RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 PLP2Q04941 152 aa2.82□□□□□ -1.96
SNORA40.13-201ENST00000516379 CRB2Q5IJ48 1285 aa2.82□□□□□ -1.96
SNORA40.13-201ENST00000516379 TTC39BQ5VTQ0 682 aaPredicted RBP2.82□□□□□ -1.96
SNORA40.13-201ENST00000516379 ZDHHC14Q8IZN3 488 aa2.82□□□□□ -1.96
SNORA40.13-201ENST00000516379 ZNF594Q96JF6 807 aaPredicted RBP2.82□□□□□ -1.96
SNORA40.13-201ENST00000516379 MCOLN1Q9GZU1 580 aa2.82□□□□□ -1.96
SNORA40.13-201ENST00000516379 ALG2Q9H553 416 aa2.82□□□□□ -1.96
SNORA40.13-201ENST00000516379 ABI2Q9NYB9 513 aaPredicted RBP2.82□□□□□ -1.96
SNORA40.13-201ENST00000516379 SALL4Q9UJQ4 1053 aa2.82□□□□□ -1.96
SNORA40.13-201ENST00000516379 CNOT6Q9ULM6 557 aaKnown RBP2.82□□□□□ -1.96
SNORA40.13-201ENST00000516379 SLPIP03973 132 aa2.81□□□□□ -1.96
SNORA40.13-201ENST00000516379 ESRRAP11474 423 aaPredicted RBP2.81□□□□□ -1.96
SNORA40.13-201ENST00000516379 ZNF385BQ569K4 471 aa2.81□□□□□ -1.96
SNORA40.13-201ENST00000516379 AKAP4Q5JQC9 854 aa2.81□□□□□ -1.96
SNORA40.13-201ENST00000516379 TMEM151BQ8IW70 566 aa2.81□□□□□ -1.96
SNORA40.13-201ENST00000516379 SPACA3Q8IXA5 215 aa2.81□□□□□ -1.96
SNORA40.13-201ENST00000516379 ETFBKMTQ8IXQ9 262 aa2.81□□□□□ -1.96
SNORA40.13-201ENST00000516379 BSNDQ8WZ55 320 aa2.81□□□□□ -1.96
SNORA40.13-201ENST00000516379 DUSP23Q9BVJ7 150 aa2.81□□□□□ -1.96
SNORA40.13-201ENST00000516379 MRIQ9BWK5 157 aa2.81□□□□□ -1.96
SNORA40.13-201ENST00000516379 ADAM7Q9H2U9 754 aa2.81□□□□□ -1.96
SNORA40.13-201ENST00000516379 PRM3Q9NNZ6 103 aa2.81□□□□□ -1.96
SNORA40.13-201ENST00000516379 AP4E1Q9UPM8 1137 aa2.81□□□□□ -1.96
SNORA40.13-201ENST00000516379 KCTD3Q9Y597 815 aa2.81□□□□□ -1.96
SNORA40.13-201ENST00000516379 MYOCOSA0A1B0GUC4 107 aa2.8□□□□□ -1.96
SNORA40.13-201ENST00000516379 USP17L3A6NCW0 530 aa2.8□□□□□ -1.96
SNORA40.13-201ENST00000516379 USP17L4A6NCW7 530 aa2.8□□□□□ -1.96
SNORA40.13-201ENST00000516379 SEC13P55735 322 aa2.8□□□□□ -1.96
SNORA40.13-201ENST00000516379 GSTM4Q03013 218 aa2.8□□□□□ -1.96
SNORA40.13-201ENST00000516379 SWI5Q1ZZU3 235 aa2.8□□□□□ -1.96
SNORA40.13-201ENST00000516379 USP17L2Q6R6M4 530 aa2.8□□□□□ -1.96
SNORA40.13-201ENST00000516379 ARHGAP27Q6ZUM4 889 aa2.8□□□□□ -1.96
SNORA40.13-201ENST00000516379 USP17L1Q7RTZ2 530 aa2.8□□□□□ -1.96
SNORA40.13-201ENST00000516379 TMEM102Q8N9M5 508 aaPredicted RBP2.8□□□□□ -1.96
SNORA40.13-201ENST00000516379 HEXIM2Q96MH2 286 aaKnown RBP2.8□□□□□ -1.96
SNORA40.13-201ENST00000516379 BDH2Q9BUT1 245 aa2.8□□□□□ -1.96
SNORA40.13-201ENST00000516379 GDPD2Q9HCC8 539 aa2.8□□□□□ -1.96
SNORA40.13-201ENST00000516379 GCM1Q9NP62 436 aa2.8□□□□□ -1.96
SNORA40.13-201ENST00000516379 KANSL3Q9P2N6 904 aa2.8□□□□□ -1.96
SNORA40.13-201ENST00000516379 MKRN1Q9UHC7 482 aaKnown RBP2.8□□□□□ -1.96
SNORA40.13-201ENST00000516379 ZC3H12DA2A288 527 aaKnown RBP2.79□□□□□ -1.96
SNORA40.13-201ENST00000516379 ABL2P42684 1182 aa2.79□□□□□ -1.96
SNORA40.13-201ENST00000516379 SSPNQ14714 243 aa2.79□□□□□ -1.96
SNORA40.13-201ENST00000516379 NKPD1Q17RQ9 610 aa2.79□□□□□ -1.96
SNORA40.13-201ENST00000516379 FAM26DQ5JW98 314 aa2.79□□□□□ -1.96
SNORA40.13-201ENST00000516379 FAM214BQ7L5A3 538 aa2.79□□□□□ -1.96
SNORA40.13-201ENST00000516379 ABHD4Q8TB40 342 aa2.79□□□□□ -1.96
SNORA40.13-201ENST00000516379 NXPE3Q969Y0 559 aa2.79□□□□□ -1.96
SNORA40.13-201ENST00000516379 HINFPQ9BQA5 517 aa2.79□□□□□ -1.96
SNORA40.13-201ENST00000516379 CARS2Q9HA77 564 aaKnown RBP2.79□□□□□ -1.96
SNORA40.13-201ENST00000516379 RBM19Q9Y4C8 960 aaKnown RBP2.79□□□□□ -1.96
SNORA40.13-201ENST00000516379 A6NJR5 290 aa2.78□□□□□ -1.96
SNORA40.13-201ENST00000516379 SEMA7AO75326 666 aa2.78□□□□□ -1.96
SNORA40.13-201ENST00000516379 MAOBP27338 520 aa2.78□□□□□ -1.96
SNORA40.13-201ENST00000516379 COX20Q5RI15 118 aa2.78□□□□□ -1.96
SNORA40.13-201ENST00000516379 VSIG10Q8N0Z9 540 aa2.78□□□□□ -1.96
SNORA40.13-201ENST00000516379 SYT8Q8NBV8 401 aa2.78□□□□□ -1.96
SNORA40.13-201ENST00000516379 CNTN3Q9P232 1028 aa2.78□□□□□ -1.96
SNORA40.13-201ENST00000516379 PPP1R9AQ9ULJ8 1098 aa2.78□□□□□ -1.96
SNORA40.13-201ENST00000516379 SLC22A31A6NKX4 558 aa2.77□□□□□ -1.97
SNORA40.13-201ENST00000516379 FOXO3O43524 673 aa2.77□□□□□ -1.97
SNORA40.13-201ENST00000516379 WEE1P30291 646 aa2.77□□□□□ -1.97
SNORA40.13-201ENST00000516379 KRTAP5-11Q6L8G4 156 aa2.77□□□□□ -1.97
SNORA40.13-201ENST00000516379 FRMD5Q7Z6J6 570 aa2.77□□□□□ -1.97
SNORA40.13-201ENST00000516379 PANK1Q8TE04 598 aa2.77□□□□□ -1.97
SNORA40.13-201ENST00000516379 PIK3R5Q8WYR1 880 aa2.77□□□□□ -1.97
SNORA40.13-201ENST00000516379 DACT3Q96B18 629 aaPredicted RBP2.77□□□□□ -1.97
SNORA40.13-201ENST00000516379 RAD18Q9NS91 495 aa2.77□□□□□ -1.97
SNORA40.13-201ENST00000516379 CNOT11Q9UKZ1 510 aaKnown RBP2.77□□□□□ -1.97
SNORA40.13-201ENST00000516379 SYNGAP1Q96PV0 1343 aa2.76□□□□□ -1.97
SNORA40.13-201ENST00000516379 RFXAPO00287 272 aa2.76□□□□□ -1.97
SNORA40.13-201ENST00000516379 PRICKLE3O43900 615 aaPredicted RBP2.76□□□□□ -1.97
SNORA40.13-201ENST00000516379 EIF4EBP3O60516 100 aaPredicted RBP2.76□□□□□ -1.97
SNORA40.13-201ENST00000516379 PEX10O60683 326 aa2.76□□□□□ -1.97
SNORA40.13-201ENST00000516379 ECEL1O95672 775 aa2.76□□□□□ -1.97
SNORA40.13-201ENST00000516379 RGS19P49795 217 aa2.76□□□□□ -1.97
SNORA40.13-201ENST00000516379 RTP5Q14D33 572 aa2.76□□□□□ -1.97
SNORA40.13-201ENST00000516379 TMEM63CQ9P1W3 806 aa2.76□□□□□ -1.97
SNORA40.13-201ENST00000516379 PALD1Q9ULE6 856 aa2.76□□□□□ -1.97
SNORA40.13-201ENST00000516379 FNDC3AQ9Y2H6 1198 aaKnown RBP2.76□□□□□ -1.97
SNORA40.13-201ENST00000516379 C1QTNF3-AMACRE9PGA6 284 aa2.75□□□□□ -1.97
SNORA40.13-201ENST00000516379 IGF2BP3O00425 579 aaKnown RBP eCLIP2.75□□□□□ -1.97
SNORA40.13-201ENST00000516379 AOC2O75106 756 aa2.75□□□□□ -1.97
SNORA40.13-201ENST00000516379 CYP11A1P05108 521 aa2.75□□□□□ -1.97
SNORA40.13-201ENST00000516379 ACVRL1P37023 503 aa2.75□□□□□ -1.97
SNORA40.13-201ENST00000516379 MAGEA10P43363 369 aaPredicted RBP2.75□□□□□ -1.97
SNORA40.13-201ENST00000516379 CLCN7P51798 805 aa2.75□□□□□ -1.97
SNORA40.13-201ENST00000516379 KRTAP10-9P60411 292 aa2.75□□□□□ -1.97
SNORA40.13-201ENST00000516379 ERVFC1P60507 584 aa2.75□□□□□ -1.97
SNORA40.13-201ENST00000516379 POU4F3Q15319 338 aa2.75□□□□□ -1.97
SNORA40.13-201ENST00000516379 HP1BP3Q5SSJ5 553 aaPredicted RBP2.75□□□□□ -1.97
SNORA40.13-201ENST00000516379 NAF1Q96HR8 494 aaKnown RBP2.75□□□□□ -1.97
SNORA40.13-201ENST00000516379 WDR18Q9BV38 432 aa2.75□□□□□ -1.97
SNORA40.13-201ENST00000516379 SGPP1Q9BX95 441 aa2.75□□□□□ -1.97
SNORA40.13-201ENST00000516379 ELP3Q9H9T3 547 aa2.75□□□□□ -1.97
SNORA40.13-201ENST00000516379 TNFRSF18Q9Y5U5 241 aa2.75□□□□□ -1.97
SNORA40.13-201ENST00000516379 TEX51A0A1B0GUA7 166 aa2.74□□□□□ -1.97
SNORA40.13-201ENST00000516379 CYR61O00622 381 aa2.74□□□□□ -1.97
SNORA40.13-201ENST00000516379 TMPRSS2O15393 492 aa2.74□□□□□ -1.97
SNORA40.13-201ENST00000516379 PI3P19957 117 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms