RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 PPP2R3AQ06190 1150 aa9.44□□□□□ -0.9
SCARNA1-201ENST00000517138 DYMQ7RTS9 669 aa9.44□□□□□ -0.9
SCARNA1-201ENST00000517138 CLEC10AQ8IUN9 316 aa9.44□□□□□ -0.9
SCARNA1-201ENST00000517138 HOMEZQ8IX15 550 aa9.44□□□□□ -0.9
SCARNA1-201ENST00000517138 KCNB2Q92953 911 aa9.44□□□□□ -0.9
SCARNA1-201ENST00000517138 FAM105AQ9NUU6 356 aa9.44□□□□□ -0.9
SCARNA1-201ENST00000517138 AP4E1Q9UPM8 1137 aa9.44□□□□□ -0.9
SCARNA1-201ENST00000517138 EIF4EBP3O60516 100 aaPredicted RBP9.43□□□□□ -0.9
SCARNA1-201ENST00000517138 IGLV1-40P01703 118 aa9.43□□□□□ -0.9
SCARNA1-201ENST00000517138 NME2P22392 152 aa9.43□□□□□ -0.9
SCARNA1-201ENST00000517138 ARNTP27540 789 aa9.43□□□□□ -0.9
SCARNA1-201ENST00000517138 RXRBP28702 533 aa9.43□□□□□ -0.9
SCARNA1-201ENST00000517138 MAP1SQ66K74 1059 aaPredicted RBP9.43□□□□□ -0.9
SCARNA1-201ENST00000517138 HIF3AQ9Y2N7 669 aa9.43□□□□□ -0.9
SCARNA1-201ENST00000517138 AK5Q9Y6K8 562 aa9.43□□□□□ -0.9
SCARNA1-201ENST00000517138 TMPRSS2O15393 492 aa9.42□□□□□ -0.9
SCARNA1-201ENST00000517138 EIF4BP23588 611 aaKnown RBP9.42□□□□□ -0.9
SCARNA1-201ENST00000517138 USP11P51784 963 aa9.42□□□□□ -0.9
SCARNA1-201ENST00000517138 ZNF252P-AS1Q0IIN9 211 aa9.42□□□□□ -0.9
SCARNA1-201ENST00000517138 NFIAQ12857 509 aa9.42□□□□□ -0.9
SCARNA1-201ENST00000517138 CBX8Q9HC52 389 aa9.42□□□□□ -0.9
SCARNA1-201ENST00000517138 PCDHGC5Q9Y5F6 944 aa9.42□□□□□ -0.9
SCARNA1-201ENST00000517138 RAB6AP20340 208 aa9.41□□□□□ -0.9
SCARNA1-201ENST00000517138 RNF43Q68DV7 783 aa9.41□□□□□ -0.9
SCARNA1-201ENST00000517138 PPM1HQ9ULR3 514 aa9.41□□□□□ -0.9
SCARNA1-201ENST00000517138 NFICP08651 508 aa9.4□□□□□ -0.9
SCARNA1-201ENST00000517138 DAB2P98082 770 aa9.4□□□□□ -0.9
SCARNA1-201ENST00000517138 NFKBIBQ15653 356 aa9.4□□□□□ -0.9
SCARNA1-201ENST00000517138 KIF4BQ2VIQ3 1234 aa9.4□□□□□ -0.9
SCARNA1-201ENST00000517138 MEI1Q5TIA1 1274 aa9.4□□□□□ -0.9
SCARNA1-201ENST00000517138 ZDHHC13Q8IUH4 622 aa9.4□□□□□ -0.9
SCARNA1-201ENST00000517138 Q8N3U1 123 aa9.4□□□□□ -0.9
SCARNA1-201ENST00000517138 GPBAR1Q8TDU6 330 aa9.4□□□□□ -0.9
SCARNA1-201ENST00000517138 MFSD14AQ96MC6 490 aa9.4□□□□□ -0.9
SCARNA1-201ENST00000517138 GSX1Q9H4S2 264 aaPredicted RBP9.4□□□□□ -0.9
SCARNA1-201ENST00000517138 TTF2Q9UNY4 1162 aaKnown RBP9.4□□□□□ -0.9
SCARNA1-201ENST00000517138 FAM95CA0A1B0GW59 222 aa9.39□□□□□ -0.91
SCARNA1-201ENST00000517138 DYNC1LI2O43237 492 aaPredicted RBP9.39□□□□□ -0.91
SCARNA1-201ENST00000517138 TGFB1P01137 390 aa9.39□□□□□ -0.91
SCARNA1-201ENST00000517138 CTSHP09668 335 aa9.39□□□□□ -0.91
SCARNA1-201ENST00000517138 ADMP35318 185 aa9.39□□□□□ -0.91
SCARNA1-201ENST00000517138 ASPAP45381 313 aa9.39□□□□□ -0.91
SCARNA1-201ENST00000517138 HP1BP3Q5SSJ5 553 aaPredicted RBP9.39□□□□□ -0.91
SCARNA1-201ENST00000517138 ANKRD24Q8TF21 1146 aa9.39□□□□□ -0.91
SCARNA1-201ENST00000517138 EZH1Q92800 747 aaPredicted RBP9.39□□□□□ -0.91
SCARNA1-201ENST00000517138 FRMD6Q96NE9 622 aa9.39□□□□□ -0.91
SCARNA1-201ENST00000517138 CEP44Q9C0F1 390 aa9.39□□□□□ -0.91
SCARNA1-201ENST00000517138 SEMA6CQ9H3T2 930 aa9.39□□□□□ -0.91
SCARNA1-201ENST00000517138 ACSS3Q9H6R3 686 aa9.39□□□□□ -0.91
SCARNA1-201ENST00000517138 LGR6Q9HBX8 967 aa9.39□□□□□ -0.91
SCARNA1-201ENST00000517138 KRT82Q9NSB4 513 aa9.39□□□□□ -0.91
SCARNA1-201ENST00000517138 CRIM1Q9NZV1 1036 aa9.39□□□□□ -0.91
SCARNA1-201ENST00000517138 SHKBP1Q8TBC3 707 aa9.38□□□□□ -0.91
SCARNA1-201ENST00000517138 FANCD2OSQ96PS1 177 aa9.38□□□□□ -0.91
SCARNA1-201ENST00000517138 DBNDD2Q9BQY9 259 aa9.38□□□□□ -0.91
SCARNA1-201ENST00000517138 DISC1Q9NRI5 854 aa9.38□□□□□ -0.91
SCARNA1-201ENST00000517138 CACNA2D2Q9NY47 1150 aa9.38□□□□□ -0.91
SCARNA1-201ENST00000517138 PTPN11Q06124 597 aaPredicted RBP9.37□□□□□ -0.91
SCARNA1-201ENST00000517138 PSMD2Q13200 908 aa9.37□□□□□ -0.91
SCARNA1-201ENST00000517138 PCNX4Q63HM2 1172 aa9.37□□□□□ -0.91
SCARNA1-201ENST00000517138 FBXL6Q8N531 539 aa9.37□□□□□ -0.91
SCARNA1-201ENST00000517138 RNF112Q9ULX5 631 aa9.37□□□□□ -0.91
SCARNA1-201ENST00000517138 ZBTB7CA1YPR0 619 aa9.36□□□□□ -0.91
SCARNA1-201ENST00000517138 PRR19A6NJB7 356 aa9.36□□□□□ -0.91
SCARNA1-201ENST00000517138 MED26O95402 600 aa9.36□□□□□ -0.91
SCARNA1-201ENST00000517138 F13BP05160 661 aa9.36□□□□□ -0.91
SCARNA1-201ENST00000517138 ID3Q02535 119 aa9.36□□□□□ -0.91
SCARNA1-201ENST00000517138 TMC4Q7Z404 712 aa9.36□□□□□ -0.91
SCARNA1-201ENST00000517138 CSADQ9Y600 493 aa9.36□□□□□ -0.91
SCARNA1-201ENST00000517138 SYNGAP1Q96PV0 1343 aa9.35□□□□□ -0.91
SCARNA1-201ENST00000517138 SCO2A0A1W2PP80 73 aa9.35□□□□□ -0.91
SCARNA1-201ENST00000517138 WDR64B1ANS9 1081 aa9.35□□□□□ -0.91
SCARNA1-201ENST00000517138 SLFN14P0C7P3 912 aa9.35□□□□□ -0.91
SCARNA1-201ENST00000517138 XPCQ01831 940 aaPredicted RBP9.35□□□□□ -0.91
SCARNA1-201ENST00000517138 TTLL4Q14679 1199 aa9.35□□□□□ -0.91
SCARNA1-201ENST00000517138 GATA6Q92908 595 aa9.35□□□□□ -0.91
SCARNA1-201ENST00000517138 EMILIN2Q9BXX0 1053 aa9.35□□□□□ -0.91
SCARNA1-201ENST00000517138 PRKAG2Q9UGJ0 569 aa9.35□□□□□ -0.91
SCARNA1-201ENST00000517138 DAGLAQ9Y4D2 1042 aa9.35□□□□□ -0.91
SCARNA1-201ENST00000517138 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.34□□□□□ -0.91
SCARNA1-201ENST00000517138 GSC2O15499 205 aa9.34□□□□□ -0.91
SCARNA1-201ENST00000517138 NEFMP07197 916 aa9.34□□□□□ -0.91
SCARNA1-201ENST00000517138 HCLS1P14317 486 aaPredicted RBP9.34□□□□□ -0.91
SCARNA1-201ENST00000517138 MAP3K11Q16584 847 aa9.34□□□□□ -0.91
SCARNA1-201ENST00000517138 ZC3H12AQ5D1E8 599 aaKnown RBP9.34□□□□□ -0.91
SCARNA1-201ENST00000517138 TMCO4Q5TGY1 634 aa9.34□□□□□ -0.91
SCARNA1-201ENST00000517138 LLGL2Q6P1M3 1020 aa9.34□□□□□ -0.91
SCARNA1-201ENST00000517138 PAOXQ6QHF9 649 aa9.34□□□□□ -0.91
SCARNA1-201ENST00000517138 SEZ6L2Q6UXD5 910 aa9.34□□□□□ -0.91
SCARNA1-201ENST00000517138 ACSBG1Q96GR2 724 aa9.34□□□□□ -0.91
SCARNA1-201ENST00000517138 SSTR4P31391 388 aa9.33□□□□□ -0.92
SCARNA1-201ENST00000517138 TRIM26Q12899 539 aaPredicted RBP9.33□□□□□ -0.92
SCARNA1-201ENST00000517138 CCDC85BQ15834 202 aaPredicted RBP9.33□□□□□ -0.92
SCARNA1-201ENST00000517138 SV2BQ7L1I2 683 aa9.33□□□□□ -0.92
SCARNA1-201ENST00000517138 C1GALT1Q9NS00 363 aa9.33□□□□□ -0.92
SCARNA1-201ENST00000517138 FAM170BA6NMN3 283 aa9.32□□□□□ -0.92
SCARNA1-201ENST00000517138 DCDC2CA8MYV0 355 aa9.32□□□□□ -0.92
SCARNA1-201ENST00000517138 HYAL3O43820 417 aaPredicted RBP9.32□□□□□ -0.92
SCARNA1-201ENST00000517138 ERCC3P19447 782 aa9.32□□□□□ -0.92
SCARNA1-201ENST00000517138 CDK8P49336 464 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms