RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 CCT2P78371 535 aaKnown RBP17.58■□□□□ 0.41
VCAN-211ENST00000513984 AKNAD1Q5T1N1 836 aa17.58■□□□□ 0.41
VCAN-211ENST00000513984 USP48Q86UV5 1035 aa17.58■□□□□ 0.41
VCAN-211ENST00000513984 STAG1Q8WVM7 1258 aa17.58■□□□□ 0.41
VCAN-211ENST00000513984 TMEM87BQ96K49 555 aa17.58■□□□□ 0.41
VCAN-211ENST00000513984 BRPF3Q9ULD4 1205 aa17.58■□□□□ 0.41
VCAN-211ENST00000513984 ANGEL1Q9UNK9 670 aaKnown RBP17.58■□□□□ 0.41
VCAN-211ENST00000513984 KIF3AQ9Y496 699 aa17.58■□□□□ 0.41
VCAN-211ENST00000513984 KLF18A0A0U1RQI7 1052 aa17.58■□□□□ 0.4
VCAN-211ENST00000513984 SH2B2O14492 632 aaPredicted RBP17.58■□□□□ 0.4
VCAN-211ENST00000513984 GPSM2P81274 684 aa17.58■□□□□ 0.4
VCAN-211ENST00000513984 CTDSPL2Q05D32 466 aa17.58■□□□□ 0.4
VCAN-211ENST00000513984 CAVIN1Q6NZI2 390 aaKnown RBP17.58■□□□□ 0.4
VCAN-211ENST00000513984 TDRD7Q8NHU6 1098 aaKnown RBP17.58■□□□□ 0.4
VCAN-211ENST00000513984 NKX2-3Q8TAU0 364 aa17.58■□□□□ 0.4
VCAN-211ENST00000513984 GDPD2Q9HCC8 539 aa17.58■□□□□ 0.4
VCAN-211ENST00000513984 NCOA5Q9HCD5 579 aaKnown RBP17.58■□□□□ 0.4
VCAN-211ENST00000513984 HPS5Q9UPZ3 1129 aa17.58■□□□□ 0.4
VCAN-211ENST00000513984 NCLP19338 710 aaKnown RBP17.57■□□□□ 0.4
VCAN-211ENST00000513984 ATP2B4P23634 1241 aa17.57■□□□□ 0.4
VCAN-211ENST00000513984 MECOMQ03112 1051 aa17.57■□□□□ 0.4
VCAN-211ENST00000513984 CHAF1AQ13111 956 aaPredicted RBP17.57■□□□□ 0.4
VCAN-211ENST00000513984 ZNF804AQ7Z570 1209 aa17.57■□□□□ 0.4
VCAN-211ENST00000513984 FAM184AQ8NB25 1140 aa17.57■□□□□ 0.4
VCAN-211ENST00000513984 KRT23Q9C075 422 aa17.57■□□□□ 0.4
VCAN-211ENST00000513984 PODXL2Q9NZ53 605 aa17.57■□□□□ 0.4
VCAN-211ENST00000513984 ANAPC4Q9UJX5 808 aa17.57■□□□□ 0.4
VCAN-211ENST00000513984 NAP1L2Q9ULW6 460 aaPredicted RBP17.57■□□□□ 0.4
VCAN-211ENST00000513984 TACC3Q9Y6A5 838 aa17.57■□□□□ 0.4
VCAN-211ENST00000513984 DLEC1Q9Y238 1755 aa17.56■□□□□ 0.4
VCAN-211ENST00000513984 GOLGA8BA8MQT2 603 aa17.56■□□□□ 0.4
VCAN-211ENST00000513984 PRDX5P30044 214 aa17.56■□□□□ 0.4
VCAN-211ENST00000513984 CSPP1Q1MSJ5 1256 aa17.56■□□□□ 0.4
VCAN-211ENST00000513984 SPTY2D1Q68D10 685 aaPredicted RBP17.56■□□□□ 0.4
VCAN-211ENST00000513984 MFSD6Q6ZSS7 791 aa17.56■□□□□ 0.4
VCAN-211ENST00000513984 TMC4Q7Z404 712 aa17.56■□□□□ 0.4
VCAN-211ENST00000513984 DDX11Q96FC9 970 aa17.56■□□□□ 0.4
VCAN-211ENST00000513984 BRIP1Q9BX63 1249 aa17.56■□□□□ 0.4
VCAN-211ENST00000513984 NSFL1CQ9UNZ2 370 aaKnown RBP17.56■□□□□ 0.4
VCAN-211ENST00000513984 CDK5RAP2Q96SN8 1893 aa17.56■□□□□ 0.4
VCAN-211ENST00000513984 DHX16O60231 1041 aaKnown RBP17.56■□□□□ 0.4
VCAN-211ENST00000513984 DNM1Q05193 864 aaKnown RBP17.56■□□□□ 0.4
VCAN-211ENST00000513984 GIMAP6Q6P9H5 292 aa17.56■□□□□ 0.4
VCAN-211ENST00000513984 WDR66Q8TBY9 1149 aa17.56■□□□□ 0.4
VCAN-211ENST00000513984 IGDCC4Q8TDY8 1250 aa17.56■□□□□ 0.4
VCAN-211ENST00000513984 SDR42E1Q8WUS8 393 aa17.56■□□□□ 0.4
VCAN-211ENST00000513984 ZNF445P59923 1031 aa17.55■□□□□ 0.4
VCAN-211ENST00000513984 DYNLL1P63167 89 aaKnown RBP17.55■□□□□ 0.4
VCAN-211ENST00000513984 PPARAQ07869 468 aa17.55■□□□□ 0.4
VCAN-211ENST00000513984 SGMS1Q86VZ5 419 aa17.55■□□□□ 0.4
VCAN-211ENST00000513984 MTA3Q9BTC8 594 aa17.55■□□□□ 0.4
VCAN-211ENST00000513984 RNF41Q9H4P4 317 aaPredicted RBP17.55■□□□□ 0.4
VCAN-211ENST00000513984 GGA1Q9UJY5 639 aa17.55■□□□□ 0.4
VCAN-211ENST00000513984 GADD45BO75293 160 aaPredicted RBP17.54■□□□□ 0.4
VCAN-211ENST00000513984 UFL1O94874 794 aa17.54■□□□□ 0.4
VCAN-211ENST00000513984 LIFRP42702 1097 aa17.54■□□□□ 0.4
VCAN-211ENST00000513984 ZSCAN23Q3MJ62 389 aa17.54■□□□□ 0.4
VCAN-211ENST00000513984 FERMT3Q86UX7 667 aa17.54■□□□□ 0.4
VCAN-211ENST00000513984 ZSWIM5Q9P217 1185 aa17.54■□□□□ 0.4
VCAN-211ENST00000513984 H3BQV1 296 aa17.54■□□□□ 0.4
VCAN-211ENST00000513984 FIBPO43427 364 aa17.54■□□□□ 0.4
VCAN-211ENST00000513984 KDM4AO75164 1064 aa17.54■□□□□ 0.4
VCAN-211ENST00000513984 KRT85P78386 507 aa17.54■□□□□ 0.4
VCAN-211ENST00000513984 RESTQ13127 1097 aa17.54■□□□□ 0.4
VCAN-211ENST00000513984 IFFO2Q5TF58 517 aa17.54■□□□□ 0.4
VCAN-211ENST00000513984 LY9Q9HBG7 655 aa17.54■□□□□ 0.4
VCAN-211ENST00000513984 INCENPQ9NQS7 918 aa17.54■□□□□ 0.4
VCAN-211ENST00000513984 TMEM63CQ9P1W3 806 aa17.54■□□□□ 0.4
VCAN-211ENST00000513984 RGS17Q9UGC6 210 aaPredicted RBP17.54■□□□□ 0.4
VCAN-211ENST00000513984 NAV1Q8NEY1 1877 aa17.53■□□□□ 0.4
VCAN-211ENST00000513984 UBE2HP62256 183 aa17.53■□□□□ 0.4
VCAN-211ENST00000513984 APOA5Q6Q788 366 aa17.53■□□□□ 0.4
VCAN-211ENST00000513984 GAS2L3Q86XJ1 694 aa17.53■□□□□ 0.4
VCAN-211ENST00000513984 ZSCAN16Q9H4T2 348 aaPredicted RBP17.53■□□□□ 0.4
VCAN-211ENST00000513984 NID2Q14112 1375 aa17.52■□□□□ 0.4
VCAN-211ENST00000513984 FDPSP14324 419 aaKnown RBP17.52■□□□□ 0.4
VCAN-211ENST00000513984 IL1R1P14778 569 aa17.52■□□□□ 0.4
VCAN-211ENST00000513984 MRE11P49959 708 aa17.52■□□□□ 0.4
VCAN-211ENST00000513984 TMEM67Q5HYA8 995 aa17.52■□□□□ 0.4
VCAN-211ENST00000513984 DZIP1Q86YF9 867 aaKnown RBP17.52■□□□□ 0.4
VCAN-211ENST00000513984 GPR101Q96P66 508 aaPredicted RBP17.52■□□□□ 0.4
VCAN-211ENST00000513984 RBM27Q9P2N5 1060 aaKnown RBP17.52■□□□□ 0.4
VCAN-211ENST00000513984 ELP1O95163 1332 aa17.52■□□□□ 0.4
VCAN-211ENST00000513984 PPEF1O14829 653 aaPredicted RBP17.51■□□□□ 0.39
VCAN-211ENST00000513984 LDHBP07195 334 aaKnown RBP17.51■□□□□ 0.39
VCAN-211ENST00000513984 SRGNP10124 158 aa17.51■□□□□ 0.39
VCAN-211ENST00000513984 SP8Q8IXZ3 490 aa17.51■□□□□ 0.39
VCAN-211ENST00000513984 TBC1D16Q8TBP0 767 aa17.51■□□□□ 0.39
VCAN-211ENST00000513984 CRNKL1Q9BZJ0 848 aaKnown RBP17.51■□□□□ 0.39
VCAN-211ENST00000513984 CD209Q9NNX6 404 aa17.51■□□□□ 0.39
VCAN-211ENST00000513984 AATFQ9NY61 560 aaKnown RBP eCLIP17.51■□□□□ 0.39
VCAN-211ENST00000513984 MYH6P13533 1939 aa17.51■□□□□ 0.39
VCAN-211ENST00000513984 PCP11498 1178 aaKnown RBP17.51■□□□□ 0.39
VCAN-211ENST00000513984 SYAP1Q96A49 352 aaPredicted RBP17.51■□□□□ 0.39
VCAN-211ENST00000513984 GRPEL1Q9HAV7 217 aa17.51■□□□□ 0.39
VCAN-211ENST00000513984 SENP2Q9HC62 589 aa17.51■□□□□ 0.39
VCAN-211ENST00000513984 ATP8A2Q9NTI2 1148 aa17.51■□□□□ 0.39
VCAN-211ENST00000513984 POLLQ9UGP5 575 aa17.51■□□□□ 0.39
VCAN-211ENST00000513984 JAG2Q9Y219 1238 aa17.51■□□□□ 0.39
VCAN-211ENST00000513984 FOCADQ5VW36 1801 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms