RNA–Protein interactions for RNA: ENST00000519386.5

MRPS28-205, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-205ENST00000519386 A0A1B0GUL7 405 aa8.68□□□□□ -1.02
MRPS28-205ENST00000519386 YDJCA8MPS7 323 aa8.68□□□□□ -1.02
MRPS28-205ENST00000519386 FZD9O00144 591 aa8.68□□□□□ -1.02
MRPS28-205ENST00000519386 PDE8BO95263 885 aa8.68□□□□□ -1.02
MRPS28-205ENST00000519386 UBE4AQ14139 1066 aa8.68□□□□□ -1.02
MRPS28-205ENST00000519386 C15orf52Q6ZUT6 534 aaKnown RBP8.68□□□□□ -1.02
MRPS28-205ENST00000519386 KBTBD3Q8NAB2 608 aa8.68□□□□□ -1.02
MRPS28-205ENST00000519386 ZNF526Q8TF50 670 aaPredicted RBP8.68□□□□□ -1.02
MRPS28-205ENST00000519386 KCNB2Q92953 911 aa8.68□□□□□ -1.02
MRPS28-205ENST00000519386 DBNDD2Q9BQY9 259 aa8.68□□□□□ -1.02
MRPS28-205ENST00000519386 FSD1Q9BTV5 496 aa8.68□□□□□ -1.02
MRPS28-205ENST00000519386 LSG1Q9H089 658 aaKnown RBP8.68□□□□□ -1.02
MRPS28-205ENST00000519386 CCDC8Q9H0W5 538 aaPredicted RBP8.68□□□□□ -1.02
MRPS28-205ENST00000519386 ANTXR1Q9H6X2 564 aa8.68□□□□□ -1.02
MRPS28-205ENST00000519386 EMILIN3Q9NT22 766 aa8.68□□□□□ -1.02
MRPS28-205ENST00000519386 ZNRF3Q9ULT6 936 aa8.68□□□□□ -1.02
MRPS28-205ENST00000519386 CCDC171Q6TFL3 1326 aa8.68□□□□□ -1.02
MRPS28-205ENST00000519386 ZC3H4Q9UPT8 1303 aaKnown RBP8.68□□□□□ -1.02
MRPS28-205ENST00000519386 ECE2O60344 883 aa8.67□□□□□ -1.02
MRPS28-205ENST00000519386 RAD17O75943 681 aa8.67□□□□□ -1.02
MRPS28-205ENST00000519386 ZFYP08048 801 aaPredicted RBP8.67□□□□□ -1.02
MRPS28-205ENST00000519386 CAMK2BQ13554 666 aa8.67□□□□□ -1.02
MRPS28-205ENST00000519386 PSME4Q14997 1843 aa8.67□□□□□ -1.02
MRPS28-205ENST00000519386 PUM3Q15397 648 aaKnown RBP8.67□□□□□ -1.02
MRPS28-205ENST00000519386 ATP2B3Q16720 1220 aa8.67□□□□□ -1.02
MRPS28-205ENST00000519386 CCDC158Q5M9N0 1113 aa8.67□□□□□ -1.02
MRPS28-205ENST00000519386 KCNQ5Q9NR82 932 aa8.67□□□□□ -1.02
MRPS28-205ENST00000519386 HMG20BQ9P0W2 317 aa8.67□□□□□ -1.02
MRPS28-205ENST00000519386 RPAP1Q9BWH6 1393 aaPredicted RBP8.66□□□□□ -1.02
MRPS28-205ENST00000519386 GLTPD2A6NH11 291 aa8.66□□□□□ -1.02
MRPS28-205ENST00000519386 DDNO94850 711 aaPredicted RBP8.66□□□□□ -1.02
MRPS28-205ENST00000519386 UQCRFS1P1P0C7P4 283 aa8.66□□□□□ -1.02
MRPS28-205ENST00000519386 SLC5A1P13866 664 aa8.66□□□□□ -1.02
MRPS28-205ENST00000519386 FGFR2P21802 821 aa8.66□□□□□ -1.02
MRPS28-205ENST00000519386 ARID4AP29374 1257 aaPredicted RBP8.66□□□□□ -1.02
MRPS28-205ENST00000519386 DDIT3P35638 169 aa8.66□□□□□ -1.02
MRPS28-205ENST00000519386 GYG1P46976 350 aa8.66□□□□□ -1.02
MRPS28-205ENST00000519386 EIF6P56537 245 aaKnown RBP8.66□□□□□ -1.02
MRPS28-205ENST00000519386 CXCL9Q07325 125 aa8.66□□□□□ -1.02
MRPS28-205ENST00000519386 RNF20Q5VTR2 975 aa8.66□□□□□ -1.02
MRPS28-205ENST00000519386 ZNF784Q8NCA9 323 aaPredicted RBP8.66□□□□□ -1.02
MRPS28-205ENST00000519386 TM6SF1Q9BZW5 370 aa8.66□□□□□ -1.02
MRPS28-205ENST00000519386 COA1Q9GZY4 146 aa8.66□□□□□ -1.02
MRPS28-205ENST00000519386 BCL11AQ9H165 835 aa8.66□□□□□ -1.02
MRPS28-205ENST00000519386 BOLA2Q9H3K6 86 aa8.66□□□□□ -1.02
MRPS28-205ENST00000519386 PLSCR2Q9NRY7 297 aa8.66□□□□□ -1.02
MRPS28-205ENST00000519386 PAG1Q9NWQ8 432 aa8.66□□□□□ -1.02
MRPS28-205ENST00000519386 GJA3Q9Y6H8 435 aa8.66□□□□□ -1.02
MRPS28-205ENST00000519386 ZNF646O15015 1829 aaPredicted RBP8.66□□□□□ -1.02
MRPS28-205ENST00000519386 PSMD14O00487 310 aa8.65□□□□□ -1.02
MRPS28-205ENST00000519386 IGSF3O75054 1194 aa8.65□□□□□ -1.02
MRPS28-205ENST00000519386 IFIT1P09914 478 aaKnown RBP8.65□□□□□ -1.02
MRPS28-205ENST00000519386 ADORA1P30542 326 aa8.65□□□□□ -1.02
MRPS28-205ENST00000519386 NMIQ13287 307 aaPredicted RBP8.65□□□□□ -1.02
MRPS28-205ENST00000519386 TTF1Q15361 905 aaPredicted RBP8.65□□□□□ -1.02
MRPS28-205ENST00000519386 TSGA10IPQ3SY00 556 aa8.65□□□□□ -1.02
MRPS28-205ENST00000519386 CIAPIN1Q6FI81 312 aa8.65□□□□□ -1.02
MRPS28-205ENST00000519386 TMED8Q6PL24 325 aaPredicted RBP8.65□□□□□ -1.02
MRPS28-205ENST00000519386 CWC27Q6UX04 472 aaKnown RBP8.65□□□□□ -1.02
MRPS28-205ENST00000519386 ZNF804AQ7Z570 1209 aa8.65□□□□□ -1.02
MRPS28-205ENST00000519386 LPIN2Q92539 896 aa8.65□□□□□ -1.02
MRPS28-205ENST00000519386 MAP4K1Q92918 833 aa8.65□□□□□ -1.02
MRPS28-205ENST00000519386 XAGE2Q96GT9 111 aa8.65□□□□□ -1.02
MRPS28-205ENST00000519386 FAM84BQ96KN1 310 aaPredicted RBP8.65□□□□□ -1.02
MRPS28-205ENST00000519386 IL25Q9H293 177 aa8.65□□□□□ -1.02
MRPS28-205ENST00000519386 CD209Q9NNX6 404 aa8.65□□□□□ -1.02
MRPS28-205ENST00000519386 NMRK2Q9NPI5 230 aa8.65□□□□□ -1.02
MRPS28-205ENST00000519386 HELLSQ9NRZ9 838 aa8.65□□□□□ -1.02
MRPS28-205ENST00000519386 CHMP5Q9NZZ3 219 aa8.65□□□□□ -1.02
MRPS28-205ENST00000519386 LAMB1P07942 1786 aa8.65□□□□□ -1.02
MRPS28-205ENST00000519386 WDR90Q96KV7 1748 aa8.65□□□□□ -1.03
MRPS28-205ENST00000519386 PDS5AQ29RF7 1337 aaKnown RBP8.64□□□□□ -1.03
MRPS28-205ENST00000519386 A0A0D9SFI3 127 aa8.64□□□□□ -1.03
MRPS28-205ENST00000519386 MAP4K4O95819 1239 aaPredicted RBP8.64□□□□□ -1.03
MRPS28-205ENST00000519386 ZKSCAN1P17029 563 aaPredicted RBP8.64□□□□□ -1.03
MRPS28-205ENST00000519386 HIBADHP31937 336 aaKnown RBP8.64□□□□□ -1.03
MRPS28-205ENST00000519386 BCAMP50895 628 aa8.64□□□□□ -1.03
MRPS28-205ENST00000519386 TIMM10P62072 90 aa8.64□□□□□ -1.03
MRPS28-205ENST00000519386 KRT32Q14532 448 aa8.64□□□□□ -1.03
MRPS28-205ENST00000519386 TNIP1Q15025 636 aa8.64□□□□□ -1.03
MRPS28-205ENST00000519386 TTC39AQ5SRH9 613 aa8.64□□□□□ -1.03
MRPS28-205ENST00000519386 GORABQ5T7V8 394 aa8.64□□□□□ -1.03
MRPS28-205ENST00000519386 ZSCAN25Q6NSZ9 544 aa8.64□□□□□ -1.03
MRPS28-205ENST00000519386 PODNQ7Z5L7 613 aa8.64□□□□□ -1.03
MRPS28-205ENST00000519386 FBXO33Q7Z6M2 555 aa8.64□□□□□ -1.03
MRPS28-205ENST00000519386 GPC2Q8N158 579 aa8.64□□□□□ -1.03
MRPS28-205ENST00000519386 FBXW7Q969H0 707 aa8.64□□□□□ -1.03
MRPS28-205ENST00000519386 NEUROD6Q96NK8 337 aa8.64□□□□□ -1.03
MRPS28-205ENST00000519386 GPBP1L1Q9HC44 474 aaPredicted RBP8.64□□□□□ -1.03
MRPS28-205ENST00000519386 IQSEC3Q9UPP2 1182 aaPredicted RBP8.64□□□□□ -1.03
MRPS28-205ENST00000519386 USP17L3A6NCW0 530 aa8.63□□□□□ -1.03
MRPS28-205ENST00000519386 USP17L4A6NCW7 530 aa8.63□□□□□ -1.03
MRPS28-205ENST00000519386 POTECB2RU33 542 aa8.63□□□□□ -1.03
MRPS28-205ENST00000519386 VIL1P09327 827 aaKnown RBP8.63□□□□□ -1.03
MRPS28-205ENST00000519386 IL1R1P14778 569 aa8.63□□□□□ -1.03
MRPS28-205ENST00000519386 PHKA1P46020 1223 aa8.63□□□□□ -1.03
MRPS28-205ENST00000519386 SLC4A3P48751 1232 aa8.63□□□□□ -1.03
MRPS28-205ENST00000519386 GMPSP49915 693 aaPredicted RBP8.63□□□□□ -1.03
MRPS28-205ENST00000519386 GTF2IP78347 998 aa8.63□□□□□ -1.03
MRPS28-205ENST00000519386 NECTIN1Q15223 517 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms