RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 BNIP3Q12983 259 aa8.19□□□□□ -1.1
NEDD4-211ENST00000514893 PKN1Q16512 942 aa8.19□□□□□ -1.1
NEDD4-211ENST00000514893 NETO1Q8TDF5 533 aa8.19□□□□□ -1.1
NEDD4-211ENST00000514893 EHD4Q9H223 541 aa8.19□□□□□ -1.1
NEDD4-211ENST00000514893 VAV3Q9UKW4 847 aa8.19□□□□□ -1.1
NEDD4-211ENST00000514893 TMEM88BA6NKF7 163 aa8.18□□□□□ -1.1
NEDD4-211ENST00000514893 DBX1A6NMT0 343 aa8.18□□□□□ -1.1
NEDD4-211ENST00000514893 PTPN12Q05209 780 aaKnown RBP8.18□□□□□ -1.1
NEDD4-211ENST00000514893 ZNF648Q5T619 568 aaPredicted RBP8.18□□□□□ -1.1
NEDD4-211ENST00000514893 ZNF574Q6ZN55 896 aaPredicted RBP8.18□□□□□ -1.1
NEDD4-211ENST00000514893 PIDD1Q9HB75 910 aa8.18□□□□□ -1.1
NEDD4-211ENST00000514893 PPP1R9AQ9ULJ8 1098 aa8.18□□□□□ -1.1
NEDD4-211ENST00000514893 ECEL1O95672 775 aa8.17□□□□□ -1.1
NEDD4-211ENST00000514893 ITPKAP23677 461 aa8.17□□□□□ -1.1
NEDD4-211ENST00000514893 PI4K2BQ8TCG2 481 aa8.17□□□□□ -1.1
NEDD4-211ENST00000514893 TMEM40Q8WWA1 233 aa8.17□□□□□ -1.1
NEDD4-211ENST00000514893 WDR18Q9BV38 432 aa8.17□□□□□ -1.1
NEDD4-211ENST00000514893 ATXN3LQ9H3M9 355 aa8.17□□□□□ -1.1
NEDD4-211ENST00000514893 ZNF576Q9H609 170 aa8.17□□□□□ -1.1
NEDD4-211ENST00000514893 BRPF3Q9ULD4 1205 aa8.17□□□□□ -1.1
NEDD4-211ENST00000514893 FAM87AP0C7U9 286 aa8.16□□□□□ -1.1
NEDD4-211ENST00000514893 FUT4P22083 530 aa8.16□□□□□ -1.1
NEDD4-211ENST00000514893 PRKCQQ04759 706 aa8.16□□□□□ -1.1
NEDD4-211ENST00000514893 RPS26P11Q5JNZ5 115 aaPredicted RBP8.16□□□□□ -1.1
NEDD4-211ENST00000514893 CARMIL2Q6F5E8 1435 aa8.16□□□□□ -1.1
NEDD4-211ENST00000514893 RC3H2Q9HBD1 1191 aaKnown RBP8.16□□□□□ -1.1
NEDD4-211ENST00000514893 KSR1Q8IVT5 923 aa8.15□□□□□ -1.1
NEDD4-211ENST00000514893 FAM168AQ92567 244 aa8.15□□□□□ -1.1
NEDD4-211ENST00000514893 MKNK2Q9HBH9 465 aa8.15□□□□□ -1.1
NEDD4-211ENST00000514893 ANO2Q9NQ90 1003 aa8.15□□□□□ -1.1
NEDD4-211ENST00000514893 CRIM1Q9NZV1 1036 aa8.15□□□□□ -1.1
NEDD4-211ENST00000514893 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.15□□□□□ -1.1
NEDD4-211ENST00000514893 CD8BP10966 210 aa8.14□□□□□ -1.11
NEDD4-211ENST00000514893 ID3Q02535 119 aa8.14□□□□□ -1.11
NEDD4-211ENST00000514893 PDE3BQ13370 1112 aa8.14□□□□□ -1.11
NEDD4-211ENST00000514893 ARHGAP27Q6ZUM4 889 aa8.14□□□□□ -1.11
NEDD4-211ENST00000514893 SMYD4Q8IYR2 804 aaPredicted RBP8.14□□□□□ -1.11
NEDD4-211ENST00000514893 PLD6Q8N2A8 252 aaKnown RBP8.14□□□□□ -1.11
NEDD4-211ENST00000514893 GLIS3Q8NEA6 775 aa8.14□□□□□ -1.11
NEDD4-211ENST00000514893 SLC38A3Q99624 504 aa8.14□□□□□ -1.11
NEDD4-211ENST00000514893 TMPRSS2O15393 492 aa8.13□□□□□ -1.11
NEDD4-211ENST00000514893 CPNE3O75131 537 aaKnown RBP8.13□□□□□ -1.11
NEDD4-211ENST00000514893 LIG1P18858 919 aa8.13□□□□□ -1.11
NEDD4-211ENST00000514893 CDK5R2Q13319 367 aa8.13□□□□□ -1.11
NEDD4-211ENST00000514893 ZNF124Q15973 351 aa8.13□□□□□ -1.11
NEDD4-211ENST00000514893 USPL1Q5W0Q7 1092 aa8.13□□□□□ -1.11
NEDD4-211ENST00000514893 WFDC3Q8IUB2 231 aa8.13□□□□□ -1.11
NEDD4-211ENST00000514893 MBNL3Q9NUK0 354 aaKnown RBP8.13□□□□□ -1.11
NEDD4-211ENST00000514893 RNASE1P07998 156 aaKnown RBP8.12□□□□□ -1.11
NEDD4-211ENST00000514893 IFI16Q16666 785 aaKnown RBP8.12□□□□□ -1.11
NEDD4-211ENST00000514893 PHLDB3Q6NSJ2 640 aa8.12□□□□□ -1.11
NEDD4-211ENST00000514893 FAM181AQ8N9Y4 354 aa8.12□□□□□ -1.11
NEDD4-211ENST00000514893 FANCD2OSQ96PS1 177 aa8.12□□□□□ -1.11
NEDD4-211ENST00000514893 EGFL7Q9UHF1 273 aa8.12□□□□□ -1.11
NEDD4-211ENST00000514893 PCOLCE2Q9UKZ9 415 aa8.12□□□□□ -1.11
NEDD4-211ENST00000514893 TMEM265A0A087WTH1 108 aa8.11□□□□□ -1.11
NEDD4-211ENST00000514893 ICMTO60725 284 aa8.11□□□□□ -1.11
NEDD4-211ENST00000514893 RNGTTO60942 597 aaKnown RBP8.11□□□□□ -1.11
NEDD4-211ENST00000514893 ZNF211Q13398 564 aaPredicted RBP8.11□□□□□ -1.11
NEDD4-211ENST00000514893 AOC3Q16853 763 aa8.11□□□□□ -1.11
NEDD4-211ENST00000514893 FBLN7Q53RD9 439 aa8.11□□□□□ -1.11
NEDD4-211ENST00000514893 HRASLS5Q96KN8 279 aa8.11□□□□□ -1.11
NEDD4-211ENST00000514893 CCDC86Q9H6F5 360 aaKnown RBP8.11□□□□□ -1.11
NEDD4-211ENST00000514893 DISC1Q9NRI5 854 aa8.11□□□□□ -1.11
NEDD4-211ENST00000514893 TRAK1Q9UPV9 953 aa8.11□□□□□ -1.11
NEDD4-211ENST00000514893 TMEM238LA0A1B0GVL6 79 aa8.1□□□□□ -1.11
NEDD4-211ENST00000514893 NDUFB5O43674 189 aa8.1□□□□□ -1.11
NEDD4-211ENST00000514893 KIF4BQ2VIQ3 1234 aa8.1□□□□□ -1.11
NEDD4-211ENST00000514893 CITED4Q96RK1 184 aa8.1□□□□□ -1.11
NEDD4-211ENST00000514893 KRTAP4-9Q9BYQ8 210 aa8.1□□□□□ -1.11
NEDD4-211ENST00000514893 KRT82Q9NSB4 513 aa8.1□□□□□ -1.11
NEDD4-211ENST00000514893 PPP4R2Q9NY27 417 aa8.1□□□□□ -1.11
NEDD4-211ENST00000514893 WDR89Q96FK6 387 aaPredicted RBP8.09□□□□□ -1.11
NEDD4-211ENST00000514893 ZC3H12CQ9C0D7 883 aaKnown RBP8.09□□□□□ -1.11
NEDD4-211ENST00000514893 DNAJC25Q9H1X3 360 aa8.09□□□□□ -1.11
NEDD4-211ENST00000514893 SSU72Q9NP77 194 aaKnown RBP8.09□□□□□ -1.11
NEDD4-211ENST00000514893 FAM53CQ9NYF3 392 aa8.09□□□□□ -1.11
NEDD4-211ENST00000514893 GADD45BO75293 160 aaPredicted RBP8.08□□□□□ -1.12
NEDD4-211ENST00000514893 GSTP1P09211 210 aaKnown RBP8.08□□□□□ -1.12
NEDD4-211ENST00000514893 PPP2R3AQ06190 1150 aa8.08□□□□□ -1.12
NEDD4-211ENST00000514893 ANGEL2Q5VTE6 544 aaKnown RBP8.08□□□□□ -1.12
NEDD4-211ENST00000514893 PRPF40BQ6NWY9 871 aaKnown RBP8.08□□□□□ -1.12
NEDD4-211ENST00000514893 SLC23A3Q6PIS1 610 aa8.08□□□□□ -1.12
NEDD4-211ENST00000514893 FAM84AQ96KN4 292 aa8.08□□□□□ -1.12
NEDD4-211ENST00000514893 NPHS2Q9NP85 383 aa8.08□□□□□ -1.12
NEDD4-211ENST00000514893 ADAMTS6Q9UKP5 1117 aa8.08□□□□□ -1.12
NEDD4-211ENST00000514893 SNX11Q9Y5W9 270 aa8.08□□□□□ -1.12
NEDD4-211ENST00000514893 ARID3CA6NKF2 412 aa8.07□□□□□ -1.12
NEDD4-211ENST00000514893 ZNF862O60290 1169 aa8.07□□□□□ -1.12
NEDD4-211ENST00000514893 ZNF157P51786 506 aaPredicted RBP8.07□□□□□ -1.12
NEDD4-211ENST00000514893 OXCT1P55809 520 aa8.07□□□□□ -1.12
NEDD4-211ENST00000514893 TTLL4Q14679 1199 aa8.07□□□□□ -1.12
NEDD4-211ENST00000514893 KRTAP19-4Q3LI73 84 aa8.07□□□□□ -1.12
NEDD4-211ENST00000514893 B4GALNT3Q6L9W6 998 aa8.07□□□□□ -1.12
NEDD4-211ENST00000514893 GLYCTKQ8IVS8 523 aa8.07□□□□□ -1.12
NEDD4-211ENST00000514893 LRRN4CLQ8ND94 238 aa8.07□□□□□ -1.12
NEDD4-211ENST00000514893 BHLHE22Q8NFJ8 381 aaPredicted RBP8.07□□□□□ -1.12
NEDD4-211ENST00000514893 CCDC74AQ96AQ1 378 aa8.07□□□□□ -1.12
NEDD4-211ENST00000514893 DUSP23Q9BVJ7 150 aa8.07□□□□□ -1.12
NEDD4-211ENST00000514893 ABCB6Q9NP58 842 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms