RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 GPSM3Q9Y4H4 160 aa8.22□□□□□ -1.09
PABPC1-207ENST00000518716 COL11A2P13942 1736 aaPredicted RBP8.22□□□□□ -1.09
PABPC1-207ENST00000518716 KLRG2A4D1S0 409 aaPredicted RBP8.21□□□□□ -1.1
PABPC1-207ENST00000518716 IQCA1LA6NCM1 817 aa8.21□□□□□ -1.1
PABPC1-207ENST00000518716 ATP5J2-PTCD1G3V325 749 aa8.21□□□□□ -1.1
PABPC1-207ENST00000518716 MEN1O00255 615 aa8.21□□□□□ -1.1
PABPC1-207ENST00000518716 TRIM66O15016 1216 aa8.21□□□□□ -1.1
PABPC1-207ENST00000518716 NBPF10Q6P3W6 841 aaKnown RBP8.21□□□□□ -1.1
PABPC1-207ENST00000518716 NBPF15Q8N660 670 aa8.21□□□□□ -1.1
PABPC1-207ENST00000518716 CNKSR1Q969H4 720 aa8.21□□□□□ -1.1
PABPC1-207ENST00000518716 ZNF622Q969S3 477 aaKnown RBP eCLIP8.21□□□□□ -1.1
PABPC1-207ENST00000518716 UBR2Q8IWV8 1755 aa8.2□□□□□ -1.1
PABPC1-207ENST00000518716 A0A087WZG4 1122 aa8.2□□□□□ -1.1
PABPC1-207ENST00000518716 A0A1W2PRU2 124 aa8.2□□□□□ -1.1
PABPC1-207ENST00000518716 DOC2BQ14184 412 aa8.2□□□□□ -1.1
PABPC1-207ENST00000518716 FOXD4L6Q3SYB3 417 aaPredicted RBP8.2□□□□□ -1.1
PABPC1-207ENST00000518716 PRPF40BQ6NWY9 871 aaKnown RBP8.2□□□□□ -1.1
PABPC1-207ENST00000518716 FOXD4L3Q6VB84 417 aaPredicted RBP8.2□□□□□ -1.1
PABPC1-207ENST00000518716 BICDL1Q6ZP65 573 aa8.2□□□□□ -1.1
PABPC1-207ENST00000518716 CFHR5Q9BXR6 569 aa8.2□□□□□ -1.1
PABPC1-207ENST00000518716 SNED1Q8TER0 1413 aa8.2□□□□□ -1.1
PABPC1-207ENST00000518716 FZD9O00144 591 aa8.19□□□□□ -1.1
PABPC1-207ENST00000518716 CAMTA2O94983 1202 aa8.19□□□□□ -1.1
PABPC1-207ENST00000518716 CANXP27824 592 aaKnown RBP8.19□□□□□ -1.1
PABPC1-207ENST00000518716 CLK2P49760 499 aaKnown RBP8.19□□□□□ -1.1
PABPC1-207ENST00000518716 DEFB115Q30KQ5 88 aa8.19□□□□□ -1.1
PABPC1-207ENST00000518716 SOGA3Q5TF21 947 aa8.19□□□□□ -1.1
PABPC1-207ENST00000518716 AIDAQ96BJ3 306 aa8.19□□□□□ -1.1
PABPC1-207ENST00000518716 MASTLQ96GX5 879 aa8.19□□□□□ -1.1
PABPC1-207ENST00000518716 ZNF496Q96IT1 587 aaPredicted RBP8.19□□□□□ -1.1
PABPC1-207ENST00000518716 PANK3Q9H999 370 aa8.19□□□□□ -1.1
PABPC1-207ENST00000518716 GDF2Q9UK05 429 aaPredicted RBP8.19□□□□□ -1.1
PABPC1-207ENST00000518716 WDR33Q9C0J8 1336 aaKnown RBP8.19□□□□□ -1.1
PABPC1-207ENST00000518716 ZNF541Q9H0D2 1346 aa8.19□□□□□ -1.1
PABPC1-207ENST00000518716 ARFGEF2Q9Y6D5 1785 aa8.18□□□□□ -1.1
PABPC1-207ENST00000518716 STARD3NLO95772 234 aa8.18□□□□□ -1.1
PABPC1-207ENST00000518716 EPHX2P34913 555 aa8.18□□□□□ -1.1
PABPC1-207ENST00000518716 IL6STP40189 918 aaPredicted RBP8.18□□□□□ -1.1
PABPC1-207ENST00000518716 MAP2K1Q02750 393 aaPredicted RBP8.18□□□□□ -1.1
PABPC1-207ENST00000518716 MTHFSDQ2M296 383 aaKnown RBP8.18□□□□□ -1.1
PABPC1-207ENST00000518716 CNTROBQ8N137 903 aa8.18□□□□□ -1.1
PABPC1-207ENST00000518716 GRIP2Q9C0E4 1043 aa8.18□□□□□ -1.1
PABPC1-207ENST00000518716 TIMELESSQ9UNS1 1208 aa8.18□□□□□ -1.1
PABPC1-207ENST00000518716 TBC1D2BQ9UPU7 963 aa8.18□□□□□ -1.1
PABPC1-207ENST00000518716 THSD7BQ9C0I4 1608 aa8.18□□□□□ -1.1
PABPC1-207ENST00000518716 GNB5O14775 395 aa8.17□□□□□ -1.1
PABPC1-207ENST00000518716 F11P03951 625 aa8.17□□□□□ -1.1
PABPC1-207ENST00000518716 FKBP4Q02790 459 aaKnown RBP eCLIP8.17□□□□□ -1.1
PABPC1-207ENST00000518716 MLLT1Q03111 559 aaPredicted RBP8.17□□□□□ -1.1
PABPC1-207ENST00000518716 MAP1SQ66K74 1059 aaPredicted RBP8.17□□□□□ -1.1
PABPC1-207ENST00000518716 DZIP3Q86Y13 1208 aaKnown RBP8.17□□□□□ -1.1
PABPC1-207ENST00000518716 IL17REQ8NFR9 667 aa8.17□□□□□ -1.1
PABPC1-207ENST00000518716 SETDB2Q96T68 719 aa8.17□□□□□ -1.1
PABPC1-207ENST00000518716 SLC24A3Q9HC58 644 aa8.17□□□□□ -1.1
PABPC1-207ENST00000518716 TIMMDC1Q9NPL8 285 aa8.17□□□□□ -1.1
PABPC1-207ENST00000518716 HACL1Q9UJ83 578 aa8.17□□□□□ -1.1
PABPC1-207ENST00000518716 SCN7AQ01118 1682 aa8.17□□□□□ -1.1
PABPC1-207ENST00000518716 SPATA31C2B4DYI2 1134 aa8.16□□□□□ -1.1
PABPC1-207ENST00000518716 A1BGP04217 495 aa8.16□□□□□ -1.1
PABPC1-207ENST00000518716 CACNA1SQ13698 1873 aa8.16□□□□□ -1.1
PABPC1-207ENST00000518716 UBAP2LQ14157 1087 aaKnown RBP8.16□□□□□ -1.1
PABPC1-207ENST00000518716 CCDC93Q567U6 631 aa8.16□□□□□ -1.1
PABPC1-207ENST00000518716 CST9Q5W186 159 aa8.16□□□□□ -1.1
PABPC1-207ENST00000518716 PPP2R2DQ66LE6 453 aa8.16□□□□□ -1.1
PABPC1-207ENST00000518716 ZNF790Q6PG37 636 aa8.16□□□□□ -1.1
PABPC1-207ENST00000518716 OLFM4Q6UX06 510 aa8.16□□□□□ -1.1
PABPC1-207ENST00000518716 PNMA8AQ86V59 439 aaPredicted RBP8.16□□□□□ -1.1
PABPC1-207ENST00000518716 MORC1Q86VD1 984 aa8.16□□□□□ -1.1
PABPC1-207ENST00000518716 KRTAP19-1Q8IUB9 90 aa8.16□□□□□ -1.1
PABPC1-207ENST00000518716 GOLGA6L1Q8N7Z2 621 aa8.16□□□□□ -1.1
PABPC1-207ENST00000518716 CNBD1Q8NA66 436 aa8.16□□□□□ -1.1
PABPC1-207ENST00000518716 TEX13AQ9BXU3 409 aaPredicted RBP8.16□□□□□ -1.1
PABPC1-207ENST00000518716 DDX21Q9NR30 783 aaKnown RBP eCLIP8.16□□□□□ -1.1
PABPC1-207ENST00000518716 ZNF277Q9NRM2 450 aaPredicted RBP8.16□□□□□ -1.1
PABPC1-207ENST00000518716 HEG1Q9ULI3 1381 aa8.16□□□□□ -1.1
PABPC1-207ENST00000518716 KRTAP4-8A0A0G2JLE6 195 aa8.15□□□□□ -1.1
PABPC1-207ENST00000518716 NPR1P16066 1061 aa8.15□□□□□ -1.1
PABPC1-207ENST00000518716 AMPD1P23109 780 aa8.15□□□□□ -1.1
PABPC1-207ENST00000518716 EAPPQ56P03 285 aaPredicted RBP8.15□□□□□ -1.1
PABPC1-207ENST00000518716 WDR44Q5JSH3 913 aa8.15□□□□□ -1.1
PABPC1-207ENST00000518716 CLEC4GQ6UXB4 293 aa8.15□□□□□ -1.1
PABPC1-207ENST00000518716 GPC2Q8N158 579 aa8.15□□□□□ -1.1
PABPC1-207ENST00000518716 EPS8L1Q8TE68 723 aa8.15□□□□□ -1.1
PABPC1-207ENST00000518716 LTBP1Q14766 1721 aa8.15□□□□□ -1.11
PABPC1-207ENST00000518716 COL4A5P29400 1685 aa8.14□□□□□ -1.11
PABPC1-207ENST00000518716 CEMIPQ8WUJ3 1361 aa8.14□□□□□ -1.11
PABPC1-207ENST00000518716 RNF123Q5XPI4 1314 aa8.14□□□□□ -1.11
PABPC1-207ENST00000518716 C2CD2LO14523 706 aa8.14□□□□□ -1.11
PABPC1-207ENST00000518716 HMOX1P09601 288 aa8.14□□□□□ -1.11
PABPC1-207ENST00000518716 IARSP41252 1262 aaKnown RBP8.14□□□□□ -1.11
PABPC1-207ENST00000518716 DGKGP49619 791 aa8.14□□□□□ -1.11
PABPC1-207ENST00000518716 ST5P78524 1137 aa8.14□□□□□ -1.11
PABPC1-207ENST00000518716 FMR1Q06787 632 aaKnown RBP eCLIP8.14□□□□□ -1.117e-17■■■■■ 61.9
PABPC1-207ENST00000518716 RTKN2Q8IZC4 609 aa8.14□□□□□ -1.11
PABPC1-207ENST00000518716 CAPNS2Q96L46 248 aa8.14□□□□□ -1.11
PABPC1-207ENST00000518716 PSMD1Q99460 953 aa8.14□□□□□ -1.11
PABPC1-207ENST00000518716 POLR3EQ9NVU0 708 aa8.14□□□□□ -1.11
PABPC1-207ENST00000518716 SIPA1L3O60292 1781 aaPredicted RBP8.13□□□□□ -1.11
PABPC1-207ENST00000518716 CCDC85CA6NKD9 419 aa8.13□□□□□ -1.11
PABPC1-207ENST00000518716 KCNQ3O43525 872 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms