RNA–Protein interactions for RNA: ENST00000516826.1

RNU2-56P-201, Transcript of RNA, U2 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU2-56P, Length 190 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-56P-201ENST00000516826 C14orf37Q86TY3 774 aa3.52□□□□□ -1.85
RNU2-56P-201ENST00000516826 GLMNQ92990 594 aa3.52□□□□□ -1.85
RNU2-56P-201ENST00000516826 ZKSCAN3Q9BRR0 538 aa3.52□□□□□ -1.85
RNU2-56P-201ENST00000516826 TNKS2Q9H2K2 1166 aa3.52□□□□□ -1.85
RNU2-56P-201ENST00000516826 CD320Q9NPF0 282 aa3.52□□□□□ -1.85
RNU2-56P-201ENST00000516826 RAD18Q9NS91 495 aa3.52□□□□□ -1.85
RNU2-56P-201ENST00000516826 ZBTB39O15060 712 aa3.51□□□□□ -1.85
RNU2-56P-201ENST00000516826 CEACAM5P06731 702 aa3.51□□□□□ -1.85
RNU2-56P-201ENST00000516826 TMEM253P0C7T8 217 aa3.51□□□□□ -1.85
RNU2-56P-201ENST00000516826 FAM87AP0C7U9 286 aa3.51□□□□□ -1.85
RNU2-56P-201ENST00000516826 EDN3P14138 238 aa3.51□□□□□ -1.85
RNU2-56P-201ENST00000516826 MAOBP27338 520 aa3.51□□□□□ -1.85
RNU2-56P-201ENST00000516826 CD96P40200 585 aa3.51□□□□□ -1.85
RNU2-56P-201ENST00000516826 POU4F3Q15319 338 aa3.51□□□□□ -1.85
RNU2-56P-201ENST00000516826 KCNA10Q16322 511 aa3.51□□□□□ -1.85
RNU2-56P-201ENST00000516826 FAM181AQ8N9Y4 354 aa3.51□□□□□ -1.85
RNU2-56P-201ENST00000516826 ASB11Q8WXH4 323 aa3.51□□□□□ -1.85
RNU2-56P-201ENST00000516826 NUDT16Q96DE0 195 aaKnown RBP3.51□□□□□ -1.85
RNU2-56P-201ENST00000516826 CHRDQ9H2X0 955 aa3.51□□□□□ -1.85
RNU2-56P-201ENST00000516826 PLAGL2Q9UPG8 496 aa3.51□□□□□ -1.85
RNU2-56P-201ENST00000516826 DAGLAQ9Y4D2 1042 aa3.51□□□□□ -1.85
RNU2-56P-201ENST00000516826 ACIN1Q9UKV3 1341 aaKnown RBP3.5□□□□□ -1.85
RNU2-56P-201ENST00000516826 NPIPB6E9PJ23 425 aa3.5□□□□□ -1.85
RNU2-56P-201ENST00000516826 TMEM67Q5HYA8 995 aa3.5□□□□□ -1.85
RNU2-56P-201ENST00000516826 AKAP4Q5JQC9 854 aa3.5□□□□□ -1.85
RNU2-56P-201ENST00000516826 MPZL3Q6UWV2 235 aa3.5□□□□□ -1.85
RNU2-56P-201ENST00000516826 PRIMPOLQ96LW4 560 aa3.5□□□□□ -1.85
RNU2-56P-201ENST00000516826 FOXD2O60548 495 aaPredicted RBP3.49□□□□□ -1.85
RNU2-56P-201ENST00000516826 CTSBP07858 339 aa3.49□□□□□ -1.85
RNU2-56P-201ENST00000516826 PCSK2P16519 638 aa3.49□□□□□ -1.85
RNU2-56P-201ENST00000516826 GLDCP23378 1020 aa3.49□□□□□ -1.85
RNU2-56P-201ENST00000516826 FYB2Q5VWT5 728 aa3.49□□□□□ -1.85
RNU2-56P-201ENST00000516826 DDX54Q8TDD1 881 aaKnown RBP3.49□□□□□ -1.85
RNU2-56P-201ENST00000516826 KIRREL1Q96J84 757 aa3.49□□□□□ -1.85
RNU2-56P-201ENST00000516826 C1orf115Q9H7X2 142 aa3.49□□□□□ -1.85
RNU2-56P-201ENST00000516826 PARD6AQ9NPB6 346 aa3.49□□□□□ -1.85
RNU2-56P-201ENST00000516826 AP4E1Q9UPM8 1137 aa3.49□□□□□ -1.85
RNU2-56P-201ENST00000516826 AOC2O75106 756 aa3.48□□□□□ -1.85
RNU2-56P-201ENST00000516826 LMOD1P29536 600 aaPredicted RBP3.48□□□□□ -1.85
RNU2-56P-201ENST00000516826 ZP2Q05996 745 aa3.48□□□□□ -1.85
RNU2-56P-201ENST00000516826 ZNF423Q2M1K9 1284 aa3.48□□□□□ -1.85
RNU2-56P-201ENST00000516826 CYFIP1Q7L576 1253 aa3.48□□□□□ -1.85
RNU2-56P-201ENST00000516826 ASAP3Q8TDY4 903 aa3.48□□□□□ -1.85
RNU2-56P-201ENST00000516826 CLEC4MQ9H2X3 399 aaPredicted RBP3.48□□□□□ -1.85
RNU2-56P-201ENST00000516826 U3KQE9 123 aa3.48□□□□□ -1.85
RNU2-56P-201ENST00000516826 SRFP11831 508 aa3.47□□□□□ -1.85
RNU2-56P-201ENST00000516826 GDNFP39905 211 aa3.47□□□□□ -1.85
RNU2-56P-201ENST00000516826 PCDH1Q08174 1060 aa3.47□□□□□ -1.85
RNU2-56P-201ENST00000516826 CDK5R2Q13319 367 aa3.47□□□□□ -1.85
RNU2-56P-201ENST00000516826 NAA30Q147X3 362 aaPredicted RBP3.47□□□□□ -1.85
RNU2-56P-201ENST00000516826 CFAP70Q5T0N1 1121 aa3.47□□□□□ -1.85
RNU2-56P-201ENST00000516826 ATG14Q6ZNE5 492 aa3.47□□□□□ -1.85
RNU2-56P-201ENST00000516826 ARHGAP27Q6ZUM4 889 aa3.47□□□□□ -1.85
RNU2-56P-201ENST00000516826 CALR3Q96L12 384 aaKnown RBP3.47□□□□□ -1.85
RNU2-56P-201ENST00000516826 CORO1BQ9BR76 489 aa3.47□□□□□ -1.85
RNU2-56P-201ENST00000516826 DUSP23Q9BVJ7 150 aa3.47□□□□□ -1.85
RNU2-56P-201ENST00000516826 GGNBP2Q9H3C7 697 aa3.47□□□□□ -1.85
RNU2-56P-201ENST00000516826 ATXN3LQ9H3M9 355 aa3.47□□□□□ -1.85
RNU2-56P-201ENST00000516826 LGR6Q9HBX8 967 aa3.47□□□□□ -1.85
RNU2-56P-201ENST00000516826 PRDM7Q9NQW5 492 aa3.47□□□□□ -1.85
RNU2-56P-201ENST00000516826 CXXC1Q9P0U4 656 aaPredicted RBP3.47□□□□□ -1.85
RNU2-56P-201ENST00000516826 PPP1R9AQ9ULJ8 1098 aa3.47□□□□□ -1.85
RNU2-56P-201ENST00000516826 SMG5Q9UPR3 1016 aaKnown RBP3.47□□□□□ -1.85
RNU2-56P-201ENST00000516826 TCAF2A6NFQ2 919 aa3.46□□□□□ -1.86
RNU2-56P-201ENST00000516826 IGF2BP3O00425 579 aaKnown RBP eCLIP3.46□□□□□ -1.86
RNU2-56P-201ENST00000516826 PRMT3O60678 531 aa3.46□□□□□ -1.86
RNU2-56P-201ENST00000516826 SYN1P17600 705 aa3.46□□□□□ -1.86
RNU2-56P-201ENST00000516826 FAM69CQ0P6D2 419 aa3.46□□□□□ -1.86
RNU2-56P-201ENST00000516826 IKZF1Q13422 519 aa3.46□□□□□ -1.86
RNU2-56P-201ENST00000516826 ELOAQ14241 798 aaKnown RBP3.46□□□□□ -1.86
RNU2-56P-201ENST00000516826 PEAR1Q5VY43 1037 aaPredicted RBP3.46□□□□□ -1.86
RNU2-56P-201ENST00000516826 CAPN12Q6ZSI9 719 aa3.46□□□□□ -1.86
RNU2-56P-201ENST00000516826 TTC16Q8NEE8 873 aa3.46□□□□□ -1.86
RNU2-56P-201ENST00000516826 BORCS6Q96GS4 357 aa3.46□□□□□ -1.86
RNU2-56P-201ENST00000516826 TRIM56Q9BRZ2 755 aaKnown RBP3.46□□□□□ -1.86
RNU2-56P-201ENST00000516826 WDR18Q9BV38 432 aa3.46□□□□□ -1.86
RNU2-56P-201ENST00000516826 NSUN3Q9H649 340 aaKnown RBP3.46□□□□□ -1.86
RNU2-56P-201ENST00000516826 ZNF777Q9ULD5 760 aaPredicted RBP3.46□□□□□ -1.86
RNU2-56P-201ENST00000516826 NOVA2Q9UNW9 492 aaKnown RBP3.46□□□□□ -1.86
RNU2-56P-201ENST00000516826 A0A096LPE4 126 aa3.45□□□□□ -1.86
RNU2-56P-201ENST00000516826 A0A1W2PPZ6 126 aa3.45□□□□□ -1.86
RNU2-56P-201ENST00000516826 EREGO14944 169 aa3.45□□□□□ -1.86
RNU2-56P-201ENST00000516826 TMPRSS2O15393 492 aa3.45□□□□□ -1.86
RNU2-56P-201ENST00000516826 NUAK1O60285 661 aa3.45□□□□□ -1.86
RNU2-56P-201ENST00000516826 SLFN14P0C7P3 912 aa3.45□□□□□ -1.86
RNU2-56P-201ENST00000516826 MZF1P28698 734 aaPredicted RBP3.45□□□□□ -1.86
RNU2-56P-201ENST00000516826 LINC00310P59036 64 aa3.45□□□□□ -1.86
RNU2-56P-201ENST00000516826 SRPK2P78362 688 aaKnown RBP3.45□□□□□ -1.86
RNU2-56P-201ENST00000516826 FAM214BQ7L5A3 538 aa3.45□□□□□ -1.86
RNU2-56P-201ENST00000516826 SMYD4Q8IYR2 804 aaPredicted RBP3.45□□□□□ -1.86
RNU2-56P-201ENST00000516826 CXorf38Q8TB03 319 aa3.45□□□□□ -1.86
RNU2-56P-201ENST00000516826 CCDC120Q96HB5 630 aa3.45□□□□□ -1.86
RNU2-56P-201ENST00000516826 SLC26A8Q96RN1 970 aa3.45□□□□□ -1.86
RNU2-56P-201ENST00000516826 PIDD1Q9HB75 910 aa3.45□□□□□ -1.86
RNU2-56P-201ENST00000516826 SERPINA10Q9UK55 444 aa3.45□□□□□ -1.86
RNU2-56P-201ENST00000516826 PCOLCE2Q9UKZ9 415 aa3.45□□□□□ -1.86
RNU2-56P-201ENST00000516826 ARID3CA6NKF2 412 aa3.44□□□□□ -1.86
RNU2-56P-201ENST00000516826 ETV2O00321 342 aaPredicted RBP3.44□□□□□ -1.86
RNU2-56P-201ENST00000516826 PSPNO60542 156 aa3.44□□□□□ -1.86
RNU2-56P-201ENST00000516826 PHACTR2O75167 634 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms