RNA–Protein interactions for RNA: ENST00000515996.1

SCARNA21.1-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.1-201ENST00000515996 SH2B1Q9NRF2 756 aaPredicted RBP1□□□□□ -2.25
SCARNA21.1-201ENST00000515996 SCHIP1Q9P0W5 487 aaPredicted RBP1□□□□□ -2.25
SCARNA21.1-201ENST00000515996 DAGLAQ9Y4D2 1042 aa1□□□□□ -2.25
SCARNA21.1-201ENST00000515996 DUSP10Q9Y6W6 482 aa1□□□□□ -2.25
SCARNA21.1-201ENST00000515996 SERTM1A2A2V5 107 aa0.99□□□□□ -2.25
SCARNA21.1-201ENST00000515996 NPIPB8E9PQR5 432 aa0.99□□□□□ -2.25
SCARNA21.1-201ENST00000515996 HOXB6P17509 224 aaKnown RBP0.99□□□□□ -2.25
SCARNA21.1-201ENST00000515996 ERVFC1P60507 584 aa0.99□□□□□ -2.25
SCARNA21.1-201ENST00000515996 ATP11AP98196 1134 aa0.99□□□□□ -2.25
SCARNA21.1-201ENST00000515996 CDK5R2Q13319 367 aa0.99□□□□□ -2.25
SCARNA21.1-201ENST00000515996 TTLL12Q14166 644 aaPredicted RBP0.99□□□□□ -2.25
SCARNA21.1-201ENST00000515996 TBCELQ5QJ74 424 aa0.99□□□□□ -2.25
SCARNA21.1-201ENST00000515996 NT5DC1Q5TFE4 455 aa0.99□□□□□ -2.25
SCARNA21.1-201ENST00000515996 CEP135Q66GS9 1140 aa0.99□□□□□ -2.25
SCARNA21.1-201ENST00000515996 CNKSR3Q6P9H4 555 aa0.99□□□□□ -2.25
SCARNA21.1-201ENST00000515996 MYLIPQ8WY64 445 aa0.99□□□□□ -2.25
SCARNA21.1-201ENST00000515996 WNT8BQ93098 351 aa0.99□□□□□ -2.25
SCARNA21.1-201ENST00000515996 USP26Q9BXU7 913 aa0.99□□□□□ -2.25
SCARNA21.1-201ENST00000515996 ZNF341Q9BYN7 854 aa0.99□□□□□ -2.25
SCARNA21.1-201ENST00000515996 PHACTR1Q9C0D0 580 aa0.99□□□□□ -2.25
SCARNA21.1-201ENST00000515996 HMX1Q9NP08 348 aaPredicted RBP0.99□□□□□ -2.25
SCARNA21.1-201ENST00000515996 FAM105AQ9NUU6 356 aa0.99□□□□□ -2.25
SCARNA21.1-201ENST00000515996 ST6GALNAC2Q9UJ37 374 aa0.99□□□□□ -2.25
SCARNA21.1-201ENST00000515996 ZFR2Q9UPR6 939 aaKnown RBP0.99□□□□□ -2.25
SCARNA21.1-201ENST00000515996 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP0.98□□□□□ -2.25
SCARNA21.1-201ENST00000515996 H3BRJ5 948 aa0.98□□□□□ -2.25
SCARNA21.1-201ENST00000515996 PSAPP07602 524 aa0.98□□□□□ -2.25
SCARNA21.1-201ENST00000515996 MCCD1P59942 119 aaPredicted RBP0.98□□□□□ -2.25
SCARNA21.1-201ENST00000515996 MAPK7Q13164 816 aa0.98□□□□□ -2.25
SCARNA21.1-201ENST00000515996 KRTAP27-1Q3LI81 207 aa0.98□□□□□ -2.25
SCARNA21.1-201ENST00000515996 MYSM1Q5VVJ2 828 aa0.98□□□□□ -2.25
SCARNA21.1-201ENST00000515996 SLC9A9Q8IVB4 645 aa0.98□□□□□ -2.25
SCARNA21.1-201ENST00000515996 SPACA3Q8IXA5 215 aa0.98□□□□□ -2.25
SCARNA21.1-201ENST00000515996 AMER2Q8N7J2 671 aa0.98□□□□□ -2.25
SCARNA21.1-201ENST00000515996 SLC7A3Q8WY07 619 aa0.98□□□□□ -2.25
SCARNA21.1-201ENST00000515996 DDX1Q92499 740 aaKnown RBP0.98□□□□□ -2.25
SCARNA21.1-201ENST00000515996 NECAB3Q96P71 396 aaPredicted RBP0.98□□□□□ -2.25
SCARNA21.1-201ENST00000515996 TRIM8Q9BZR9 551 aa0.98□□□□□ -2.25
SCARNA21.1-201ENST00000515996 SLC6A17Q9H1V8 727 aa0.98□□□□□ -2.25
SCARNA21.1-201ENST00000515996 ZNF552Q9H707 407 aaPredicted RBP0.98□□□□□ -2.25
SCARNA21.1-201ENST00000515996 OSGEPQ9NPF4 335 aa0.98□□□□□ -2.25
SCARNA21.1-201ENST00000515996 DOLKQ9UPQ8 538 aa0.98□□□□□ -2.25
SCARNA21.1-201ENST00000515996 IRS4O14654 1257 aaPredicted RBP0.97□□□□□ -2.25
SCARNA21.1-201ENST00000515996 SMNDC1O75940 238 aaKnown RBP eCLIP0.97□□□□□ -2.25
SCARNA21.1-201ENST00000515996 EPB42P16452 691 aa0.97□□□□□ -2.25
SCARNA21.1-201ENST00000515996 LTKP29376 864 aa0.97□□□□□ -2.25
SCARNA21.1-201ENST00000515996 TRHRP34981 398 aaPredicted RBP0.97□□□□□ -2.25
SCARNA21.1-201ENST00000515996 ABHD18Q0P651 414 aa0.97□□□□□ -2.25
SCARNA21.1-201ENST00000515996 TSGA10IPQ3SY00 556 aa0.97□□□□□ -2.25
SCARNA21.1-201ENST00000515996 IGFL4Q6B9Z1 124 aa0.97□□□□□ -2.25
SCARNA21.1-201ENST00000515996 MICALCLQ6ZW33 695 aa0.97□□□□□ -2.25
SCARNA21.1-201ENST00000515996 TMPRSS7Q7RTY8 843 aa0.97□□□□□ -2.25
SCARNA21.1-201ENST00000515996 FAM129CQ86XR2 697 aa0.97□□□□□ -2.25
SCARNA21.1-201ENST00000515996 ZNF592Q92610 1267 aa0.97□□□□□ -2.25
SCARNA21.1-201ENST00000515996 CCDC120Q96HB5 630 aa0.97□□□□□ -2.25
SCARNA21.1-201ENST00000515996 Q96M66 194 aa0.97□□□□□ -2.25
SCARNA21.1-201ENST00000515996 MBD1Q9UIS9 605 aaPredicted RBP0.97□□□□□ -2.25
SCARNA21.1-201ENST00000515996 HCN4Q9Y3Q4 1203 aa0.97□□□□□ -2.25
SCARNA21.1-201ENST00000515996 FFAR3O14843 346 aa0.96□□□□□ -2.26
SCARNA21.1-201ENST00000515996 LEFTY1O75610 366 aa0.96□□□□□ -2.26
SCARNA21.1-201ENST00000515996 SOX18P35713 384 aa0.96□□□□□ -2.26
SCARNA21.1-201ENST00000515996 OXLD1Q5BKU9 147 aa0.96□□□□□ -2.26
SCARNA21.1-201ENST00000515996 LCE3AQ5TA76 89 aa0.96□□□□□ -2.26
SCARNA21.1-201ENST00000515996 IER5Q5VY09 327 aa0.96□□□□□ -2.26
SCARNA21.1-201ENST00000515996 HGSNATQ68CP4 663 aa0.96□□□□□ -2.26
SCARNA21.1-201ENST00000515996 DYMQ7RTS9 669 aa0.96□□□□□ -2.26
SCARNA21.1-201ENST00000515996 TTC6Q86TZ1 520 aa0.96□□□□□ -2.26
SCARNA21.1-201ENST00000515996 TMEFF1Q8IYR6 380 aa0.96□□□□□ -2.26
SCARNA21.1-201ENST00000515996 C9orf106Q8NAJ2 232 aa0.96□□□□□ -2.26
SCARNA21.1-201ENST00000515996 PWWP2AQ96N64 755 aa0.96□□□□□ -2.26
SCARNA21.1-201ENST00000515996 ALPK1Q96QP1 1244 aa0.96□□□□□ -2.26
SCARNA21.1-201ENST00000515996 PDGFDQ9GZP0 370 aaPredicted RBP0.96□□□□□ -2.26
SCARNA21.1-201ENST00000515996 FAM177BA6PVY3 158 aa0.95□□□□□ -2.26
SCARNA21.1-201ENST00000515996 N4BP3O15049 544 aa0.95□□□□□ -2.26
SCARNA21.1-201ENST00000515996 MMP20O60882 483 aa0.95□□□□□ -2.26
SCARNA21.1-201ENST00000515996 ZNF202O95125 648 aa0.95□□□□□ -2.26
SCARNA21.1-201ENST00000515996 HPXP02790 462 aa0.95□□□□□ -2.26
SCARNA21.1-201ENST00000515996 PTPRAP18433 802 aa0.95□□□□□ -2.26
SCARNA21.1-201ENST00000515996 HIRAP54198 1017 aaPredicted RBP0.95□□□□□ -2.26
SCARNA21.1-201ENST00000515996 EXOSC6Q5RKV6 272 aaKnown RBP0.95□□□□□ -2.26
SCARNA21.1-201ENST00000515996 PALM2Q8IXS6 379 aa0.95□□□□□ -2.26
SCARNA21.1-201ENST00000515996 INTS4Q96HW7 963 aaKnown RBP0.95□□□□□ -2.26
SCARNA21.1-201ENST00000515996 CDK5RAP1Q96SZ6 601 aaKnown RBP0.95□□□□□ -2.26
SCARNA21.1-201ENST00000515996 AGAP2Q99490 1192 aa0.95□□□□□ -2.26
SCARNA21.1-201ENST00000515996 SLAMF8Q9P0V8 285 aa0.95□□□□□ -2.26
SCARNA21.1-201ENST00000515996 CNTNAP2Q9UHC6 1331 aa0.94□□□□□ -2.26
SCARNA21.1-201ENST00000515996 TGFBR3LH3BV60 316 aa0.94□□□□□ -2.26
SCARNA21.1-201ENST00000515996 AOC2O75106 756 aa0.94□□□□□ -2.26
SCARNA21.1-201ENST00000515996 CDK4P11802 303 aa0.94□□□□□ -2.26
SCARNA21.1-201ENST00000515996 INPP5BP32019 993 aa0.94□□□□□ -2.26
SCARNA21.1-201ENST00000515996 PDE6BP35913 854 aa0.94□□□□□ -2.26
SCARNA21.1-201ENST00000515996 ASPAP45381 313 aa0.94□□□□□ -2.26
SCARNA21.1-201ENST00000515996 HK2P52789 917 aa0.94□□□□□ -2.26
SCARNA21.1-201ENST00000515996 EPHA4P54764 986 aa0.94□□□□□ -2.26
SCARNA21.1-201ENST00000515996 CABP4P57796 275 aa0.94□□□□□ -2.26
SCARNA21.1-201ENST00000515996 MVKQ03426 396 aa0.94□□□□□ -2.26
SCARNA21.1-201ENST00000515996 C19orf57Q0VDD7 668 aa0.94□□□□□ -2.26
SCARNA21.1-201ENST00000515996 HIF1AQ16665 826 aa0.94□□□□□ -2.26
SCARNA21.1-201ENST00000515996 NKPD1Q17RQ9 610 aa0.94□□□□□ -2.26
SCARNA21.1-201ENST00000515996 TREML1Q86YW5 311 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms