-207ENST00000520168 HOXD10P28358 340 aa6.35□□□□□ -1.39
SDCBP-207ENST00000520168 BMP8BP34820 402 aa6.35□□□□□ -1.39
SDCBP-207ENST00000520168 ZEB1P37275 1124 aaPredicted RBP6.35□□□□□ -1.39
SDCBP-207ENST00000520168 COPS2P61201 443 aa6.35□□□□□ -1.39
SDCBP-207ENST00000520168 LACTBP83111 547 aaPredicted RBP6.35□□□□□ -1.39
SDCBP-207ENST00000520168 TNFAIP1Q13829 316 aa6.35□□□□□ -1.39
SDCBP-207ENST00000520168 UBE2Q1Q7Z7E8 422 aa6.35□□□□□ -1.39
SDCBP-207ENST00000520168 ZBTB38Q8NAP3 1195 aaPredicted RBP6.35□□□□□ -1.39
SDCBP-207ENST00000520168 ZBED3Q96IU2 234 aaPredicted RBP6.35□□□□□ -1.39
SDCBP-207ENST00000520168 CDC5LQ99459 802 aaKnown RBP6.35□□□□□ -1.39
SDCBP-207ENST00000520168 PTPN18Q99952 460 aa6.35□□□□□ -1.39
SDCBP-207ENST00000520168 DNAH12Q6ZR08 3092 aa6.35□□□□□ -1.39
SDCBP-207ENST00000520168 TLR2O60603 784 aa6.34□□□□□ -1.39
SDCBP-207ENST00000520168 PDE8AO60658 829 aa6.34□□□□□ -1.39
SDCBP-207ENST00000520168 ANXA1P04083 346 aa6.34□□□□□ -1.39
SDCBP-207ENST00000520168 GJB1P08034 283 aa6.34□□□□□ -1.39
SDCBP-207ENST00000520168 UBXN2AP68543 259 aa6.34□□□□□ -1.39
SDCBP-207ENST00000520168 LMOD3Q0VAK6 560 aa6.34□□□□□ -1.39
SDCBP-207ENST00000520168 DLGAP5Q15398 846 aa6.34□□□□□ -1.39
SDCBP-207ENST00000520168 ZNF787Q6DD87 383 aa6.34□□□□□ -1.39
SDCBP-207ENST00000520168 TTLL5Q6EMB2 1281 aa6.34□□□□□ -1.39
SDCBP-207ENST00000520168 DEFB123Q8N688 67 aa6.34□□□□□ -1.39
SDCBP-207ENST00000520168 SH3TC2Q8TF17 1288 aa6.34□□□□□ -1.39
SDCBP-207ENST00000520168 OPTNQ96CV9 577 aa6.34□□□□□ -1.39
SDCBP-207ENST00000520168 SHISA4Q96DD7 197 aa6.34□□□□□ -1.39
SDCBP-207ENST00000520168 CLMNQ96JQ2 1002 aa6.34□□□□□ -1.39
SDCBP-207ENST00000520168 COL25A1Q9BXS0 654 aaPredicted RBP6.34□□□□□ -1.39
SDCBP-207ENST00000520168 BSDC1Q9NW68 430 aaPredicted RBP6.34□□□□□ -1.39
SDCBP-207ENST00000520168 DBF4Q9UBU7 674 aaPredicted RBP6.34□□□□□ -1.39
SDCBP-207ENST00000520168 CDH23Q9H251 3354 aa6.34□□□□□ -1.39
SDCBP-207ENST00000520168 CCL15-CCL14A0A0B4J2E2 113 aa6.33□□□□□ -1.4
SDCBP-207ENST00000520168 WTIPA6NIX2 430 aaPredicted RBP6.33□□□□□ -1.4
SDCBP-207ENST00000520168 TULP1O00294 542 aaPredicted RBP6.33□□□□□ -1.4
SDCBP-207ENST00000520168 FARP2O94887 1054 aaPredicted RBP6.33□□□□□ -1.4
SDCBP-207ENST00000520168 GJA5P36382 358 aa6.33□□□□□ -1.4
SDCBP-207ENST00000520168 CCT4P50991 539 aaKnown RBP6.33□□□□□ -1.4
SDCBP-207ENST00000520168 CAP1Q01518 475 aa6.33□□□□□ -1.4
SDCBP-207ENST00000520168 CCL15Q16663 113 aa6.33□□□□□ -1.4
SDCBP-207ENST00000520168 KIAA0825Q8IV33 1275 aa6.33□□□□□ -1.4
SDCBP-207ENST00000520168 CCDC191Q8NCU4 936 aa6.33□□□□□ -1.4
SDCBP-207ENST00000520168 RAET1EQ8TD07 263 aa6.33□□□□□ -1.4
SDCBP-207ENST00000520168 TRIM47Q96LD4 638 aa6.33□□□□□ -1.4
SDCBP-207ENST00000520168 PLEKHF1Q96S99 279 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms