RNA–Protein interactions for RNA: ENST00000518959.1

ATP6V1C1-204, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

TSL 2

Gene ATP6V1C1, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-204ENST00000518959 PCDH1Q08174 1060 aa6.29□□□□□ -1.4
ATP6V1C1-204ENST00000518959 CDK5R2Q13319 367 aa6.29□□□□□ -1.4
ATP6V1C1-204ENST00000518959 IFI16Q16666 785 aaKnown RBP6.29□□□□□ -1.4
ATP6V1C1-204ENST00000518959 ANGEL2Q5VTE6 544 aaKnown RBP6.29□□□□□ -1.4
ATP6V1C1-204ENST00000518959 CILP2Q8IUL8 1156 aa6.29□□□□□ -1.4
ATP6V1C1-204ENST00000518959 SIAH1Q8IUQ4 282 aa6.29□□□□□ -1.4
ATP6V1C1-204ENST00000518959 LMCD1Q9NZU5 365 aa6.29□□□□□ -1.4
ATP6V1C1-204ENST00000518959 SLC23A3Q6PIS1 610 aa6.28□□□□□ -1.4
ATP6V1C1-204ENST00000518959 DDX54Q8TDD1 881 aaKnown RBP6.28□□□□□ -1.4
ATP6V1C1-204ENST00000518959 MZF1P28698 734 aaPredicted RBP6.27□□□□□ -1.41
ATP6V1C1-204ENST00000518959 ELOAQ14241 798 aaKnown RBP6.27□□□□□ -1.41
ATP6V1C1-204ENST00000518959 PDE3AQ14432 1141 aa6.27□□□□□ -1.41
ATP6V1C1-204ENST00000518959 ECM1Q16610 540 aa6.27□□□□□ -1.41
ATP6V1C1-204ENST00000518959 NOM1Q5C9Z4 860 aaKnown RBP6.27□□□□□ -1.41
ATP6V1C1-204ENST00000518959 SYDE1Q6ZW31 735 aaPredicted RBP6.27□□□□□ -1.41
ATP6V1C1-204ENST00000518959 C1QL4Q86Z23 238 aa6.27□□□□□ -1.41
ATP6V1C1-204ENST00000518959 FLAD1Q8NFF5 587 aa6.27□□□□□ -1.41
ATP6V1C1-204ENST00000518959 SNX29Q8TEQ0 813 aa6.27□□□□□ -1.41
ATP6V1C1-204ENST00000518959 LIN37Q96GY3 246 aaPredicted RBP6.27□□□□□ -1.41
ATP6V1C1-204ENST00000518959 CLEC4MQ9H2X3 399 aaPredicted RBP6.27□□□□□ -1.41
ATP6V1C1-204ENST00000518959 PIDD1Q9HB75 910 aa6.27□□□□□ -1.41
ATP6V1C1-204ENST00000518959 LATS2Q9NRM7 1088 aa6.27□□□□□ -1.41
ATP6V1C1-204ENST00000518959 TMEM265A0A087WTH1 108 aa6.26□□□□□ -1.41
ATP6V1C1-204ENST00000518959 ZNF503-AS2A6NEH8 195 aa6.26□□□□□ -1.41
ATP6V1C1-204ENST00000518959 TNFRSF21O75509 655 aa6.26□□□□□ -1.41
ATP6V1C1-204ENST00000518959 ZNF423Q2M1K9 1284 aa6.26□□□□□ -1.41
ATP6V1C1-204ENST00000518959 GSX1Q9H4S2 264 aaPredicted RBP6.26□□□□□ -1.41
ATP6V1C1-204ENST00000518959 PRDM7Q9NQW5 492 aa6.26□□□□□ -1.41
ATP6V1C1-204ENST00000518959 CRIM1Q9NZV1 1036 aa6.26□□□□□ -1.41
ATP6V1C1-204ENST00000518959 SEPT3Q9UH03 358 aa6.26□□□□□ -1.41
ATP6V1C1-204ENST00000518959 A0A096LPE4 126 aa6.25□□□□□ -1.41
ATP6V1C1-204ENST00000518959 A0A1W2PPZ6 126 aa6.25□□□□□ -1.41
ATP6V1C1-204ENST00000518959 AOC2O75106 756 aa6.25□□□□□ -1.41
ATP6V1C1-204ENST00000518959 ECEL1O95672 775 aa6.25□□□□□ -1.41
ATP6V1C1-204ENST00000518959 PEAR1Q5VY43 1037 aaPredicted RBP6.25□□□□□ -1.41
ATP6V1C1-204ENST00000518959 MPZL3Q6UWV2 235 aa6.25□□□□□ -1.41
ATP6V1C1-204ENST00000518959 TTLL10Q6ZVT0 673 aa6.25□□□□□ -1.41
ATP6V1C1-204ENST00000518959 AMOTL2Q9Y2J4 779 aa6.25□□□□□ -1.41
ATP6V1C1-204ENST00000518959 NFIBO00712 420 aa6.24□□□□□ -1.41
ATP6V1C1-204ENST00000518959 CEACAM5P06731 702 aa6.24□□□□□ -1.41
ATP6V1C1-204ENST00000518959 ITIH2P19823 946 aa6.24□□□□□ -1.41
ATP6V1C1-204ENST00000518959 AAMPQ13685 434 aa6.24□□□□□ -1.41
ATP6V1C1-204ENST00000518959 FOXD3Q9UJU5 478 aaPredicted RBP6.24□□□□□ -1.41
ATP6V1C1-204ENST00000518959 PPP1R9AQ9ULJ8 1098 aa6.24□□□□□ -1.41
ATP6V1C1-204ENST00000518959 WDR18Q9BV38 432 aa6.23□□□□□ -1.41
ATP6V1C1-204ENST00000518959 MKNK2Q9HBH9 465 aa6.23□□□□□ -1.41
ATP6V1C1-204ENST00000518959 POLIQ9UNA4 740 aa6.23□□□□□ -1.41
ATP6V1C1-204ENST00000518959 U3KQE9 123 aa6.23□□□□□ -1.41
ATP6V1C1-204ENST00000518959 RNGTTO60942 597 aaKnown RBP6.22□□□□□ -1.41
ATP6V1C1-204ENST00000518959 AFMP43652 599 aa6.22□□□□□ -1.41
ATP6V1C1-204ENST00000518959 EIF1AXP47813 144 aaKnown RBP6.22□□□□□ -1.41
ATP6V1C1-204ENST00000518959 EHHADHQ08426 723 aa6.22□□□□□ -1.41
ATP6V1C1-204ENST00000518959 IKZF1Q13422 519 aa6.22□□□□□ -1.41
ATP6V1C1-204ENST00000518959 SPRED3Q2MJR0 410 aa6.22□□□□□ -1.41
ATP6V1C1-204ENST00000518959 TMEM164Q5U3C3 297 aa6.22□□□□□ -1.41
ATP6V1C1-204ENST00000518959 PRR23BQ6ZRT6 265 aa6.22□□□□□ -1.41
ATP6V1C1-204ENST00000518959 HELQQ8TDG4 1101 aa6.22□□□□□ -1.41
ATP6V1C1-204ENST00000518959 CLP1Q92989 425 aaKnown RBP6.22□□□□□ -1.41
ATP6V1C1-204ENST00000518959 TRIM56Q9BRZ2 755 aaKnown RBP6.22□□□□□ -1.41
ATP6V1C1-204ENST00000518959 RAPGEFL1Q9UHV5 662 aa6.22□□□□□ -1.41
ATP6V1C1-204ENST00000518959 LEFTY1O75610 366 aa6.21□□□□□ -1.42
ATP6V1C1-204ENST00000518959 POLR3DP05423 398 aaPredicted RBP6.21□□□□□ -1.42
ATP6V1C1-204ENST00000518959 C1QTNF9P0C862 333 aa6.21□□□□□ -1.42
ATP6V1C1-204ENST00000518959 PRKCSHP14314 528 aaPredicted RBP6.21□□□□□ -1.42
ATP6V1C1-204ENST00000518959 OXCT1P55809 520 aa6.21□□□□□ -1.42
ATP6V1C1-204ENST00000518959 CTSWP56202 376 aa6.21□□□□□ -1.42
ATP6V1C1-204ENST00000518959 ZP2Q05996 745 aa6.21□□□□□ -1.42
ATP6V1C1-204ENST00000518959 SMYD4Q8IYR2 804 aaPredicted RBP6.21□□□□□ -1.42
ATP6V1C1-204ENST00000518959 KRTAP9-3Q9BYQ3 159 aa6.21□□□□□ -1.42
ATP6V1C1-204ENST00000518959 ATXN3LQ9H3M9 355 aa6.21□□□□□ -1.42
ATP6V1C1-204ENST00000518959 INHBBP09529 407 aa6.2□□□□□ -1.42
ATP6V1C1-204ENST00000518959 SLFN14P0C7P3 912 aa6.2□□□□□ -1.42
ATP6V1C1-204ENST00000518959 ATP2B4P23634 1241 aa6.2□□□□□ -1.42
ATP6V1C1-204ENST00000518959 MPSTP25325 297 aa6.2□□□□□ -1.42
ATP6V1C1-204ENST00000518959 ALKBH2Q6NS38 261 aa6.2□□□□□ -1.42
ATP6V1C1-204ENST00000518959 CCNJLQ8IV13 435 aa6.2□□□□□ -1.42
ATP6V1C1-204ENST00000518959 ASB11Q8WXH4 323 aa6.2□□□□□ -1.42
ATP6V1C1-204ENST00000518959 KRTAP17-1Q9BYP8 105 aa6.2□□□□□ -1.42
ATP6V1C1-204ENST00000518959 LIN7BQ9HAP6 207 aa6.2□□□□□ -1.42
ATP6V1C1-204ENST00000518959 PLAGL2Q9UPG8 496 aa6.2□□□□□ -1.42
ATP6V1C1-204ENST00000518959 ABCC9O60706 1549 aa6.2□□□□□ -1.42
ATP6V1C1-204ENST00000518959 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.19□□□□□ -1.42
ATP6V1C1-204ENST00000518959 NPIPB6E9PJ23 425 aa6.19□□□□□ -1.42
ATP6V1C1-204ENST00000518959 TMPRSS2O15393 492 aa6.19□□□□□ -1.42
ATP6V1C1-204ENST00000518959 GLI1P08151 1106 aa6.19□□□□□ -1.42
ATP6V1C1-204ENST00000518959 LIG1P18858 919 aa6.19□□□□□ -1.42
ATP6V1C1-204ENST00000518959 GRIA4P48058 902 aa6.19□□□□□ -1.42
ATP6V1C1-204ENST00000518959 TMEM67Q5HYA8 995 aa6.19□□□□□ -1.42
ATP6V1C1-204ENST00000518959 FYB2Q5VWT5 728 aa6.19□□□□□ -1.42
ATP6V1C1-204ENST00000518959 DUSP23Q9BVJ7 150 aa6.19□□□□□ -1.42
ATP6V1C1-204ENST00000518959 ZNF777Q9ULD5 760 aaPredicted RBP6.19□□□□□ -1.42
ATP6V1C1-204ENST00000518959 CTNND2Q9UQB3 1225 aa6.19□□□□□ -1.42
ATP6V1C1-204ENST00000518959 SNX11Q9Y5W9 270 aa6.19□□□□□ -1.42
ATP6V1C1-204ENST00000518959 SYNGAP1Q96PV0 1343 aa6.19□□□□□ -1.42
ATP6V1C1-204ENST00000518959 B3GALT4O96024 378 aa6.18□□□□□ -1.42
ATP6V1C1-204ENST00000518959 TMEM253P0C7T8 217 aa6.18□□□□□ -1.42
ATP6V1C1-204ENST00000518959 USP5P45974 858 aa6.18□□□□□ -1.42
ATP6V1C1-204ENST00000518959 ID3Q02535 119 aa6.18□□□□□ -1.42
ATP6V1C1-204ENST00000518959 KIRREL1Q96J84 757 aa6.18□□□□□ -1.42
ATP6V1C1-204ENST00000518959 FANCD2OSQ96PS1 177 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms