RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 CAPNS2Q96L46 248 aa18.29■□□□□ 0.52
PDCD6-211ENST00000515587 BEGAINQ9BUH8 593 aa18.29■□□□□ 0.52
PDCD6-211ENST00000515587 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.29■□□□□ 0.52
PDCD6-211ENST00000515587 AK9Q5TCS8 1911 aa18.28■□□□□ 0.52
PDCD6-211ENST00000515587 TMED8Q6PL24 325 aaPredicted RBP18.28■□□□□ 0.52
PDCD6-211ENST00000515587 PAXIP1Q6ZW49 1069 aaPredicted RBP18.28■□□□□ 0.52
PDCD6-211ENST00000515587 OSBPL3Q9H4L5 887 aa18.28■□□□□ 0.52
PDCD6-211ENST00000515587 ANTXR1Q9H6X2 564 aa18.28■□□□□ 0.52
PDCD6-211ENST00000515587 SPDYE2BA6NHP3 402 aa18.27■□□□□ 0.52
PDCD6-211ENST00000515587 SPDYE6P0CI01 402 aa18.27■□□□□ 0.52
PDCD6-211ENST00000515587 PDE4AP27815 886 aa18.27■□□□□ 0.52
PDCD6-211ENST00000515587 FMR1Q06787 632 aaKnown RBP eCLIP18.27■□□□□ 0.52
PDCD6-211ENST00000515587 DIXDC1Q155Q3 683 aa18.27■□□□□ 0.52
PDCD6-211ENST00000515587 LRRFIP1Q32MZ4 808 aaKnown RBP18.27■□□□□ 0.52
PDCD6-211ENST00000515587 NAA16Q6N069 864 aaPredicted RBP18.27■□□□□ 0.52
PDCD6-211ENST00000515587 ZSCAN25Q6NSZ9 544 aa18.27■□□□□ 0.52
PDCD6-211ENST00000515587 CYP4F22Q6NT55 531 aa18.27■□□□□ 0.52
PDCD6-211ENST00000515587 ZC3H15Q8WU90 426 aaKnown RBP18.27■□□□□ 0.52
PDCD6-211ENST00000515587 NSUN4Q96CB9 384 aaKnown RBP18.27■□□□□ 0.52
PDCD6-211ENST00000515587 ZDHHC15Q96MV8 337 aa18.27■□□□□ 0.52
PDCD6-211ENST00000515587 NOL10Q9BSC4 688 aaKnown RBP18.27■□□□□ 0.52
PDCD6-211ENST00000515587 MAP4K4O95819 1239 aaPredicted RBP18.26■□□□□ 0.51
PDCD6-211ENST00000515587 EGFRP00533 1210 aa18.26■□□□□ 0.51
PDCD6-211ENST00000515587 HIRAP54198 1017 aaPredicted RBP18.26■□□□□ 0.51
PDCD6-211ENST00000515587 EDC3Q96F86 508 aaKnown RBP18.26■□□□□ 0.51
PDCD6-211ENST00000515587 POLR2AP24928 1970 aaKnown RBP18.26■□□□□ 0.51
PDCD6-211ENST00000515587 MROH7-TTC4A0A0A0MT08 1334 aa18.25■□□□□ 0.51
PDCD6-211ENST00000515587 WNT10BO00744 389 aa18.25■□□□□ 0.51
PDCD6-211ENST00000515587 NBPF9Q3BBW0 867 aa18.25■□□□□ 0.51
PDCD6-211ENST00000515587 MAGEB6Q8N7X4 407 aa18.25■□□□□ 0.51
PDCD6-211ENST00000515587 DCPSQ96C86 337 aaKnown RBP18.25■□□□□ 0.51
PDCD6-211ENST00000515587 FAM163AQ96GL9 167 aaPredicted RBP18.25■□□□□ 0.51
PDCD6-211ENST00000515587 TRIM6-TRIM34B2RNG4 842 aa18.24■□□□□ 0.51
PDCD6-211ENST00000515587 CYP7A1P22680 504 aa18.24■□□□□ 0.51
PDCD6-211ENST00000515587 SLC9C2Q5TAH2 1124 aa18.24■□□□□ 0.51
PDCD6-211ENST00000515587 KBTBD3Q8NAB2 608 aa18.24■□□□□ 0.51
PDCD6-211ENST00000515587 EVI5LQ96CN4 794 aa18.24■□□□□ 0.51
PDCD6-211ENST00000515587 ZBED3Q96IU2 234 aaPredicted RBP18.24■□□□□ 0.51
PDCD6-211ENST00000515587 PRMT6Q96LA8 375 aaPredicted RBP18.24■□□□□ 0.51
PDCD6-211ENST00000515587 TMOD2Q9NZR1 351 aa18.24■□□□□ 0.51
PDCD6-211ENST00000515587 DAGLAQ9Y4D2 1042 aa18.24■□□□□ 0.51
PDCD6-211ENST00000515587 GAKO14976 1311 aa18.23■□□□□ 0.51
PDCD6-211ENST00000515587 AOC2O75106 756 aa18.23■□□□□ 0.51
PDCD6-211ENST00000515587 BAG3O95817 575 aa18.23■□□□□ 0.51
PDCD6-211ENST00000515587 PDE6AP16499 860 aa18.23■□□□□ 0.51
PDCD6-211ENST00000515587 ANGEL2Q5VTE6 544 aaKnown RBP18.23■□□□□ 0.51
PDCD6-211ENST00000515587 FSD1Q9BTV5 496 aa18.23■□□□□ 0.51
PDCD6-211ENST00000515587 GGA3Q9NZ52 723 aa18.23■□□□□ 0.51
PDCD6-211ENST00000515587 PGAP2Q9UHJ9 254 aa18.23■□□□□ 0.51
PDCD6-211ENST00000515587 PCDHAC2Q9Y5I4 1007 aa18.23■□□□□ 0.51
PDCD6-211ENST00000515587 THSD7BQ9C0I4 1608 aa18.23■□□□□ 0.51
PDCD6-211ENST00000515587 PITPNM2Q9BZ72 1349 aa18.23■□□□□ 0.51
PDCD6-211ENST00000515587 ZFYP08048 801 aaPredicted RBP18.22■□□□□ 0.51
PDCD6-211ENST00000515587 ECE1P42892 770 aa18.22■□□□□ 0.51
PDCD6-211ENST00000515587 BTDP43251 543 aa18.22■□□□□ 0.51
PDCD6-211ENST00000515587 APOBEC3FQ8IUX4 373 aaKnown RBP18.22■□□□□ 0.51
PDCD6-211ENST00000515587 ZNF384Q8TF68 577 aa18.22■□□□□ 0.51
PDCD6-211ENST00000515587 RILPL2Q969X0 211 aa18.22■□□□□ 0.51
PDCD6-211ENST00000515587 TDRD3Q9H7E2 651 aaKnown RBP18.22■□□□□ 0.51
PDCD6-211ENST00000515587 VEZTQ9HBM0 779 aa18.22■□□□□ 0.51
PDCD6-211ENST00000515587 GPR75-ASB3A0A0A6YYF3 556 aa18.21■□□□□ 0.51
PDCD6-211ENST00000515587 CLRN2A0PK11 232 aa18.21■□□□□ 0.51
PDCD6-211ENST00000515587 TNRC18O15417 2968 aaPredicted RBP18.21■□□□□ 0.51
PDCD6-211ENST00000515587 PLCG2P16885 1265 aa18.21■□□□□ 0.51
PDCD6-211ENST00000515587 DGKZQ13574 1117 aa18.21■□□□□ 0.51
PDCD6-211ENST00000515587 SPDYE2Q495Y8 402 aa18.21■□□□□ 0.51
PDCD6-211ENST00000515587 TTC22Q5TAA0 569 aa18.21■□□□□ 0.51
PDCD6-211ENST00000515587 APOBEC3HQ6NTF7 200 aaKnown RBP18.21■□□□□ 0.51
PDCD6-211ENST00000515587 CERS3Q8IU89 383 aa18.21■□□□□ 0.51
PDCD6-211ENST00000515587 SULF1Q8IWU6 871 aa18.21■□□□□ 0.51
PDCD6-211ENST00000515587 USP40Q9NVE5 1235 aa18.21■□□□□ 0.51
PDCD6-211ENST00000515587 ZNF70Q9UC06 446 aaPredicted RBP18.21■□□□□ 0.51
PDCD6-211ENST00000515587 ZNF532Q9HCE3 1301 aa18.21■□□□□ 0.51
PDCD6-211ENST00000515587 ADD2P35612 726 aa18.2■□□□□ 0.5
PDCD6-211ENST00000515587 TNFAIP1Q13829 316 aa18.2■□□□□ 0.5
PDCD6-211ENST00000515587 CDC37L1Q7L3B6 337 aa18.2■□□□□ 0.5
PDCD6-211ENST00000515587 TICAM2Q86XR7 235 aa18.2■□□□□ 0.5
PDCD6-211ENST00000515587 ASTN2O75129 1339 aaPredicted RBP18.2■□□□□ 0.5
PDCD6-211ENST00000515587 RNF113AO15541 343 aaKnown RBP18.19■□□□□ 0.5
PDCD6-211ENST00000515587 TNNI2P48788 182 aa18.19■□□□□ 0.5
PDCD6-211ENST00000515587 RGS3P49796 1198 aa18.19■□□□□ 0.5
PDCD6-211ENST00000515587 UBE3CQ15386 1083 aa18.19■□□□□ 0.5
PDCD6-211ENST00000515587 CST9Q5W186 159 aa18.19■□□□□ 0.5
PDCD6-211ENST00000515587 CDC42EP5Q6NZY7 148 aa18.19■□□□□ 0.5
PDCD6-211ENST00000515587 KRT26Q7Z3Y9 468 aa18.19■□□□□ 0.5
PDCD6-211ENST00000515587 AATFQ9NY61 560 aaKnown RBP eCLIP18.19■□□□□ 0.5
PDCD6-211ENST00000515587 MAGEB6P1A0A0J9YX57 407 aa18.18■□□□□ 0.5
PDCD6-211ENST00000515587 TCRBV5S4A2TA0A5A2 114 aa18.17■□□□□ 0.5
PDCD6-211ENST00000515587 TCP10L2B9ZVM9 353 aa18.17■□□□□ 0.5
PDCD6-211ENST00000515587 TRAF5O00463 557 aa18.17■□□□□ 0.5
PDCD6-211ENST00000515587 SOX10P56693 466 aa18.17■□□□□ 0.5
PDCD6-211ENST00000515587 PPP4CP60510 307 aa18.17■□□□□ 0.5
PDCD6-211ENST00000515587 FKBP1CQ5VVH2 108 aa18.17■□□□□ 0.5
PDCD6-211ENST00000515587 ADGRA1Q86SQ6 560 aa18.17■□□□□ 0.5
PDCD6-211ENST00000515587 USP48Q86UV5 1035 aa18.17■□□□□ 0.5
PDCD6-211ENST00000515587 TEX11Q8IYF3 940 aa18.17■□□□□ 0.5
PDCD6-211ENST00000515587 MIGA1Q8NAN2 632 aa18.17■□□□□ 0.5
PDCD6-211ENST00000515587 PPP2R3BQ9Y5P8 575 aa18.17■□□□□ 0.5
PDCD6-211ENST00000515587 RFX7Q2KHR2 1363 aa18.17■□□□□ 0.5
PDCD6-211ENST00000515587 CDK5RAP2Q96SN8 1893 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms