RNA–Protein interactions for RNA: ENST00000513636.1

ATP2C1-220, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-220ENST00000513636 BNIP3Q12983 259 aa7.2□□□□□ -1.26
ATP2C1-220ENST00000513636 AP3B2Q13367 1082 aa7.2□□□□□ -1.26
ATP2C1-220ENST00000513636 PI4K2BQ8TCG2 481 aa7.2□□□□□ -1.26
ATP2C1-220ENST00000513636 NETO1Q8TDF5 533 aa7.2□□□□□ -1.26
ATP2C1-220ENST00000513636 TCF12Q99081 682 aa7.2□□□□□ -1.26
ATP2C1-220ENST00000513636 SLC38A3Q99624 504 aa7.2□□□□□ -1.26
ATP2C1-220ENST00000513636 RC3H2Q9HBD1 1191 aaKnown RBP7.2□□□□□ -1.26
ATP2C1-220ENST00000513636 B3GALT4O96024 378 aa7.19□□□□□ -1.26
ATP2C1-220ENST00000513636 SPRED2Q7Z698 418 aa7.19□□□□□ -1.26
ATP2C1-220ENST00000513636 ATG4DQ86TL0 474 aaPredicted RBP7.19□□□□□ -1.26
ATP2C1-220ENST00000513636 FAM168AQ92567 244 aa7.19□□□□□ -1.26
ATP2C1-220ENST00000513636 ATXN3LQ9H3M9 355 aa7.19□□□□□ -1.26
ATP2C1-220ENST00000513636 DBX1A6NMT0 343 aa7.18□□□□□ -1.26
ATP2C1-220ENST00000513636 DYNC1LI2O43237 492 aaPredicted RBP7.18□□□□□ -1.26
ATP2C1-220ENST00000513636 RNGTTO60942 597 aaKnown RBP7.18□□□□□ -1.26
ATP2C1-220ENST00000513636 ECEL1O95672 775 aa7.18□□□□□ -1.26
ATP2C1-220ENST00000513636 FAM87AP0C7U9 286 aa7.18□□□□□ -1.26
ATP2C1-220ENST00000513636 ZNF124Q15973 351 aa7.18□□□□□ -1.26
ATP2C1-220ENST00000513636 KIAA0319Q5VV43 1072 aa7.18□□□□□ -1.26
ATP2C1-220ENST00000513636 SEZ6L2Q6UXD5 910 aa7.18□□□□□ -1.26
ATP2C1-220ENST00000513636 TRIM56Q9BRZ2 755 aaKnown RBP7.18□□□□□ -1.26
ATP2C1-220ENST00000513636 WDR18Q9BV38 432 aa7.18□□□□□ -1.26
ATP2C1-220ENST00000513636 KRTAP4-11Q9BYQ6 195 aa7.18□□□□□ -1.26
ATP2C1-220ENST00000513636 GSX1Q9H4S2 264 aaPredicted RBP7.18□□□□□ -1.26
ATP2C1-220ENST00000513636 SSU72Q9NP77 194 aaKnown RBP7.18□□□□□ -1.26
ATP2C1-220ENST00000513636 VAV3Q9UKW4 847 aa7.18□□□□□ -1.26
ATP2C1-220ENST00000513636 LIG1P18858 919 aa7.17□□□□□ -1.26
ATP2C1-220ENST00000513636 ZNF211Q13398 564 aaPredicted RBP7.17□□□□□ -1.26
ATP2C1-220ENST00000513636 ZC3H12CQ9C0D7 883 aaKnown RBP7.17□□□□□ -1.26
ATP2C1-220ENST00000513636 ZNF576Q9H609 170 aa7.17□□□□□ -1.26
ATP2C1-220ENST00000513636 SYNGAP1Q96PV0 1343 aa7.17□□□□□ -1.26
ATP2C1-220ENST00000513636 PPP1R15AO75807 674 aaPredicted RBP7.16□□□□□ -1.26
ATP2C1-220ENST00000513636 CD8BP10966 210 aa7.16□□□□□ -1.26
ATP2C1-220ENST00000513636 PRKCQQ04759 706 aa7.16□□□□□ -1.26
ATP2C1-220ENST00000513636 CDK5R2Q13319 367 aa7.16□□□□□ -1.26
ATP2C1-220ENST00000513636 SMYD4Q8IYR2 804 aaPredicted RBP7.16□□□□□ -1.26
ATP2C1-220ENST00000513636 PLD6Q8N2A8 252 aaKnown RBP7.16□□□□□ -1.26
ATP2C1-220ENST00000513636 FAM181AQ8N9Y4 354 aa7.16□□□□□ -1.26
ATP2C1-220ENST00000513636 TMEM40Q8WWA1 233 aa7.16□□□□□ -1.26
ATP2C1-220ENST00000513636 PPP1R9AQ9ULJ8 1098 aa7.16□□□□□ -1.26
ATP2C1-220ENST00000513636 CPNE3O75131 537 aaKnown RBP7.15□□□□□ -1.26
ATP2C1-220ENST00000513636 GADD45BO75293 160 aaPredicted RBP7.15□□□□□ -1.26
ATP2C1-220ENST00000513636 FUT4P22083 530 aa7.15□□□□□ -1.26
ATP2C1-220ENST00000513636 ITPKAP23677 461 aa7.15□□□□□ -1.26
ATP2C1-220ENST00000513636 ID3Q02535 119 aa7.15□□□□□ -1.26
ATP2C1-220ENST00000513636 PDE3BQ13370 1112 aa7.15□□□□□ -1.26
ATP2C1-220ENST00000513636 AOC3Q16853 763 aa7.15□□□□□ -1.26
ATP2C1-220ENST00000513636 LCE4AQ5TA78 99 aa7.15□□□□□ -1.26
ATP2C1-220ENST00000513636 TMEM88BA6NKF7 163 aa7.14□□□□□ -1.27
ATP2C1-220ENST00000513636 NDUFB5O43674 189 aa7.14□□□□□ -1.27
ATP2C1-220ENST00000513636 ZNF157P51786 506 aaPredicted RBP7.14□□□□□ -1.27
ATP2C1-220ENST00000513636 IFI16Q16666 785 aaKnown RBP7.14□□□□□ -1.27
ATP2C1-220ENST00000513636 USPL1Q5W0Q7 1092 aa7.14□□□□□ -1.27
ATP2C1-220ENST00000513636 TMC1Q8TDI8 760 aa7.14□□□□□ -1.27
ATP2C1-220ENST00000513636 HRASLS5Q96KN8 279 aa7.14□□□□□ -1.27
ATP2C1-220ENST00000513636 PPP4R2Q9NY27 417 aa7.14□□□□□ -1.27
ATP2C1-220ENST00000513636 CRIM1Q9NZV1 1036 aa7.14□□□□□ -1.27
ATP2C1-220ENST00000513636 CARMIL2Q6F5E8 1435 aa7.13□□□□□ -1.27
ATP2C1-220ENST00000513636 TMEM265A0A087WTH1 108 aa7.13□□□□□ -1.27
ATP2C1-220ENST00000513636 ARID3CA6NKF2 412 aa7.13□□□□□ -1.27
ATP2C1-220ENST00000513636 TMPRSS2O15393 492 aa7.13□□□□□ -1.27
ATP2C1-220ENST00000513636 RNASE1P07998 156 aaKnown RBP7.13□□□□□ -1.27
ATP2C1-220ENST00000513636 PTPN12Q05209 780 aaKnown RBP7.13□□□□□ -1.27
ATP2C1-220ENST00000513636 GLYCTKQ8IVS8 523 aa7.13□□□□□ -1.27
ATP2C1-220ENST00000513636 FANCD2OSQ96PS1 177 aa7.13□□□□□ -1.27
ATP2C1-220ENST00000513636 NPHS2Q9NP85 383 aa7.13□□□□□ -1.27
ATP2C1-220ENST00000513636 PCOLCE2Q9UKZ9 415 aa7.13□□□□□ -1.27
ATP2C1-220ENST00000513636 TRAK1Q9UPV9 953 aa7.13□□□□□ -1.27
ATP2C1-220ENST00000513636 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.13□□□□□ -1.27
ATP2C1-220ENST00000513636 PPP2R3AQ06190 1150 aa7.12□□□□□ -1.27
ATP2C1-220ENST00000513636 RPS26P11Q5JNZ5 115 aaPredicted RBP7.12□□□□□ -1.27
ATP2C1-220ENST00000513636 ANGEL2Q5VTE6 544 aaKnown RBP7.12□□□□□ -1.27
ATP2C1-220ENST00000513636 GLIS3Q8NEA6 775 aa7.12□□□□□ -1.27
ATP2C1-220ENST00000513636 CCDC86Q9H6F5 360 aaKnown RBP7.12□□□□□ -1.27
ATP2C1-220ENST00000513636 MKNK2Q9HBH9 465 aa7.12□□□□□ -1.27
ATP2C1-220ENST00000513636 MBNL3Q9NUK0 354 aaKnown RBP7.12□□□□□ -1.27
ATP2C1-220ENST00000513636 HCLS1P14317 486 aaPredicted RBP7.11□□□□□ -1.27
ATP2C1-220ENST00000513636 TTLL4Q14679 1199 aa7.11□□□□□ -1.27
ATP2C1-220ENST00000513636 B4GALNT3Q6L9W6 998 aa7.11□□□□□ -1.27
ATP2C1-220ENST00000513636 KCNB2Q92953 911 aa7.11□□□□□ -1.27
ATP2C1-220ENST00000513636 KRTAP4-5Q9BYR2 181 aa7.11□□□□□ -1.27
ATP2C1-220ENST00000513636 FAM53CQ9NYF3 392 aa7.11□□□□□ -1.27
ATP2C1-220ENST00000513636 TMEM238LA0A1B0GVL6 79 aa7.1□□□□□ -1.27
ATP2C1-220ENST00000513636 ICMTO60725 284 aa7.1□□□□□ -1.27
ATP2C1-220ENST00000513636 CEACAM5P06731 702 aa7.1□□□□□ -1.27
ATP2C1-220ENST00000513636 GSTP1P09211 210 aaKnown RBP7.1□□□□□ -1.27
ATP2C1-220ENST00000513636 ITIH2P19823 946 aa7.1□□□□□ -1.27
ATP2C1-220ENST00000513636 FBLN7Q53RD9 439 aa7.1□□□□□ -1.27
ATP2C1-220ENST00000513636 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.1□□□□□ -1.27
ATP2C1-220ENST00000513636 LRRN4CLQ8ND94 238 aa7.1□□□□□ -1.27
ATP2C1-220ENST00000513636 WDR89Q96FK6 387 aaPredicted RBP7.1□□□□□ -1.27
ATP2C1-220ENST00000513636 FAM84AQ96KN4 292 aa7.1□□□□□ -1.27
ATP2C1-220ENST00000513636 EGFL7Q9UHF1 273 aa7.1□□□□□ -1.27
ATP2C1-220ENST00000513636 GPN3Q9UHW5 284 aaPredicted RBP7.1□□□□□ -1.27
ATP2C1-220ENST00000513636 LRRC10BA6NIK2 292 aa7.09□□□□□ -1.27
ATP2C1-220ENST00000513636 H3BRB1 525 aa7.09□□□□□ -1.27
ATP2C1-220ENST00000513636 CD96P40200 585 aa7.09□□□□□ -1.27
ATP2C1-220ENST00000513636 ORC1Q13415 861 aa7.09□□□□□ -1.27
ATP2C1-220ENST00000513636 DTHD1Q6ZMT9 781 aa7.09□□□□□ -1.27
ATP2C1-220ENST00000513636 TUT1Q9H6E5 874 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms