RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 HSP90AB1P08238 724 aaKnown RBP6.17□□□□□ -1.42
SDC2-204ENST00000519914 EIF4A1P60842 406 aaKnown RBP6.17□□□□□ -1.42
SDC2-204ENST00000519914 MTX1Q13505 466 aa6.17□□□□□ -1.42
SDC2-204ENST00000519914 IRF5Q13568 498 aa6.17□□□□□ -1.42
SDC2-204ENST00000519914 GRIN2CQ14957 1233 aa6.17□□□□□ -1.42
SDC2-204ENST00000519914 AMOTQ4VCS5 1084 aa6.17□□□□□ -1.42
SDC2-204ENST00000519914 AKAP4Q5JQC9 854 aa6.17□□□□□ -1.42
SDC2-204ENST00000519914 C16orf71Q8IYS4 520 aaPredicted RBP6.17□□□□□ -1.42
SDC2-204ENST00000519914 FAM43AQ8N2R8 423 aa6.17□□□□□ -1.42
SDC2-204ENST00000519914 ABTB2Q8N961 1025 aa6.17□□□□□ -1.42
SDC2-204ENST00000519914 OTUD7AQ8TE49 926 aaPredicted RBP6.17□□□□□ -1.42
SDC2-204ENST00000519914 TNPO1Q92973 898 aaKnown RBP6.17□□□□□ -1.42
SDC2-204ENST00000519914 PRM3Q9NNZ6 103 aa6.17□□□□□ -1.42
SDC2-204ENST00000519914 GDF2Q9UK05 429 aaPredicted RBP6.17□□□□□ -1.42
SDC2-204ENST00000519914 ATXN7L1Q9ULK2 861 aaPredicted RBP6.17□□□□□ -1.42
SDC2-204ENST00000519914 DCCP43146 1447 aa6.16□□□□□ -1.42
SDC2-204ENST00000519914 MRC1P22897 1456 aa6.16□□□□□ -1.42
SDC2-204ENST00000519914 PKD1L3Q7Z443 1732 aa6.16□□□□□ -1.42
SDC2-204ENST00000519914 PARP4Q9UKK3 1724 aaKnown RBP6.16□□□□□ -1.42
SDC2-204ENST00000519914 F6X3S4 739 aa6.16□□□□□ -1.42
SDC2-204ENST00000519914 COL8A1P27658 744 aa6.16□□□□□ -1.42
SDC2-204ENST00000519914 ABL2P42684 1182 aa6.16□□□□□ -1.42
SDC2-204ENST00000519914 MCM2P49736 904 aa6.16□□□□□ -1.42
SDC2-204ENST00000519914 NUCB2P80303 420 aa6.16□□□□□ -1.42
SDC2-204ENST00000519914 ARHGEF25Q86VW2 580 aa6.16□□□□□ -1.42
SDC2-204ENST00000519914 GOLGA6L1Q8N7Z2 621 aa6.16□□□□□ -1.42
SDC2-204ENST00000519914 LRRCC1Q9C099 1032 aa6.16□□□□□ -1.42
SDC2-204ENST00000519914 USP44Q9H0E7 712 aa6.16□□□□□ -1.42
SDC2-204ENST00000519914 SUV39H2Q9H5I1 410 aa6.16□□□□□ -1.42
SDC2-204ENST00000519914 MIS18AQ9NYP9 233 aa6.16□□□□□ -1.42
SDC2-204ENST00000519914 SERTAD1Q9UHV2 236 aa6.16□□□□□ -1.42
SDC2-204ENST00000519914 RGPD5Q99666 1765 aa6.15□□□□□ -1.42
SDC2-204ENST00000519914 PNMA6EA0A0J9YXQ4 647 aa6.15□□□□□ -1.43
SDC2-204ENST00000519914 GOLGA6L3A6NEY3 463 aa6.15□□□□□ -1.43
SDC2-204ENST00000519914 NEURL1BA8MQ27 555 aa6.15□□□□□ -1.43
SDC2-204ENST00000519914 SMARCA5O60264 1052 aaPredicted RBP6.15□□□□□ -1.43
SDC2-204ENST00000519914 MX1P20591 662 aa6.15□□□□□ -1.43
SDC2-204ENST00000519914 MRE11P49959 708 aa6.15□□□□□ -1.43
SDC2-204ENST00000519914 GDF10P55107 478 aa6.15□□□□□ -1.43
SDC2-204ENST00000519914 FKBP5Q13451 457 aaPredicted RBP6.15□□□□□ -1.43
SDC2-204ENST00000519914 CUL4AQ13619 759 aa6.15□□□□□ -1.43
SDC2-204ENST00000519914 LBRQ14739 615 aaKnown RBP6.15□□□□□ -1.43
SDC2-204ENST00000519914 BEND3Q5T5X7 828 aa6.15□□□□□ -1.43
SDC2-204ENST00000519914 NBPF6Q5VWK0 638 aa6.15□□□□□ -1.43
SDC2-204ENST00000519914 NBPF4Q96M43 638 aa6.15□□□□□ -1.43
SDC2-204ENST00000519914 ZCCHC2Q9C0B9 1178 aaKnown RBP6.15□□□□□ -1.43
SDC2-204ENST00000519914 GDPD2Q9HCC8 539 aa6.15□□□□□ -1.43
SDC2-204ENST00000519914 BRPF3Q9ULD4 1205 aa6.15□□□□□ -1.43
SDC2-204ENST00000519914 UTYO14607 1347 aa6.15□□□□□ -1.43
SDC2-204ENST00000519914 PXDNQ92626 1479 aa6.15□□□□□ -1.43
SDC2-204ENST00000519914 RNMTO43148 476 aaKnown RBP6.14□□□□□ -1.43
SDC2-204ENST00000519914 ALDH1L1O75891 902 aa6.14□□□□□ -1.43
SDC2-204ENST00000519914 FURINP09958 794 aa6.14□□□□□ -1.43
SDC2-204ENST00000519914 XRCC6P12956 609 aaKnown RBP eCLIP6.14□□□□□ -1.43
SDC2-204ENST00000519914 CHMLP26374 656 aa6.14□□□□□ -1.43
SDC2-204ENST00000519914 BAG6P46379 1132 aa6.14□□□□□ -1.43
SDC2-204ENST00000519914 SCNN1DP51172 638 aa6.14□□□□□ -1.43
SDC2-204ENST00000519914 KLHL40Q2TBA0 621 aa6.14□□□□□ -1.43
SDC2-204ENST00000519914 PLEKHO1Q53GL0 409 aaPredicted RBP6.14□□□□□ -1.43
SDC2-204ENST00000519914 HSP90AB4PQ58FF6 505 aa6.14□□□□□ -1.43
SDC2-204ENST00000519914 ARSJQ5FYB0 599 aaPredicted RBP6.14□□□□□ -1.43
SDC2-204ENST00000519914 HDGFL1Q5TGJ6 251 aa6.14□□□□□ -1.43
SDC2-204ENST00000519914 INTS4Q96HW7 963 aaKnown RBP6.14□□□□□ -1.43
SDC2-204ENST00000519914 BTBD6Q96KE9 485 aa6.14□□□□□ -1.43
SDC2-204ENST00000519914 NDFIP2Q9NV92 336 aa6.14□□□□□ -1.43
SDC2-204ENST00000519914 HDAC5Q9UQL6 1122 aa6.14□□□□□ -1.43
SDC2-204ENST00000519914 COL15A1P39059 1388 aa6.14□□□□□ -1.43
SDC2-204ENST00000519914 C1orf167Q5SNV9 1468 aa6.14□□□□□ -1.43
SDC2-204ENST00000519914 LAMB4A4D0S4 1761 aa6.13□□□□□ -1.43
SDC2-204ENST00000519914 GLI3P10071 1580 aa6.13□□□□□ -1.43
SDC2-204ENST00000519914 ADCY9O60503 1353 aa6.13□□□□□ -1.43
SDC2-204ENST00000519914 TTC41PQ6P2S7 1318 aa6.13□□□□□ -1.43
SDC2-204ENST00000519914 DCDC2BA2VCK2 349 aa6.13□□□□□ -1.43
SDC2-204ENST00000519914 BAG4O95429 457 aaKnown RBP6.13□□□□□ -1.43
SDC2-204ENST00000519914 GCP02774 474 aa6.13□□□□□ -1.43
SDC2-204ENST00000519914 INHAP05111 366 aa6.13□□□□□ -1.43
SDC2-204ENST00000519914 UBTFL1P0CB47 393 aaPredicted RBP6.13□□□□□ -1.43
SDC2-204ENST00000519914 SLC4A10Q6U841 1118 aa6.13□□□□□ -1.43
SDC2-204ENST00000519914 LINC00114Q6XXX2 140 aa6.13□□□□□ -1.43
SDC2-204ENST00000519914 ILDR2Q71H61 639 aa6.13□□□□□ -1.43
SDC2-204ENST00000519914 PI4K2BQ8TCG2 481 aa6.13□□□□□ -1.43
SDC2-204ENST00000519914 DNAAF4Q8WXU2 420 aa6.13□□□□□ -1.43
SDC2-204ENST00000519914 KIF1BPQ96EK5 621 aa6.13□□□□□ -1.43
SDC2-204ENST00000519914 NIFKQ9BYG3 293 aaKnown RBP6.13□□□□□ -1.43
SDC2-204ENST00000519914 CRISPLD1Q9H336 500 aa6.13□□□□□ -1.43
SDC2-204ENST00000519914 PCDHGC4Q9Y5F7 938 aa6.13□□□□□ -1.43
SDC2-204ENST00000519914 LRRFIP2Q9Y608 721 aaKnown RBP6.13□□□□□ -1.43
SDC2-204ENST00000519914 C5P01031 1676 aa6.12□□□□□ -1.43
SDC2-204ENST00000519914 GOLGA6L22H0YM25 854 aa6.12□□□□□ -1.43
SDC2-204ENST00000519914 KHNYNO15037 678 aaKnown RBP6.12□□□□□ -1.43
SDC2-204ENST00000519914 ATXN7O15265 892 aaPredicted RBP6.12□□□□□ -1.43
SDC2-204ENST00000519914 RRP9O43818 475 aaKnown RBP6.12□□□□□ -1.43
SDC2-204ENST00000519914 NCLP19338 710 aaKnown RBP6.12□□□□□ -1.43
SDC2-204ENST00000519914 CD33P20138 364 aa6.12□□□□□ -1.43
SDC2-204ENST00000519914 MCCP23508 829 aa6.12□□□□□ -1.43
SDC2-204ENST00000519914 SSFA2P28290 1259 aa6.12□□□□□ -1.43
SDC2-204ENST00000519914 SMTNP53814 917 aa6.12□□□□□ -1.43
SDC2-204ENST00000519914 ZNF445P59923 1031 aa6.12□□□□□ -1.43
SDC2-204ENST00000519914 PSME1Q06323 249 aa6.12□□□□□ -1.43
SDC2-204ENST00000519914 SEMA3FQ13275 785 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms