RNA–Protein interactions for RNA: ENST00000517785.1

LINC00535-202, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 264 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-202ENST00000517785 DPF3Q92784 378 aa7.5□□□□□ -1.21
LINC00535-202ENST00000517785 CELF1Q92879 486 aaKnown RBP7.5□□□□□ -1.21
LINC00535-202ENST00000517785 HLA-CQ95604 372 aa7.5□□□□□ -1.21
LINC00535-202ENST00000517785 ZNF333Q96JL9 665 aa7.5□□□□□ -1.21
LINC00535-202ENST00000517785 USB1Q9BQ65 265 aaKnown RBP7.5□□□□□ -1.21
LINC00535-202ENST00000517785 CFHR5Q9BXR6 569 aa7.5□□□□□ -1.21
LINC00535-202ENST00000517785 EFCC1Q9HA90 598 aa7.5□□□□□ -1.21
LINC00535-202ENST00000517785 MYOZ2Q9NPC6 264 aa7.5□□□□□ -1.21
LINC00535-202ENST00000517785 ZSWIM8A7E2V4 1837 aa7.5□□□□□ -1.21
LINC00535-202ENST00000517785 TTC24A2A3L6 582 aaPredicted RBP7.49□□□□□ -1.21
LINC00535-202ENST00000517785 WTIPA6NIX2 430 aaPredicted RBP7.49□□□□□ -1.21
LINC00535-202ENST00000517785 WNT7AO00755 349 aa7.49□□□□□ -1.21
LINC00535-202ENST00000517785 AXIN1O15169 862 aa7.49□□□□□ -1.21
LINC00535-202ENST00000517785 DXOO77932 396 aaKnown RBP7.49□□□□□ -1.21
LINC00535-202ENST00000517785 VIL1P09327 827 aaKnown RBP7.49□□□□□ -1.21
LINC00535-202ENST00000517785 HSPA5P11021 654 aaKnown RBP7.49□□□□□ -1.21
LINC00535-202ENST00000517785 SMCPP49901 116 aaPredicted RBP7.49□□□□□ -1.21
LINC00535-202ENST00000517785 ZNF280AP59817 542 aaPredicted RBP7.49□□□□□ -1.21
LINC00535-202ENST00000517785 CRHR2Q13324 411 aa7.49□□□□□ -1.21
LINC00535-202ENST00000517785 NBPF9Q3BBW0 867 aa7.49□□□□□ -1.21
LINC00535-202ENST00000517785 RSBN1LQ6PCB5 846 aaPredicted RBP7.49□□□□□ -1.21
LINC00535-202ENST00000517785 ERO1AQ96HE7 468 aa7.49□□□□□ -1.21
LINC00535-202ENST00000517785 PTCH2Q9Y6C5 1203 aa7.49□□□□□ -1.21
LINC00535-202ENST00000517785 PSME4Q14997 1843 aa7.49□□□□□ -1.21
LINC00535-202ENST00000517785 SASH1O94885 1247 aa7.48□□□□□ -1.21
LINC00535-202ENST00000517785 ALDH1A1P00352 501 aa7.48□□□□□ -1.21
LINC00535-202ENST00000517785 NF2P35240 595 aa7.48□□□□□ -1.21
LINC00535-202ENST00000517785 USP46P62068 366 aa7.48□□□□□ -1.21
LINC00535-202ENST00000517785 PROSER3Q2NL68 480 aa7.48□□□□□ -1.21
LINC00535-202ENST00000517785 SLC9C1Q4G0N8 1177 aa7.48□□□□□ -1.21
LINC00535-202ENST00000517785 LCE2AQ5TA79 106 aaPredicted RBP7.48□□□□□ -1.21
LINC00535-202ENST00000517785 ARMC9Q7Z3E5 817 aa7.48□□□□□ -1.21
LINC00535-202ENST00000517785 TBC1D16Q8TBP0 767 aa7.48□□□□□ -1.21
LINC00535-202ENST00000517785 SH3TC2Q8TF17 1288 aa7.48□□□□□ -1.21
LINC00535-202ENST00000517785 CLMNQ96JQ2 1002 aa7.48□□□□□ -1.21
LINC00535-202ENST00000517785 EYA3Q99504 573 aa7.48□□□□□ -1.21
LINC00535-202ENST00000517785 MXD3Q9BW11 206 aa7.48□□□□□ -1.21
LINC00535-202ENST00000517785 RSPH6AQ9H0K4 717 aa7.48□□□□□ -1.21
LINC00535-202ENST00000517785 GMPR2Q9P2T1 348 aaKnown RBP7.48□□□□□ -1.21
LINC00535-202ENST00000517785 TRMT112Q9UI30 125 aaKnown RBP7.48□□□□□ -1.21
LINC00535-202ENST00000517785 ANGEL1Q9UNK9 670 aaKnown RBP7.48□□□□□ -1.21
LINC00535-202ENST00000517785 PITPNM2Q9BZ72 1349 aa7.48□□□□□ -1.21
LINC00535-202ENST00000517785 HOXA2O43364 376 aa7.47□□□□□ -1.21
LINC00535-202ENST00000517785 UFL1O94874 794 aa7.47□□□□□ -1.21
LINC00535-202ENST00000517785 USP17L8P0C7I0 530 aa7.47□□□□□ -1.21
LINC00535-202ENST00000517785 SMPD1P17405 629 aa7.47□□□□□ -1.21
LINC00535-202ENST00000517785 AIMP1Q12904 312 aaKnown RBP7.47□□□□□ -1.21
LINC00535-202ENST00000517785 TAF7Q15545 349 aaPredicted RBP7.47□□□□□ -1.21
LINC00535-202ENST00000517785 RTL5Q5HYW3 569 aaPredicted RBP7.47□□□□□ -1.21
LINC00535-202ENST00000517785 TREML4Q6UXN2 200 aa7.47□□□□□ -1.21
LINC00535-202ENST00000517785 NLRP10Q86W26 655 aa7.47□□□□□ -1.21
LINC00535-202ENST00000517785 SNIP1Q8TAD8 396 aaKnown RBP7.47□□□□□ -1.21
LINC00535-202ENST00000517785 COL25A1Q9BXS0 654 aaPredicted RBP7.47□□□□□ -1.21
LINC00535-202ENST00000517785 SH3TC1Q8TE82 1336 aa7.47□□□□□ -1.21
LINC00535-202ENST00000517785 DLG5Q8TDM6 1919 aa7.46□□□□□ -1.21
LINC00535-202ENST00000517785 MANSC4A6NHS7 340 aaPredicted RBP7.46□□□□□ -1.22
LINC00535-202ENST00000517785 TULP1O00294 542 aaPredicted RBP7.46□□□□□ -1.22
LINC00535-202ENST00000517785 EIF2S2P20042 333 aaKnown RBP7.46□□□□□ -1.22
LINC00535-202ENST00000517785 EIF4A1P60842 406 aaKnown RBP7.46□□□□□ -1.22
LINC00535-202ENST00000517785 SP3Q02447 781 aa7.46□□□□□ -1.22
LINC00535-202ENST00000517785 Q7L0L9 218 aa7.46□□□□□ -1.22
LINC00535-202ENST00000517785 TMC4Q7Z404 712 aa7.46□□□□□ -1.22
LINC00535-202ENST00000517785 AGBL3Q8NEM8 1001 aa7.46□□□□□ -1.22
LINC00535-202ENST00000517785 SHISA4Q96DD7 197 aa7.46□□□□□ -1.22
LINC00535-202ENST00000517785 WNK4Q96J92 1243 aa7.46□□□□□ -1.22
LINC00535-202ENST00000517785 MRGPRX2Q96LB1 330 aa7.46□□□□□ -1.22
LINC00535-202ENST00000517785 ZC3H12CQ9C0D7 883 aaKnown RBP7.46□□□□□ -1.22
LINC00535-202ENST00000517785 J3QL48 77 aa7.45□□□□□ -1.22
LINC00535-202ENST00000517785 GJA5P36382 358 aa7.45□□□□□ -1.22
LINC00535-202ENST00000517785 EIF4G2P78344 907 aaKnown RBP eCLIP7.45□□□□□ -1.22
LINC00535-202ENST00000517785 GUCA2AQ02747 115 aa7.45□□□□□ -1.22
LINC00535-202ENST00000517785 LDLRAD1Q5T700 205 aa7.45□□□□□ -1.22
LINC00535-202ENST00000517785 NBPF11Q86T75 865 aa7.45□□□□□ -1.22
LINC00535-202ENST00000517785 SLC10A4Q96EP9 437 aa7.45□□□□□ -1.22
LINC00535-202ENST00000517785 GMLQ99445 158 aa7.45□□□□□ -1.22
LINC00535-202ENST00000517785 PRO3102Q9H379 93 aa7.45□□□□□ -1.22
LINC00535-202ENST00000517785 ANKIB1Q9P2G1 1089 aa7.45□□□□□ -1.22
LINC00535-202ENST00000517785 TTC28Q96AY4 2481 aa7.44□□□□□ -1.22
LINC00535-202ENST00000517785 SPTBN5Q9NRC6 3674 aaKnown RBP7.44□□□□□ -1.22
LINC00535-202ENST00000517785 WNT10BO00744 389 aa7.44□□□□□ -1.22
LINC00535-202ENST00000517785 U2AF1L5P0DN76 240 aaPredicted RBP7.44□□□□□ -1.22
LINC00535-202ENST00000517785 U2AF1Q01081 240 aaKnown RBP eCLIP7.44□□□□□ -1.22
LINC00535-202ENST00000517785 MTFR1Q15390 333 aa7.44□□□□□ -1.22
LINC00535-202ENST00000517785 LRP10Q7Z4F1 713 aa7.44□□□□□ -1.22
LINC00535-202ENST00000517785 XAGE3Q8WTP9 111 aa7.44□□□□□ -1.22
LINC00535-202ENST00000517785 FAM89AQ96GI7 184 aa7.44□□□□□ -1.22
LINC00535-202ENST00000517785 PTPN18Q99952 460 aa7.44□□□□□ -1.22
LINC00535-202ENST00000517785 ARHGAP39Q9C0H5 1083 aa7.44□□□□□ -1.22
LINC00535-202ENST00000517785 GPCPD1Q9NPB8 672 aa7.44□□□□□ -1.22
LINC00535-202ENST00000517785 SEC31BQ9NQW1 1179 aa7.44□□□□□ -1.22
LINC00535-202ENST00000517785 FAM217BQ9NTX9 383 aaPredicted RBP7.44□□□□□ -1.22
LINC00535-202ENST00000517785 GGA1Q9UJY5 639 aa7.44□□□□□ -1.22
LINC00535-202ENST00000517785 LAMB1P07942 1786 aa7.43□□□□□ -1.22
LINC00535-202ENST00000517785 ZNF646O15015 1829 aaPredicted RBP7.43□□□□□ -1.22
LINC00535-202ENST00000517785 SSC5DA1L4H1 1573 aa7.43□□□□□ -1.22
LINC00535-202ENST00000517785 OTOFQ9HC10 1997 aa7.43□□□□□ -1.22
LINC00535-202ENST00000517785 USP17L3A6NCW0 530 aa7.43□□□□□ -1.22
LINC00535-202ENST00000517785 USP17L4A6NCW7 530 aa7.43□□□□□ -1.22
LINC00535-202ENST00000517785 SKOR1P84550 965 aa7.43□□□□□ -1.22
LINC00535-202ENST00000517785 COPS6Q7L5N1 327 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms