RNA–Protein interactions for RNA: ENST00000518711.1

SPIDR-208, Transcript of scaffold protein involved in DNA repair, human

TSL 3

Gene SPIDR, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-208	ENST00000518711	HDLBP	Q00341	1268 aa	Known RBP	7.23	□□□□□ -1.25
SPIDR-208	ENST00000518711	POLA2	Q14181	598 aa		7.23	□□□□□ -1.25
SPIDR-208	ENST00000518711	GRIN2C	Q14957	1233 aa		7.23	□□□□□ -1.25
SPIDR-208	ENST00000518711	FKBP1C	Q5VVH2	108 aa		7.23	□□□□□ -1.25
SPIDR-208	ENST00000518711	ZNF804A	Q7Z570	1209 aa		7.23	□□□□□ -1.25
SPIDR-208	ENST00000518711	RAET1E	Q8TD07	263 aa		7.23	□□□□□ -1.25
SPIDR-208	ENST00000518711	DIS3L	Q8TF46	1054 aa	Known RBP	7.23	□□□□□ -1.25
SPIDR-208	ENST00000518711	PRMT6	Q96LA8	375 aa	Predicted RBP	7.23	□□□□□ -1.25
SPIDR-208	ENST00000518711	UIMC1	Q96RL1	719 aa		7.23	□□□□□ -1.25
SPIDR-208	ENST00000518711	MPHOSPH8	Q99549	860 aa		7.23	□□□□□ -1.25
SPIDR-208	ENST00000518711	MXD3	Q9BW11	206 aa		7.23	□□□□□ -1.25
SPIDR-208	ENST00000518711	UNC93B1	Q9H1C4	597 aa		7.23	□□□□□ -1.25
SPIDR-208	ENST00000518711	PHAX	Q9H814	394 aa	Known RBP	7.23	□□□□□ -1.25
SPIDR-208	ENST00000518711	MBIP	Q9NS73	344 aa		7.23	□□□□□ -1.25
SPIDR-208	ENST00000518711	SCAF8	Q9UPN6	1271 aa	Known RBP	7.23	□□□□□ -1.25
SPIDR-208	ENST00000518711	KMT2B	Q9UMN6	2715 aa	Predicted RBP	7.23	□□□□□ -1.25
SPIDR-208	ENST00000518711	TCF20	Q9UGU0	1960 aa	Known RBP	7.22	□□□□□ -1.25
SPIDR-208	ENST00000518711	PI4K2B	G5E9Z4	385 aa		7.22	□□□□□ -1.25
SPIDR-208	ENST00000518711	SMAD3	P84022	425 aa	Known RBP	7.22	□□□□□ -1.25
SPIDR-208	ENST00000518711	PRKG1	Q13976	671 aa		7.22	□□□□□ -1.25
SPIDR-208	ENST00000518711	RASA3	Q14644	834 aa		7.22	□□□□□ -1.25
SPIDR-208	ENST00000518711	TAF1C	Q15572	869 aa	Predicted RBP	7.22	□□□□□ -1.25
SPIDR-208	ENST00000518711	CFAP100	Q494V2	611 aa		7.22	□□□□□ -1.25
SPIDR-208	ENST00000518711	SPDYE2	Q495Y8	402 aa		7.22	□□□□□ -1.25
SPIDR-208	ENST00000518711	NBPF12	Q5TAG4	269 aa	Predicted RBP	7.22	□□□□□ -1.25
SPIDR-208	ENST00000518711	POTEE	Q6S8J3	1075 aa		7.22	□□□□□ -1.25
SPIDR-208	ENST00000518711	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	7.22	□□□□□ -1.25
SPIDR-208	ENST00000518711	ERO1B	Q86YB8	467 aa		7.22	□□□□□ -1.25
SPIDR-208	ENST00000518711	CERS5	Q8N5B7	392 aa		7.22	□□□□□ -1.25
SPIDR-208	ENST00000518711	BRI3BP	Q8WY22	251 aa		7.22	□□□□□ -1.25
SPIDR-208	ENST00000518711	KHSRP	Q92945	711 aa	Known RBP eCLIP	7.22	□□□□□ -1.25
SPIDR-208	ENST00000518711	OPTN	Q96CV9	577 aa		7.22	□□□□□ -1.25
SPIDR-208	ENST00000518711	TEPSIN	Q96N21	525 aa		7.22	□□□□□ -1.25
SPIDR-208	ENST00000518711	DEFB118	Q96PH6	123 aa		7.22	□□□□□ -1.25
SPIDR-208	ENST00000518711	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	7.22	□□□□□ -1.25
SPIDR-208	ENST00000518711	TAOK2	Q9UL54	1235 aa		7.22	□□□□□ -1.25
SPIDR-208	ENST00000518711	MAP3K2	Q9Y2U5	619 aa		7.22	□□□□□ -1.25
SPIDR-208	ENST00000518711	LAS1L	Q9Y4W2	734 aa	Known RBP	7.22	□□□□□ -1.25
SPIDR-208	ENST00000518711	MYH3	P11055	1940 aa		7.21	□□□□□ -1.25
SPIDR-208	ENST00000518711	CCL15-CCL14	A0A0B4J2E2	113 aa		7.21	□□□□□ -1.26
SPIDR-208	ENST00000518711	PI4KAP2	A4QPH2	592 aa		7.21	□□□□□ -1.26
SPIDR-208	ENST00000518711	SPDYE5	A6NIY4	337 aa		7.21	□□□□□ -1.26
SPIDR-208	ENST00000518711	NEURL1B	A8MQ27	555 aa		7.21	□□□□□ -1.26
SPIDR-208	ENST00000518711	ITGA6	P23229	1130 aa		7.21	□□□□□ -1.26
SPIDR-208	ENST00000518711	KCNJ4	P48050	445 aa		7.21	□□□□□ -1.26
SPIDR-208	ENST00000518711	TNNI2	P48788	182 aa		7.21	□□□□□ -1.26
SPIDR-208	ENST00000518711	CHRND	Q07001	517 aa		7.21	□□□□□ -1.26
SPIDR-208	ENST00000518711	MKRN4P	Q13434	485 aa	Predicted RBP	7.21	□□□□□ -1.26
SPIDR-208	ENST00000518711	SNAPC2	Q13487	334 aa		7.21	□□□□□ -1.26
SPIDR-208	ENST00000518711	CCL15	Q16663	113 aa		7.21	□□□□□ -1.26
SPIDR-208	ENST00000518711	AKNAD1	Q5T1N1	836 aa		7.21	□□□□□ -1.26
SPIDR-208	ENST00000518711	C17orf99	Q6UX52	265 aa		7.21	□□□□□ -1.26
SPIDR-208	ENST00000518711	PI4KAP1	Q8N8J0	262 aa		7.21	□□□□□ -1.26
SPIDR-208	ENST00000518711	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	7.21	□□□□□ -1.26
SPIDR-208	ENST00000518711	SRRD	Q9UH36	339 aa		7.21	□□□□□ -1.26
SPIDR-208	ENST00000518711	CSAD	Q9Y600	493 aa		7.21	□□□□□ -1.26
SPIDR-208	ENST00000518711	ECM29	Q5VYK3	1845 aa		7.2	□□□□□ -1.26
SPIDR-208	ENST00000518711	GFRA3	O60609	400 aa		7.2	□□□□□ -1.26
SPIDR-208	ENST00000518711	CASP7	P55210	303 aa		7.2	□□□□□ -1.26
SPIDR-208	ENST00000518711	PPAT	Q06203	517 aa		7.2	□□□□□ -1.26
SPIDR-208	ENST00000518711	GCKR	Q14397	625 aa		7.2	□□□□□ -1.26
SPIDR-208	ENST00000518711	NEUROD2	Q15784	382 aa		7.2	□□□□□ -1.26
SPIDR-208	ENST00000518711	FAM83A	Q86UY5	434 aa		7.2	□□□□□ -1.26
SPIDR-208	ENST00000518711	FAM43A	Q8N2R8	423 aa		7.2	□□□□□ -1.26
SPIDR-208	ENST00000518711	TDRD7	Q8NHU6	1098 aa	Known RBP	7.2	□□□□□ -1.26
SPIDR-208	ENST00000518711	FBXW7	Q969H0	707 aa		7.2	□□□□□ -1.26
SPIDR-208	ENST00000518711	CCDC85A	Q96PX6	553 aa	Predicted RBP	7.2	□□□□□ -1.26
SPIDR-208	ENST00000518711	LBHD1	Q9BQE6	289 aa	Predicted RBP	7.2	□□□□□ -1.26
SPIDR-208	ENST00000518711	CRISPLD2	Q9H0B8	497 aa		7.2	□□□□□ -1.26
SPIDR-208	ENST00000518711	MYH16	Q9H6N6	1097 aa		7.2	□□□□□ -1.26
SPIDR-208	ENST00000518711	CXXC1	Q9P0U4	656 aa	Predicted RBP	7.2	□□□□□ -1.26
SPIDR-208	ENST00000518711	ZNF70	Q9UC06	446 aa	Predicted RBP	7.2	□□□□□ -1.26
SPIDR-208	ENST00000518711	SUGT1	Q9Y2Z0	365 aa		7.2	□□□□□ -1.26
SPIDR-208	ENST00000518711	CACNA1F	O60840	1977 aa		7.19	□□□□□ -1.26
SPIDR-208	ENST00000518711	ANKRD18B	A2A2Z9	1011 aa		7.19	□□□□□ -1.26
SPIDR-208	ENST00000518711	IFIT5	Q13325	482 aa	Known RBP	7.19	□□□□□ -1.26
SPIDR-208	ENST00000518711	PPIL2	Q13356	520 aa		7.19	□□□□□ -1.26
SPIDR-208	ENST00000518711	VGLL4	Q14135	290 aa		7.19	□□□□□ -1.26
SPIDR-208	ENST00000518711	UBE4A	Q14139	1066 aa		7.19	□□□□□ -1.26
SPIDR-208	ENST00000518711	PDE3A	Q14432	1141 aa		7.19	□□□□□ -1.26
SPIDR-208	ENST00000518711	WDR43	Q15061	677 aa	Known RBP eCLIP	7.19	□□□□□ -1.26
SPIDR-208	ENST00000518711	CCDC85B	Q15834	202 aa	Predicted RBP	7.19	□□□□□ -1.26
SPIDR-208	ENST00000518711	AAK1	Q2M2I8	961 aa		7.19	□□□□□ -1.26
SPIDR-208	ENST00000518711	UBE3B	Q7Z3V4	1068 aa		7.19	□□□□□ -1.26
SPIDR-208	ENST00000518711	ANKRD23	Q86SG2	305 aa		7.19	□□□□□ -1.26
SPIDR-208	ENST00000518711	DZIP1L	Q8IYY4	767 aa	Known RBP	7.19	□□□□□ -1.26
SPIDR-208	ENST00000518711	LINS1	Q8NG48	757 aa		7.19	□□□□□ -1.26
SPIDR-208	ENST00000518711	PXYLP1	Q8TE99	480 aa		7.19	□□□□□ -1.26
SPIDR-208	ENST00000518711	TBC1D22A	Q8WUA7	517 aa		7.19	□□□□□ -1.26
SPIDR-208	ENST00000518711	ZNF428	Q96B54	188 aa		7.19	□□□□□ -1.26
SPIDR-208	ENST00000518711	CNTNAP3B	Q96NU0	1288 aa		7.19	□□□□□ -1.26
SPIDR-208	ENST00000518711	STK31	Q9BXU1	1019 aa		7.19	□□□□□ -1.26
SPIDR-208	ENST00000518711	CNTNAP3	Q9BZ76	1288 aa		7.19	□□□□□ -1.26
SPIDR-208	ENST00000518711	NBPF3	Q9H094	633 aa		7.19	□□□□□ -1.26
SPIDR-208	ENST00000518711	TSPYL2	Q9H2G4	693 aa	Predicted RBP	7.19	□□□□□ -1.26
SPIDR-208	ENST00000518711	ELP3	Q9H9T3	547 aa		7.19	□□□□□ -1.26
SPIDR-208	ENST00000518711	VEZT	Q9HBM0	779 aa		7.19	□□□□□ -1.26
SPIDR-208	ENST00000518711	MYBBP1A	Q9BQG0	1328 aa	Known RBP	7.19	□□□□□ -1.26
SPIDR-208	ENST00000518711	CLRN2	A0PK11	232 aa		7.18	□□□□□ -1.26
SPIDR-208	ENST00000518711	BTBD19	C9JJ37	291 aa		7.18	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms