RNA–Protein interactions for RNA: ENST00000517484.5

EFCAB13-203, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFCAB13, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-203ENST00000517484 PATL2C9JE40 543 aaKnown RBP11.47□□□□□ -0.57
EFCAB13-203ENST00000517484 UBE2Q2LH0YL09 131 aa11.47□□□□□ -0.57
EFCAB13-203ENST00000517484 SRGNP10124 158 aa11.47□□□□□ -0.57
EFCAB13-203ENST00000517484 SH3RF3Q8TEJ3 882 aaPredicted RBP11.47□□□□□ -0.57
EFCAB13-203ENST00000517484 AIFM3Q96NN9 605 aa11.47□□□□□ -0.57
EFCAB13-203ENST00000517484 CRNKL1Q9BZJ0 848 aaKnown RBP11.47□□□□□ -0.57
EFCAB13-203ENST00000517484 VEZTQ9HBM0 779 aa11.47□□□□□ -0.57
EFCAB13-203ENST00000517484 CNPY2Q9Y2B0 182 aa11.47□□□□□ -0.57
EFCAB13-203ENST00000517484 CLRN2A0PK11 232 aa11.47□□□□□ -0.57
EFCAB13-203ENST00000517484 STX6O43752 255 aa11.47□□□□□ -0.57
EFCAB13-203ENST00000517484 ARID4AP29374 1257 aaPredicted RBP11.47□□□□□ -0.57
EFCAB13-203ENST00000517484 ALDH1B1P30837 517 aa11.47□□□□□ -0.57
EFCAB13-203ENST00000517484 DNM1Q05193 864 aaKnown RBP11.47□□□□□ -0.57
EFCAB13-203ENST00000517484 RNF214Q8ND24 703 aa11.47□□□□□ -0.57
EFCAB13-203ENST00000517484 EPB41L4AQ9HCS5 686 aaPredicted RBP11.47□□□□□ -0.57
EFCAB13-203ENST00000517484 ZSWIM5Q9P217 1185 aa11.47□□□□□ -0.57
EFCAB13-203ENST00000517484 CRYBG1Q9Y4K1 1723 aa11.47□□□□□ -0.57
EFCAB13-203ENST00000517484 GSG1L2A8MUP6 293 aa11.47□□□□□ -0.57
EFCAB13-203ENST00000517484 DPEP1P16444 411 aa11.47□□□□□ -0.57
EFCAB13-203ENST00000517484 BTDP43251 543 aa11.47□□□□□ -0.57
EFCAB13-203ENST00000517484 TOB2Q14106 344 aaPredicted RBP11.47□□□□□ -0.57
EFCAB13-203ENST00000517484 UBE3CQ15386 1083 aa11.47□□□□□ -0.57
EFCAB13-203ENST00000517484 AMOTL1Q8IY63 956 aa11.47□□□□□ -0.57
EFCAB13-203ENST00000517484 SLC12A7Q9Y666 1083 aa11.47□□□□□ -0.57
EFCAB13-203ENST00000517484 CYB5R4Q7L1T6 521 aa11.46□□□□□ -0.57
EFCAB13-203ENST00000517484 FLAD1Q8NFF5 587 aa11.46□□□□□ -0.57
EFCAB13-203ENST00000517484 DSCC1Q9BVC3 393 aa11.46□□□□□ -0.57
EFCAB13-203ENST00000517484 NPR1P16066 1061 aa11.46□□□□□ -0.58
EFCAB13-203ENST00000517484 MASTLQ96GX5 879 aa11.46□□□□□ -0.58
EFCAB13-203ENST00000517484 SLC26A6Q9BXS9 759 aa11.46□□□□□ -0.58
EFCAB13-203ENST00000517484 NEDD4P46934 1319 aa11.46□□□□□ -0.58
EFCAB13-203ENST00000517484 GOLGA8AA7E2F4 631 aa11.45□□□□□ -0.58
EFCAB13-203ENST00000517484 POLD1P28340 1107 aa11.45□□□□□ -0.58
EFCAB13-203ENST00000517484 SCRN1Q12765 414 aa11.45□□□□□ -0.58
EFCAB13-203ENST00000517484 ANKRD1Q15327 319 aa11.45□□□□□ -0.58
EFCAB13-203ENST00000517484 CLEC10AQ8IUN9 316 aa11.45□□□□□ -0.58
EFCAB13-203ENST00000517484 AKT1S1Q96B36 256 aa11.45□□□□□ -0.58
EFCAB13-203ENST00000517484 CAMKK2Q96RR4 588 aa11.45□□□□□ -0.58
EFCAB13-203ENST00000517484 TRIM34Q9BYJ4 488 aa11.45□□□□□ -0.58
EFCAB13-203ENST00000517484 CPVLQ9H3G5 476 aa11.45□□□□□ -0.58
EFCAB13-203ENST00000517484 ORC3Q9UBD5 711 aaPredicted RBP11.45□□□□□ -0.58
EFCAB13-203ENST00000517484 ITGB4P16144 1822 aa11.45□□□□□ -0.58
EFCAB13-203ENST00000517484 BAG3O95817 575 aa11.45□□□□□ -0.58
EFCAB13-203ENST00000517484 ATP2B4P23634 1241 aa11.45□□□□□ -0.58
EFCAB13-203ENST00000517484 AKAP17AQ02040 695 aaKnown RBP11.45□□□□□ -0.58
EFCAB13-203ENST00000517484 PPARAQ07869 468 aa11.45□□□□□ -0.58
EFCAB13-203ENST00000517484 SART3Q15020 963 aaKnown RBP11.45□□□□□ -0.58
EFCAB13-203ENST00000517484 CDC37L1Q7L3B6 337 aa11.45□□□□□ -0.58
EFCAB13-203ENST00000517484 NSUN4Q96CB9 384 aaKnown RBP11.45□□□□□ -0.58
EFCAB13-203ENST00000517484 LEMD3Q9Y2U8 911 aa11.45□□□□□ -0.58
EFCAB13-203ENST00000517484 PTPDC1A2A3K4 754 aa11.45□□□□□ -0.58
EFCAB13-203ENST00000517484 METAP2P50579 478 aaKnown RBP eCLIP11.45□□□□□ -0.58
EFCAB13-203ENST00000517484 SF3A1Q15459 793 aaKnown RBP11.45□□□□□ -0.58
EFCAB13-203ENST00000517484 FBXO33Q7Z6M2 555 aa11.45□□□□□ -0.58
EFCAB13-203ENST00000517484 HOMER1Q86YM7 354 aa11.45□□□□□ -0.58
EFCAB13-203ENST00000517484 ZNF444Q8N0Y2 327 aaPredicted RBP11.45□□□□□ -0.58
EFCAB13-203ENST00000517484 WDR66Q8TBY9 1149 aa11.45□□□□□ -0.58
EFCAB13-203ENST00000517484 TULP1O00294 542 aaPredicted RBP11.44□□□□□ -0.58
EFCAB13-203ENST00000517484 PRKG1Q13976 671 aa11.44□□□□□ -0.58
EFCAB13-203ENST00000517484 GSE1Q14687 1217 aa11.44□□□□□ -0.58
EFCAB13-203ENST00000517484 UIMC1Q96RL1 719 aa11.44□□□□□ -0.58
EFCAB13-203ENST00000517484 FTOQ9C0B1 505 aaKnown RBP eCLIP11.44□□□□□ -0.58
EFCAB13-203ENST00000517484 BRPF3Q9ULD4 1205 aa11.44□□□□□ -0.58
EFCAB13-203ENST00000517484 WTAPQ15007 396 aa11.44□□□□□ -0.58
EFCAB13-203ENST00000517484 CAMK4Q16566 473 aa11.44□□□□□ -0.58
EFCAB13-203ENST00000517484 SPTY2D1Q68D10 685 aaPredicted RBP11.44□□□□□ -0.58
EFCAB13-203ENST00000517484 CRACR2BQ8N4Y2 399 aaPredicted RBP11.44□□□□□ -0.58
EFCAB13-203ENST00000517484 ZSCAN31Q96LW9 406 aaPredicted RBP11.44□□□□□ -0.58
EFCAB13-203ENST00000517484 TTC14Q96N46 770 aa11.44□□□□□ -0.58
EFCAB13-203ENST00000517484 CWC22Q9HCG8 908 aaKnown RBP11.44□□□□□ -0.58
EFCAB13-203ENST00000517484 USP40Q9NVE5 1235 aa11.44□□□□□ -0.58
EFCAB13-203ENST00000517484 GOLGA8HP0CJ92 632 aa11.44□□□□□ -0.58
EFCAB13-203ENST00000517484 IKQ13123 557 aaPredicted RBP11.44□□□□□ -0.58
EFCAB13-203ENST00000517484 MED23Q9ULK4 1368 aa11.43□□□□□ -0.58
EFCAB13-203ENST00000517484 USP17L3A6NCW0 530 aa11.43□□□□□ -0.58
EFCAB13-203ENST00000517484 USP17L4A6NCW7 530 aa11.43□□□□□ -0.58
EFCAB13-203ENST00000517484 RAB3GAP1Q15042 981 aa11.43□□□□□ -0.58
EFCAB13-203ENST00000517484 ZRSR1Q15695 479 aaKnown RBP11.43□□□□□ -0.58
EFCAB13-203ENST00000517484 AKNAD1Q5T1N1 836 aa11.43□□□□□ -0.58
EFCAB13-203ENST00000517484 USP17L1Q7RTZ2 530 aa11.43□□□□□ -0.58
EFCAB13-203ENST00000517484 ZDHHC9Q9Y397 364 aa11.43□□□□□ -0.58
EFCAB13-203ENST00000517484 BAZ2BQ9UIF8 2168 aaKnown RBP11.43□□□□□ -0.58
EFCAB13-203ENST00000517484 TCP10L2B9ZVM9 353 aa11.43□□□□□ -0.58
EFCAB13-203ENST00000517484 ZBTB43O43298 467 aa11.43□□□□□ -0.58
EFCAB13-203ENST00000517484 GADD45BO75293 160 aaPredicted RBP11.43□□□□□ -0.58
EFCAB13-203ENST00000517484 TFAP4Q01664 338 aa11.43□□□□□ -0.58
EFCAB13-203ENST00000517484 CPLX2Q6PUV4 134 aaKnown RBP11.43□□□□□ -0.58
EFCAB13-203ENST00000517484 BICD2Q8TD16 824 aa11.43□□□□□ -0.58
EFCAB13-203ENST00000517484 PANK2Q9BZ23 570 aa11.43□□□□□ -0.58
EFCAB13-203ENST00000517484 PLEKHG2Q9H7P9 1386 aa11.43□□□□□ -0.58
EFCAB13-203ENST00000517484 AFDNP55196 1824 aaKnown RBP11.43□□□□□ -0.58
EFCAB13-203ENST00000517484 CACNA1FO60840 1977 aa11.43□□□□□ -0.58
EFCAB13-203ENST00000517484 FOXP2O15409 715 aa11.43□□□□□ -0.58
EFCAB13-203ENST00000517484 TTLL6Q8N841 843 aa11.43□□□□□ -0.58
EFCAB13-203ENST00000517484 ATP6V0A2Q9Y487 856 aa11.43□□□□□ -0.58
EFCAB13-203ENST00000517484 WDR33Q9C0J8 1336 aaKnown RBP11.43□□□□□ -0.58
EFCAB13-203ENST00000517484 TSPY3P0CV98 308 aa11.42□□□□□ -0.58
EFCAB13-203ENST00000517484 TSPY8P0CW00 308 aa11.42□□□□□ -0.58
EFCAB13-203ENST00000517484 PDIA3P30101 505 aaKnown RBP11.42□□□□□ -0.58
EFCAB13-203ENST00000517484 ZYXQ15942 572 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms