RNA–Protein interactions for RNA: ENST00000513588.5

CTNND2-215, Transcript of catenin delta 2, humanhuman

TSL 1 (best)

Gene CTNND2, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-215ENST00000513588 PNOCQ13519 176 aa13.18□□□□□ -0.3
CTNND2-215ENST00000513588 NAA30Q147X3 362 aaPredicted RBP13.18□□□□□ -0.3
CTNND2-215ENST00000513588 AIFM3Q96NN9 605 aa13.18□□□□□ -0.3
CTNND2-215ENST00000513588 PALLDQ8WX93 1383 aa13.18□□□□□ -0.3
CTNND2-215ENST00000513588 OVOS2A0A0G2JMS6 1433 aa13.17□□□□□ -0.3
CTNND2-215ENST00000513588 CCDC66A2RUB6 948 aa13.17□□□□□ -0.3
CTNND2-215ENST00000513588 RANBP6O60518 1105 aaKnown RBP13.17□□□□□ -0.3
CTNND2-215ENST00000513588 GPS2Q13227 327 aa13.17□□□□□ -0.3
CTNND2-215ENST00000513588 BMS1Q14692 1282 aaKnown RBP13.17□□□□□ -0.3
CTNND2-215ENST00000513588 ARHGAP29Q52LW3 1261 aa13.17□□□□□ -0.3
CTNND2-215ENST00000513588 RBM43Q6ZSC3 357 aaKnown RBP13.17□□□□□ -0.3
CTNND2-215ENST00000513588 FBXO3Q9UK99 471 aa13.17□□□□□ -0.3
CTNND2-215ENST00000513588 MTMR7Q9Y216 660 aa13.17□□□□□ -0.3
CTNND2-215ENST00000513588 RGPD8O14715 1765 aaPredicted RBP13.17□□□□□ -0.3
CTNND2-215ENST00000513588 PCCAP05165 728 aaPredicted RBP13.17□□□□□ -0.3
CTNND2-215ENST00000513588 USP27XA6NNY8 438 aa13.17□□□□□ -0.3
CTNND2-215ENST00000513588 SLC39A14Q15043 492 aa13.17□□□□□ -0.3
CTNND2-215ENST00000513588 ZBTB38Q8NAP3 1195 aaPredicted RBP13.17□□□□□ -0.3
CTNND2-215ENST00000513588 TRERF1Q96PN7 1200 aa13.17□□□□□ -0.3
CTNND2-215ENST00000513588 XRN1Q8IZH2 1706 aaKnown RBP13.17□□□□□ -0.3
CTNND2-215ENST00000513588 TMEM94Q12767 1356 aa13.16□□□□□ -0.3
CTNND2-215ENST00000513588 DIS3L2Q8IYB7 885 aaKnown RBP13.16□□□□□ -0.3
CTNND2-215ENST00000513588 MIGA1Q8NAN2 632 aa13.16□□□□□ -0.3
CTNND2-215ENST00000513588 CLIC6Q96NY7 704 aa13.16□□□□□ -0.3
CTNND2-215ENST00000513588 ZMYM6O95789 1325 aa13.16□□□□□ -0.3
CTNND2-215ENST00000513588 CUTAO60888 179 aa13.16□□□□□ -0.3
CTNND2-215ENST00000513588 TUBB4AP04350 444 aa13.16□□□□□ -0.3
CTNND2-215ENST00000513588 AFMP43652 599 aa13.16□□□□□ -0.3
CTNND2-215ENST00000513588 CTDSPL2Q05D32 466 aa13.16□□□□□ -0.3
CTNND2-215ENST00000513588 GREM2Q9H772 168 aa13.16□□□□□ -0.3
CTNND2-215ENST00000513588 ARMT1Q9H993 441 aa13.16□□□□□ -0.3
CTNND2-215ENST00000513588 PDE6AP16499 860 aa13.16□□□□□ -0.3
CTNND2-215ENST00000513588 KANK3Q6NY19 840 aa13.16□□□□□ -0.3
CTNND2-215ENST00000513588 DHX40Q8IX18 779 aaKnown RBP13.16□□□□□ -0.3
CTNND2-215ENST00000513588 TOPAZ1Q8N9V7 1692 aa13.16□□□□□ -0.3
CTNND2-215ENST00000513588 NALCNQ8IZF0 1738 aa13.15□□□□□ -0.3
CTNND2-215ENST00000513588 SCARF1Q14162 830 aa13.15□□□□□ -0.3
CTNND2-215ENST00000513588 APOA5Q6Q788 366 aa13.15□□□□□ -0.3
CTNND2-215ENST00000513588 TICAM2Q86XR7 235 aa13.15□□□□□ -0.3
CTNND2-215ENST00000513588 DZIP3Q86Y13 1208 aaKnown RBP13.15□□□□□ -0.3
CTNND2-215ENST00000513588 TMTC2Q8N394 836 aa13.15□□□□□ -0.3
CTNND2-215ENST00000513588 GOLGA6L9A6NEM1 432 aa13.15□□□□□ -0.3
CTNND2-215ENST00000513588 IPO7O95373 1038 aaKnown RBP13.15□□□□□ -0.3
CTNND2-215ENST00000513588 IQCA1Q86XH1 822 aa13.15□□□□□ -0.3
CTNND2-215ENST00000513588 PCMTD1Q96MG8 357 aaPredicted RBP13.15□□□□□ -0.3
CTNND2-215ENST00000513588 KCNJ14Q9UNX9 436 aa13.15□□□□□ -0.3
CTNND2-215ENST00000513588 POLR2DO15514 142 aaKnown RBP13.15□□□□□ -0.3
CTNND2-215ENST00000513588 TXLNAP40222 546 aa13.15□□□□□ -0.3
CTNND2-215ENST00000513588 PUM3Q15397 648 aaKnown RBP13.15□□□□□ -0.3
CTNND2-215ENST00000513588 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.15□□□□□ -0.3
CTNND2-215ENST00000513588 CYP7A1P22680 504 aa13.14□□□□□ -0.31
CTNND2-215ENST00000513588 PHKA1P46020 1223 aa13.14□□□□□ -0.31
CTNND2-215ENST00000513588 DHX58Q96C10 678 aa13.14□□□□□ -0.31
CTNND2-215ENST00000513588 NWD1Q149M9 1564 aa13.14□□□□□ -0.31
CTNND2-215ENST00000513588 FDPSP14324 419 aaKnown RBP13.14□□□□□ -0.31
CTNND2-215ENST00000513588 CTSWP56202 376 aa13.14□□□□□ -0.31
CTNND2-215ENST00000513588 ERCC6LQ2NKX8 1250 aa13.14□□□□□ -0.31
CTNND2-215ENST00000513588 CERS3Q8IU89 383 aa13.14□□□□□ -0.31
CTNND2-215ENST00000513588 KDM6AO15550 1401 aaPredicted RBP13.14□□□□□ -0.31
CTNND2-215ENST00000513588 POLR3GO15318 223 aaPredicted RBP13.14□□□□□ -0.31
CTNND2-215ENST00000513588 RILPL1Q5EBL4 403 aa13.14□□□□□ -0.31
CTNND2-215ENST00000513588 CATIPQ7Z7H3 387 aa13.14□□□□□ -0.31
CTNND2-215ENST00000513588 MB21D2Q8IYB1 491 aaPredicted RBP13.14□□□□□ -0.31
CTNND2-215ENST00000513588 ENGASEQ8NFI3 743 aa13.14□□□□□ -0.31
CTNND2-215ENST00000513588 BAG1Q99933 345 aaPredicted RBP13.14□□□□□ -0.31
CTNND2-215ENST00000513588 ZSWIM4Q9H7M6 989 aa13.14□□□□□ -0.31
CTNND2-215ENST00000513588 FANCLQ9NW38 375 aa13.14□□□□□ -0.31
CTNND2-215ENST00000513588 ASAP1Q9ULH1 1129 aa13.14□□□□□ -0.31
CTNND2-215ENST00000513588 NFE2L3Q9Y4A8 694 aa13.14□□□□□ -0.31
CTNND2-215ENST00000513588 TRIM75PA6NK02 468 aa13.13□□□□□ -0.31
CTNND2-215ENST00000513588 PDE8AO60658 829 aa13.13□□□□□ -0.31
CTNND2-215ENST00000513588 ATP1A3P13637 1013 aa13.13□□□□□ -0.31
CTNND2-215ENST00000513588 ADD2P35612 726 aa13.13□□□□□ -0.31
CTNND2-215ENST00000513588 CCDC12Q8WUD4 166 aaPredicted RBP13.13□□□□□ -0.31
CTNND2-215ENST00000513588 LPIN2Q92539 896 aa13.13□□□□□ -0.31
CTNND2-215ENST00000513588 ESR2Q92731 530 aa13.13□□□□□ -0.31
CTNND2-215ENST00000513588 CABP5Q9NP86 173 aa13.13□□□□□ -0.31
CTNND2-215ENST00000513588 BTBD18B2RXH4 712 aa13.13□□□□□ -0.31
CTNND2-215ENST00000513588 EXOC5O00471 708 aa13.13□□□□□ -0.31
CTNND2-215ENST00000513588 STX17P56962 302 aa13.13□□□□□ -0.31
CTNND2-215ENST00000513588 SYCP1Q15431 976 aa13.13□□□□□ -0.31
CTNND2-215ENST00000513588 SYNE4Q8N205 404 aa13.13□□□□□ -0.31
CTNND2-215ENST00000513588 PPP1R13BQ96KQ4 1090 aa13.13□□□□□ -0.31
CTNND2-215ENST00000513588 PCDHA5Q9Y5H7 936 aa13.13□□□□□ -0.31
CTNND2-215ENST00000513588 WDR17Q8IZU2 1322 aa13.13□□□□□ -0.31
CTNND2-215ENST00000513588 COL15A1P39059 1388 aa13.13□□□□□ -0.31
CTNND2-215ENST00000513588 KIF5CO60282 957 aa13.13□□□□□ -0.31
CTNND2-215ENST00000513588 MCAMP43121 646 aa13.13□□□□□ -0.31
CTNND2-215ENST00000513588 DMTNQ08495 405 aa13.13□□□□□ -0.31
CTNND2-215ENST00000513588 UBE3CQ15386 1083 aa13.13□□□□□ -0.31
CTNND2-215ENST00000513588 GOLGA6L1Q8N7Z2 621 aa13.13□□□□□ -0.31
CTNND2-215ENST00000513588 SPATA5Q8NB90 893 aa13.13□□□□□ -0.31
CTNND2-215ENST00000513588 CTCFLQ8NI51 663 aaPredicted RBP13.13□□□□□ -0.31
CTNND2-215ENST00000513588 SRRTQ9BXP5 876 aaKnown RBP13.13□□□□□ -0.31
CTNND2-215ENST00000513588 PDE8BO95263 885 aa13.12□□□□□ -0.31
CTNND2-215ENST00000513588 TNNT3P45378 269 aaPredicted RBP13.12□□□□□ -0.31
CTNND2-215ENST00000513588 ETF1P62495 437 aaKnown RBP13.12□□□□□ -0.31
CTNND2-215ENST00000513588 PTPN21Q16825 1174 aa13.12□□□□□ -0.31
CTNND2-215ENST00000513588 NUTM2AQ8IVF1 878 aaPredicted RBP13.12□□□□□ -0.31
CTNND2-215ENST00000513588 NOSTRINQ8IVI9 506 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms