RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 EDC3Q96F86 508 aaKnown RBP14.42□□□□□ -0.1
HPS4-218ENST00000519774 MRIQ9BWK5 157 aa14.42□□□□□ -0.1
HPS4-218ENST00000519774 LNPKQ9C0E8 428 aa14.42□□□□□ -0.1
HPS4-218ENST00000519774 TMOD2Q9NZR1 351 aa14.42□□□□□ -0.1
HPS4-218ENST00000519774 MROH7-TTC4A0A0A0MT08 1334 aa14.41□□□□□ -0.1
HPS4-218ENST00000519774 TCP10L2B9ZVM9 353 aa14.41□□□□□ -0.1
HPS4-218ENST00000519774 CELF2O95319 508 aaKnown RBP14.41□□□□□ -0.1
HPS4-218ENST00000519774 LDHCP07864 332 aa14.41□□□□□ -0.1
HPS4-218ENST00000519774 MX1P20591 662 aa14.41□□□□□ -0.1
HPS4-218ENST00000519774 BTDP43251 543 aa14.41□□□□□ -0.1
HPS4-218ENST00000519774 HTRA3P83110 453 aa14.41□□□□□ -0.1
HPS4-218ENST00000519774 PRAMEF18Q5VWM3 479 aa14.41□□□□□ -0.1
HPS4-218ENST00000519774 NAA16Q6N069 864 aaPredicted RBP14.41□□□□□ -0.1
HPS4-218ENST00000519774 ZNF384Q8TF68 577 aa14.41□□□□□ -0.1
HPS4-218ENST00000519774 CDCA5Q96FF9 252 aa14.41□□□□□ -0.1
HPS4-218ENST00000519774 PAG1Q9NWQ8 432 aa14.41□□□□□ -0.1
HPS4-218ENST00000519774 GAKO14976 1311 aa14.41□□□□□ -0.1
HPS4-218ENST00000519774 TNFAIP1Q13829 316 aa14.4□□□□□ -0.1
HPS4-218ENST00000519774 TTF1Q15361 905 aaPredicted RBP14.4□□□□□ -0.1
HPS4-218ENST00000519774 CHD1LQ86WJ1 897 aa14.4□□□□□ -0.1
HPS4-218ENST00000519774 HAUS7Q99871 368 aa14.4□□□□□ -0.1
HPS4-218ENST00000519774 TTC41PQ6P2S7 1318 aa14.4□□□□□ -0.1
HPS4-218ENST00000519774 TMEM88BA6NKF7 163 aa14.39□□□□□ -0.11
HPS4-218ENST00000519774 NUCB1Q02818 461 aa14.39□□□□□ -0.11
HPS4-218ENST00000519774 MAP3K12Q12852 859 aa14.39□□□□□ -0.11
HPS4-218ENST00000519774 CDC42EP5Q6NZY7 148 aa14.39□□□□□ -0.11
HPS4-218ENST00000519774 MAGEB6Q8N7X4 407 aa14.39□□□□□ -0.11
HPS4-218ENST00000519774 NOL10Q9BSC4 688 aaKnown RBP14.39□□□□□ -0.11
HPS4-218ENST00000519774 DEFB129Q9H1M3 183 aa14.39□□□□□ -0.11
HPS4-218ENST00000519774 USP40Q9NVE5 1235 aa14.39□□□□□ -0.11
HPS4-218ENST00000519774 MYH7P12883 1935 aa14.39□□□□□ -0.11
HPS4-218ENST00000519774 ERC2O15083 957 aa14.38□□□□□ -0.11
HPS4-218ENST00000519774 MAP4K4O95819 1239 aaPredicted RBP14.38□□□□□ -0.11
HPS4-218ENST00000519774 CYP7A1P22680 504 aa14.38□□□□□ -0.11
HPS4-218ENST00000519774 TNNI2P48788 182 aa14.38□□□□□ -0.11
HPS4-218ENST00000519774 RASA3Q14644 834 aa14.38□□□□□ -0.11
HPS4-218ENST00000519774 FAM163AQ96GL9 167 aaPredicted RBP14.38□□□□□ -0.11
HPS4-218ENST00000519774 CREBZFQ9NS37 354 aa14.38□□□□□ -0.11
HPS4-218ENST00000519774 ABT1Q9ULW3 272 aaKnown RBP14.38□□□□□ -0.11
HPS4-218ENST00000519774 SALL3Q9BXA9 1300 aa14.38□□□□□ -0.11
HPS4-218ENST00000519774 GPR75-ASB3A0A0A6YYF3 556 aa14.37□□□□□ -0.11
HPS4-218ENST00000519774 GLRX3O76003 335 aaKnown RBP14.37□□□□□ -0.11
HPS4-218ENST00000519774 NF2P35240 595 aa14.37□□□□□ -0.11
HPS4-218ENST00000519774 CST9Q5W186 159 aa14.37□□□□□ -0.11
HPS4-218ENST00000519774 ADGRA1Q86SQ6 560 aa14.37□□□□□ -0.11
HPS4-218ENST00000519774 PI4K2BQ8TCG2 481 aa14.37□□□□□ -0.11
HPS4-218ENST00000519774 TMEM39BQ9GZU3 492 aa14.37□□□□□ -0.11
HPS4-218ENST00000519774 AATFQ9NY61 560 aaKnown RBP eCLIP14.37□□□□□ -0.11
HPS4-218ENST00000519774 PPP2R3BQ9Y5P8 575 aa14.37□□□□□ -0.11
HPS4-218ENST00000519774 CNTNAP1P78357 1384 aa14.36□□□□□ -0.11
HPS4-218ENST00000519774 PDE6AP16499 860 aa14.36□□□□□ -0.11
HPS4-218ENST00000519774 PDE1AP54750 535 aa14.36□□□□□ -0.11
HPS4-218ENST00000519774 TCP10Q12799 353 aa14.36□□□□□ -0.11
HPS4-218ENST00000519774 NFIAQ12857 509 aa14.36□□□□□ -0.11
HPS4-218ENST00000519774 TTLL12Q14166 644 aaPredicted RBP14.36□□□□□ -0.11
HPS4-218ENST00000519774 SLC9C2Q5TAH2 1124 aa14.36□□□□□ -0.11
HPS4-218ENST00000519774 MIGA1Q8NAN2 632 aa14.36□□□□□ -0.11
HPS4-218ENST00000519774 GBA2Q9HCG7 927 aaPredicted RBP14.36□□□□□ -0.11
HPS4-218ENST00000519774 SSC5DA1L4H1 1573 aa14.35□□□□□ -0.11
HPS4-218ENST00000519774 AK9Q5TCS8 1911 aa14.35□□□□□ -0.11
HPS4-218ENST00000519774 PAPPA2Q9BXP8 1791 aa14.35□□□□□ -0.11
HPS4-218ENST00000519774 IGSF3O75054 1194 aa14.35□□□□□ -0.11
HPS4-218ENST00000519774 BAG3O95817 575 aa14.35□□□□□ -0.11
HPS4-218ENST00000519774 RGS3P49796 1198 aa14.35□□□□□ -0.11
HPS4-218ENST00000519774 DYNLL1P63167 89 aaKnown RBP14.35□□□□□ -0.11
HPS4-218ENST00000519774 PICALMQ13492 652 aa14.35□□□□□ -0.11
HPS4-218ENST00000519774 PRKG1Q13976 671 aa14.35□□□□□ -0.11
HPS4-218ENST00000519774 FKBP1CQ5VVH2 108 aa14.35□□□□□ -0.11
HPS4-218ENST00000519774 TEX11Q8IYF3 940 aa14.35□□□□□ -0.11
HPS4-218ENST00000519774 C2orf69Q8N8R5 385 aa14.35□□□□□ -0.11
HPS4-218ENST00000519774 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.35□□□□□ -0.11
HPS4-218ENST00000519774 STAP2Q9UGK3 403 aa14.35□□□□□ -0.11
HPS4-218ENST00000519774 ZNF532Q9HCE3 1301 aa14.35□□□□□ -0.11
HPS4-218ENST00000519774 RFX7Q2KHR2 1363 aa14.34□□□□□ -0.11
HPS4-218ENST00000519774 CDK5RAP2Q96SN8 1893 aa14.34□□□□□ -0.11
HPS4-218ENST00000519774 RHBDL3P58872 404 aa14.34□□□□□ -0.11
HPS4-218ENST00000519774 NBPF12Q5TAG4 269 aaPredicted RBP14.34□□□□□ -0.11
HPS4-218ENST00000519774 PAXIP1Q6ZW49 1069 aaPredicted RBP14.34□□□□□ -0.11
HPS4-218ENST00000519774 FAM83AQ86UY5 434 aa14.34□□□□□ -0.11
HPS4-218ENST00000519774 PLEKHM2Q8IWE5 1019 aa14.34□□□□□ -0.11
HPS4-218ENST00000519774 CDAN1Q8IWY9 1227 aa14.34□□□□□ -0.11
HPS4-218ENST00000519774 KBTBD3Q8NAB2 608 aa14.34□□□□□ -0.11
HPS4-218ENST00000519774 SH3RF3Q8TEJ3 882 aaPredicted RBP14.34□□□□□ -0.11
HPS4-218ENST00000519774 CCDC136Q96JN2 1154 aa14.34□□□□□ -0.11
HPS4-218ENST00000519774 FAM198AQ9UFP1 575 aa14.34□□□□□ -0.11
HPS4-218ENST00000519774 MKRN1Q9UHC7 482 aaKnown RBP14.34□□□□□ -0.11
HPS4-218ENST00000519774 WDHD1O75717 1129 aaPredicted RBP14.33□□□□□ -0.12
HPS4-218ENST00000519774 PLCG2P16885 1265 aa14.33□□□□□ -0.12
HPS4-218ENST00000519774 ADD2P35612 726 aa14.33□□□□□ -0.12
HPS4-218ENST00000519774 HUNKP57058 714 aa14.33□□□□□ -0.12
HPS4-218ENST00000519774 SUPT20HL1Q3ZLR7 823 aa14.33□□□□□ -0.12
HPS4-218ENST00000519774 SLFNL1Q499Z3 407 aa14.33□□□□□ -0.12
HPS4-218ENST00000519774 ZSCAN25Q6NSZ9 544 aa14.33□□□□□ -0.12
HPS4-218ENST00000519774 MOB2Q70IA6 237 aa14.33□□□□□ -0.12
HPS4-218ENST00000519774 FAM151AQ8WW52 585 aa14.33□□□□□ -0.12
HPS4-218ENST00000519774 TEPSINQ96N21 525 aa14.33□□□□□ -0.12
HPS4-218ENST00000519774 FSD1Q9BTV5 496 aa14.33□□□□□ -0.12
HPS4-218ENST00000519774 IDI2Q9BXS1 227 aa14.33□□□□□ -0.12
HPS4-218ENST00000519774 DDX4Q9NQI0 724 aaKnown RBP14.33□□□□□ -0.12
HPS4-218ENST00000519774 FZD1Q9UP38 647 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms