RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 AATFQ9NY61 560 aaKnown RBP eCLIP12.64□□□□□ -0.39
PABPC1-203ENST00000517921 RPAP1Q9BWH6 1393 aaPredicted RBP12.64□□□□□ -0.39
PABPC1-203ENST00000517921 SIPA1L1O43166 1804 aa12.64□□□□□ -0.39
PABPC1-203ENST00000517921 PATL2C9JE40 543 aaKnown RBP12.63□□□□□ -0.39
PABPC1-203ENST00000517921 PRKAB2O43741 272 aa12.63□□□□□ -0.39
PABPC1-203ENST00000517921 LDHCP07864 332 aa12.63□□□□□ -0.39
PABPC1-203ENST00000517921 ALX1Q15699 326 aa12.63□□□□□ -0.39
PABPC1-203ENST00000517921 FAM163AQ96GL9 167 aaPredicted RBP12.63□□□□□ -0.39
PABPC1-203ENST00000517921 ZNRF3Q9ULT6 936 aa12.63□□□□□ -0.39
PABPC1-203ENST00000517921 TTF2Q9UNY4 1162 aaKnown RBP12.63□□□□□ -0.39
PABPC1-203ENST00000517921 DAGLAQ9Y4D2 1042 aa12.63□□□□□ -0.39
PABPC1-203ENST00000517921 TAF6LQ9Y6J9 622 aa12.63□□□□□ -0.39
PABPC1-203ENST00000517921 SLC4A4Q9Y6R1 1079 aa12.63□□□□□ -0.39
PABPC1-203ENST00000517921 GPR75-ASB3A0A0A6YYF3 556 aa12.62□□□□□ -0.39
PABPC1-203ENST00000517921 GSG1L2A8MUP6 293 aa12.62□□□□□ -0.39
PABPC1-203ENST00000517921 F8W031 263 aaPredicted RBP12.62□□□□□ -0.39
PABPC1-203ENST00000517921 PSMD14O00487 310 aa12.62□□□□□ -0.39
PABPC1-203ENST00000517921 RAD17O75943 681 aa12.62□□□□□ -0.39
PABPC1-203ENST00000517921 FGAP02671 866 aa12.62□□□□□ -0.39
PABPC1-203ENST00000517921 CYP21A2P08686 494 aa12.62□□□□□ -0.39
PABPC1-203ENST00000517921 VIL1P09327 827 aaKnown RBP12.62□□□□□ -0.39
PABPC1-203ENST00000517921 PPP4CP60510 307 aa12.62□□□□□ -0.39
PABPC1-203ENST00000517921 RABEP1Q15276 862 aa12.62□□□□□ -0.39
PABPC1-203ENST00000517921 RNF20Q5VTR2 975 aa12.62□□□□□ -0.39
PABPC1-203ENST00000517921 RSBN1LQ6PCB5 846 aaPredicted RBP12.62□□□□□ -0.39
PABPC1-203ENST00000517921 SLF2Q8IX21 1173 aa12.62□□□□□ -0.39
PABPC1-203ENST00000517921 MYO3BQ8WXR4 1341 aa12.62□□□□□ -0.39
PABPC1-203ENST00000517921 POLR2AP24928 1970 aaKnown RBP12.61□□□□□ -0.39
PABPC1-203ENST00000517921 ZKSCAN1P17029 563 aaPredicted RBP12.61□□□□□ -0.39
PABPC1-203ENST00000517921 LMNB1P20700 586 aa12.61□□□□□ -0.39
PABPC1-203ENST00000517921 BTDP43251 543 aa12.61□□□□□ -0.39
PABPC1-203ENST00000517921 SCNN1DP51172 638 aa12.61□□□□□ -0.39
PABPC1-203ENST00000517921 MAPK8IP2Q13387 824 aaPredicted RBP12.61□□□□□ -0.39
PABPC1-203ENST00000517921 ADCK5Q3MIX3 580 aa12.61□□□□□ -0.39
PABPC1-203ENST00000517921 TSGA10IPQ3SY00 556 aa12.61□□□□□ -0.39
PABPC1-203ENST00000517921 KIAA0825Q8IV33 1275 aa12.61□□□□□ -0.39
PABPC1-203ENST00000517921 SDR42E1Q8WUS8 393 aa12.61□□□□□ -0.39
PABPC1-203ENST00000517921 GMLQ99445 158 aa12.61□□□□□ -0.39
PABPC1-203ENST00000517921 CTNNA3Q9UI47 895 aa12.61□□□□□ -0.39
PABPC1-203ENST00000517921 KIF3CO14782 793 aa12.6□□□□□ -0.39
PABPC1-203ENST00000517921 BAG3O95817 575 aa12.6□□□□□ -0.39
PABPC1-203ENST00000517921 APPP05067 770 aa12.6□□□□□ -0.39
PABPC1-203ENST00000517921 CRKP46108 304 aa12.6□□□□□ -0.39
PABPC1-203ENST00000517921 RHBDL3P58872 404 aa12.6□□□□□ -0.39
PABPC1-203ENST00000517921 HDLBPQ00341 1268 aaKnown RBP12.6□□□□□ -0.39
PABPC1-203ENST00000517921 CXCL9Q07325 125 aa12.6□□□□□ -0.39
PABPC1-203ENST00000517921 IMMTQ16891 758 aaKnown RBP12.6□□□□□ -0.39
PABPC1-203ENST00000517921 HHIPL2Q6UWX4 724 aa12.6□□□□□ -0.39
PABPC1-203ENST00000517921 STOX1Q6ZVD7 989 aa12.6□□□□□ -0.39
PABPC1-203ENST00000517921 CERS3Q8IU89 383 aa12.6□□□□□ -0.39
PABPC1-203ENST00000517921 IFNL3Q8IZI9 196 aa12.6□□□□□ -0.39
PABPC1-203ENST00000517921 SH3RF3Q8TEJ3 882 aaPredicted RBP12.6□□□□□ -0.39
PABPC1-203ENST00000517921 JDP2Q8WYK2 163 aa12.6□□□□□ -0.39
PABPC1-203ENST00000517921 DDRGK1Q96HY6 314 aa12.6□□□□□ -0.39
PABPC1-203ENST00000517921 NOL10Q9BSC4 688 aaKnown RBP12.6□□□□□ -0.39
PABPC1-203ENST00000517921 CRNKL1Q9BZJ0 848 aaKnown RBP12.6□□□□□ -0.39
PABPC1-203ENST00000517921 NAPBQ9H115 298 aa12.6□□□□□ -0.39
PABPC1-203ENST00000517921 FZD9O00144 591 aa12.59□□□□□ -0.39
PABPC1-203ENST00000517921 PLCG2P16885 1265 aa12.59□□□□□ -0.39
PABPC1-203ENST00000517921 TDO2P48775 406 aa12.59□□□□□ -0.39
PABPC1-203ENST00000517921 HAND2P61296 217 aa12.59□□□□□ -0.39
PABPC1-203ENST00000517921 CIAPIN1Q6FI81 312 aa12.59□□□□□ -0.39
PABPC1-203ENST00000517921 GIMAP6Q6P9H5 292 aa12.59□□□□□ -0.39
PABPC1-203ENST00000517921 TEKT1Q969V4 418 aa12.59□□□□□ -0.39
PABPC1-203ENST00000517921 ZDHHC15Q96MV8 337 aa12.59□□□□□ -0.39
PABPC1-203ENST00000517921 JAKMIP1Q96N16 626 aaKnown RBP12.59□□□□□ -0.39
PABPC1-203ENST00000517921 MRIQ9BWK5 157 aa12.59□□□□□ -0.39
PABPC1-203ENST00000517921 UPF3BQ9BZI7 483 aaKnown RBP12.59□□□□□ -0.39
PABPC1-203ENST00000517921 NACAP1Q9BZK3 213 aa12.59□□□□□ -0.39
PABPC1-203ENST00000517921 TM6SF1Q9BZW5 370 aa12.59□□□□□ -0.39
PABPC1-203ENST00000517921 NBPF3Q9H094 633 aa12.59□□□□□ -0.39
PABPC1-203ENST00000517921 NMRK2Q9NPI5 230 aa12.59□□□□□ -0.39
PABPC1-203ENST00000517921 DCP1AQ9NPI6 582 aaPredicted RBP12.59□□□□□ -0.39
PABPC1-203ENST00000517921 ATP8A2Q9NTI2 1148 aa12.59□□□□□ -0.39
PABPC1-203ENST00000517921 SERPINA10Q9UK55 444 aa12.59□□□□□ -0.39
PABPC1-203ENST00000517921 CD2BP2O95400 341 aaKnown RBP12.58□□□□□ -0.4
PABPC1-203ENST00000517921 CASTP20810 708 aaKnown RBP12.58□□□□□ -0.4
PABPC1-203ENST00000517921 COL9A3Q14050 684 aaPredicted RBP12.58□□□□□ -0.4
PABPC1-203ENST00000517921 KRT32Q14532 448 aa12.58□□□□□ -0.4
PABPC1-203ENST00000517921 APOBEC3HQ6NTF7 200 aaKnown RBP12.58□□□□□ -0.4
PABPC1-203ENST00000517921 TBC1D10CQ8IV04 446 aa12.58□□□□□ -0.4
PABPC1-203ENST00000517921 AGBL3Q8NEM8 1001 aa12.58□□□□□ -0.4
PABPC1-203ENST00000517921 SNX21Q969T3 373 aa12.58□□□□□ -0.4
PABPC1-203ENST00000517921 MKRN1Q9UHC7 482 aaKnown RBP12.58□□□□□ -0.4
PABPC1-203ENST00000517921 ZBTB12Q9Y330 459 aaPredicted RBP12.58□□□□□ -0.4
PABPC1-203ENST00000517921 ZNF541Q9H0D2 1346 aa12.58□□□□□ -0.4
PABPC1-203ENST00000517921 GREB1LQ9C091 1923 aaPredicted RBP12.57□□□□□ -0.4
PABPC1-203ENST00000517921 ZNF213O14771 459 aa12.57□□□□□ -0.4
PABPC1-203ENST00000517921 TOMM70O94826 608 aa12.57□□□□□ -0.4
PABPC1-203ENST00000517921 USP5P45974 858 aa12.57□□□□□ -0.4
PABPC1-203ENST00000517921 NEK4P51957 841 aa12.57□□□□□ -0.4
PABPC1-203ENST00000517921 TEX11Q8IYF3 940 aa12.57□□□□□ -0.4
PABPC1-203ENST00000517921 IPO9Q96P70 1041 aaKnown RBP12.57□□□□□ -0.4
PABPC1-203ENST00000517921 TBC1D2Q9BYX2 928 aa12.57□□□□□ -0.4
PABPC1-203ENST00000517921 RRAGCQ9HB90 399 aa12.57□□□□□ -0.4
PABPC1-203ENST00000517921 ZSWIM6Q9HCJ5 1215 aa12.57□□□□□ -0.4
PABPC1-203ENST00000517921 PCDHAC2Q9Y5I4 1007 aa12.57□□□□□ -0.4
PABPC1-203ENST00000517921 ZC3H4Q9UPT8 1303 aaKnown RBP12.57□□□□□ -0.4
PABPC1-203ENST00000517921 MYH6P13533 1939 aa12.56□□□□□ -0.4
PABPC1-203ENST00000517921 MYH4Q9Y623 1939 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms