RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 GRIA4P48058 902 aa6.85□□□□□ -1.31
CLDND1-228ENST00000513873 GP2P55259 537 aaKnown RBP6.85□□□□□ -1.31
CLDND1-228ENST00000513873 FCGRTP55899 365 aa6.85□□□□□ -1.31
CLDND1-228ENST00000513873 PTPN12Q05209 780 aaKnown RBP6.85□□□□□ -1.31
CLDND1-228ENST00000513873 PCDH1Q08174 1060 aa6.85□□□□□ -1.31
CLDND1-228ENST00000513873 SPRED3Q2MJR0 410 aa6.85□□□□□ -1.31
CLDND1-228ENST00000513873 PRPF40BQ6NWY9 871 aaKnown RBP6.85□□□□□ -1.31
CLDND1-228ENST00000513873 DNAJC14Q6Y2X3 702 aaPredicted RBP6.85□□□□□ -1.31
CLDND1-228ENST00000513873 WWC3Q9ULE0 1092 aa6.85□□□□□ -1.31
CLDND1-228ENST00000513873 LOC105371045A0A1W2PR82 267 aa6.84□□□□□ -1.31
CLDND1-228ENST00000513873 DLL1O00548 723 aa6.84□□□□□ -1.31
CLDND1-228ENST00000513873 MFAP1P55081 439 aaKnown RBP6.84□□□□□ -1.31
CLDND1-228ENST00000513873 GSTM4Q03013 218 aa6.84□□□□□ -1.31
CLDND1-228ENST00000513873 DUOXA2Q1HG44 320 aa6.84□□□□□ -1.31
CLDND1-228ENST00000513873 ZNF326Q5BKZ1 582 aaKnown RBP6.84□□□□□ -1.31
CLDND1-228ENST00000513873 NXPE4Q6UWF7 544 aa6.84□□□□□ -1.31
CLDND1-228ENST00000513873 PI16Q6UXB8 463 aa6.84□□□□□ -1.31
CLDND1-228ENST00000513873 VN1R5Q7Z5H4 357 aa6.84□□□□□ -1.31
CLDND1-228ENST00000513873 AKAP2Q9Y2D5 859 aa6.84□□□□□ -1.31
CLDND1-228ENST00000513873 OAS3Q9Y6K5 1087 aaKnown RBP6.84□□□□□ -1.31
CLDND1-228ENST00000513873 PLB1Q6P1J6 1458 aa6.84□□□□□ -1.31
CLDND1-228ENST00000513873 TEX14Q8IWB6 1497 aa6.84□□□□□ -1.31
CLDND1-228ENST00000513873 KIF27Q86VH2 1401 aa6.84□□□□□ -1.32
CLDND1-228ENST00000513873 SOX1O00570 391 aaPredicted RBP6.83□□□□□ -1.32
CLDND1-228ENST00000513873 ESRRAP11474 423 aaPredicted RBP6.83□□□□□ -1.32
CLDND1-228ENST00000513873 EIF4BP23588 611 aaKnown RBP6.83□□□□□ -1.32
CLDND1-228ENST00000513873 GSTT1P30711 240 aa6.83□□□□□ -1.32
CLDND1-228ENST00000513873 CD97P48960 835 aa6.83□□□□□ -1.32
CLDND1-228ENST00000513873 JAG1P78504 1218 aa6.83□□□□□ -1.32
CLDND1-228ENST00000513873 HNRNPUQ00839 825 aaKnown RBP eCLIP6.83□□□□□ -1.32
CLDND1-228ENST00000513873 PPP2R3AQ06190 1150 aa6.83□□□□□ -1.32
CLDND1-228ENST00000513873 RPS26P11Q5JNZ5 115 aaPredicted RBP6.83□□□□□ -1.32
CLDND1-228ENST00000513873 NPAS4Q8IUM7 802 aa6.83□□□□□ -1.32
CLDND1-228ENST00000513873 KLHDC7BQ96G42 594 aa6.83□□□□□ -1.32
CLDND1-228ENST00000513873 SOX17Q9H6I2 414 aaPredicted RBP6.83□□□□□ -1.32
CLDND1-228ENST00000513873 MAP3K4Q9Y6R4 1608 aa6.83□□□□□ -1.32
CLDND1-228ENST00000513873 ITPKAP23677 461 aa6.82□□□□□ -1.32
CLDND1-228ENST00000513873 GNA15P30679 374 aa6.82□□□□□ -1.32
CLDND1-228ENST00000513873 NLRP12P59046 1061 aa6.82□□□□□ -1.32
CLDND1-228ENST00000513873 PSMD2Q13200 908 aa6.82□□□□□ -1.32
CLDND1-228ENST00000513873 HP1BP3Q5SSJ5 553 aaPredicted RBP6.82□□□□□ -1.32
CLDND1-228ENST00000513873 ADAMTSL4Q6UY14 1074 aa6.82□□□□□ -1.32
CLDND1-228ENST00000513873 PRR23CQ6ZRP0 262 aa6.82□□□□□ -1.32
CLDND1-228ENST00000513873 GALNT11Q8NCW6 608 aa6.82□□□□□ -1.32
CLDND1-228ENST00000513873 SETDB2Q96T68 719 aa6.82□□□□□ -1.32
CLDND1-228ENST00000513873 DUSP9Q99956 384 aaKnown RBP6.82□□□□□ -1.32
CLDND1-228ENST00000513873 BCL2L13Q9BXK5 485 aa6.82□□□□□ -1.32
CLDND1-228ENST00000513873 MRS2Q9HD23 443 aa6.82□□□□□ -1.32
CLDND1-228ENST00000513873 ABCB6Q9NP58 842 aa6.82□□□□□ -1.32
CLDND1-228ENST00000513873 PCF11O94913 1555 aaKnown RBP6.82□□□□□ -1.32
CLDND1-228ENST00000513873 CYP11A1P05108 521 aa6.81□□□□□ -1.32
CLDND1-228ENST00000513873 FSTP19883 344 aa6.81□□□□□ -1.32
CLDND1-228ENST00000513873 ACAD11Q709F0 780 aa6.81□□□□□ -1.32
CLDND1-228ENST00000513873 WFDC12Q8WWY7 111 aa6.81□□□□□ -1.32
CLDND1-228ENST00000513873 USP26Q9BXU7 913 aa6.81□□□□□ -1.32
CLDND1-228ENST00000513873 ZNF576Q9H609 170 aa6.81□□□□□ -1.32
CLDND1-228ENST00000513873 C12orf49Q9H741 205 aa6.81□□□□□ -1.32
CLDND1-228ENST00000513873 AKTIPQ9H8T0 292 aa6.81□□□□□ -1.32
CLDND1-228ENST00000513873 FAM8A1Q9UBU6 413 aa6.81□□□□□ -1.32
CLDND1-228ENST00000513873 GPN3Q9UHW5 284 aaPredicted RBP6.81□□□□□ -1.32
CLDND1-228ENST00000513873 PTPRMP28827 1452 aa6.8□□□□□ -1.32
CLDND1-228ENST00000513873 IREB2P48200 963 aaKnown RBP6.8□□□□□ -1.32
CLDND1-228ENST00000513873 ASXL2Q76L83 1435 aa6.8□□□□□ -1.32
CLDND1-228ENST00000513873 TMEM130Q8N3G9 435 aa6.8□□□□□ -1.32
CLDND1-228ENST00000513873 CORO1BQ9BR76 489 aa6.8□□□□□ -1.32
CLDND1-228ENST00000513873 CEP44Q9C0F1 390 aa6.8□□□□□ -1.32
CLDND1-228ENST00000513873 CCDC9Q9Y3X0 531 aaKnown RBP6.8□□□□□ -1.32
CLDND1-228ENST00000513873 ADAMTSL3P82987 1691 aa6.8□□□□□ -1.32
CLDND1-228ENST00000513873 ERICH3Q5RHP9 1530 aa6.8□□□□□ -1.32
CLDND1-228ENST00000513873 DDX3YO15523 660 aaKnown RBP6.79□□□□□ -1.32
CLDND1-228ENST00000513873 B3GALT4O96024 378 aa6.79□□□□□ -1.32
CLDND1-228ENST00000513873 GLB1P16278 677 aa6.79□□□□□ -1.32
CLDND1-228ENST00000513873 AP3B2Q13367 1082 aa6.79□□□□□ -1.32
CLDND1-228ENST00000513873 ZNF423Q2M1K9 1284 aa6.79□□□□□ -1.32
CLDND1-228ENST00000513873 GLIS3Q8NEA6 775 aa6.79□□□□□ -1.32
CLDND1-228ENST00000513873 RUSC1Q9BVN2 902 aa6.79□□□□□ -1.32
CLDND1-228ENST00000513873 CEP41Q9BYV8 373 aa6.79□□□□□ -1.32
CLDND1-228ENST00000513873 OSBPL7Q9BZF2 842 aa6.79□□□□□ -1.32
CLDND1-228ENST00000513873 TMEM39AQ9NV64 488 aa6.79□□□□□ -1.32
CLDND1-228ENST00000513873 PARP2Q9UGN5 583 aa6.79□□□□□ -1.32
CLDND1-228ENST00000513873 SAMM50Q9Y512 469 aa6.79□□□□□ -1.32
CLDND1-228ENST00000513873 AK5Q9Y6K8 562 aa6.79□□□□□ -1.32
CLDND1-228ENST00000513873 RUSC2Q8N2Y8 1516 aa6.79□□□□□ -1.32
CLDND1-228ENST00000513873 ABCC2Q92887 1545 aa6.79□□□□□ -1.32
CLDND1-228ENST00000513873 KIAA0586Q9BVV6 1533 aa6.79□□□□□ -1.32
CLDND1-228ENST00000513873 TNIKQ9UKE5 1360 aa6.79□□□□□ -1.32
CLDND1-228ENST00000513873 GOLGA3Q08378 1498 aa6.79□□□□□ -1.32
CLDND1-228ENST00000513873 SART1O43290 800 aaKnown RBP6.78□□□□□ -1.32
CLDND1-228ENST00000513873 USP17L7P0C7H9 530 aa6.78□□□□□ -1.32
CLDND1-228ENST00000513873 ZNF157P51786 506 aaPredicted RBP6.78□□□□□ -1.32
CLDND1-228ENST00000513873 POU4F3Q15319 338 aa6.78□□□□□ -1.32
CLDND1-228ENST00000513873 GIPC2Q8TF65 315 aa6.78□□□□□ -1.32
CLDND1-228ENST00000513873 RNF208Q9H0X6 261 aa6.78□□□□□ -1.32
CLDND1-228ENST00000513873 PPM1HQ9ULR3 514 aa6.78□□□□□ -1.32
CLDND1-228ENST00000513873 KIF21BO75037 1637 aa6.78□□□□□ -1.32
CLDND1-228ENST00000513873 BIVM-ERCC5R4GMW8 1640 aa6.77□□□□□ -1.33
CLDND1-228ENST00000513873 F8W735 103 aaPredicted RBP6.77□□□□□ -1.33
CLDND1-228ENST00000513873 GSC2O15499 205 aa6.77□□□□□ -1.33
CLDND1-228ENST00000513873 SORBS3O60504 671 aa6.77□□□□□ -1.33
CLDND1-228ENST00000513873 NUTM2GQ5VZR2 741 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms