RNA–Protein interactions for RNA: ENST00000513514.2

DDR1-273, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 186 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-273ENST00000513514 STK3Q13188 491 aa9.38□□□□□ -0.91
DDR1-273ENST00000513514 SF3A1Q15459 793 aaKnown RBP9.38□□□□□ -0.91
DDR1-273ENST00000513514 TAF7LQ5H9L4 462 aa9.38□□□□□ -0.91
DDR1-273ENST00000513514 GIGYF2Q6Y7W6 1299 aaKnown RBP9.38□□□□□ -0.91
DDR1-273ENST00000513514 CCDC186Q7Z3E2 898 aa9.38□□□□□ -0.91
DDR1-273ENST00000513514 LUZP1Q86V48 1076 aa9.38□□□□□ -0.91
DDR1-273ENST00000513514 SGMS1Q86VZ5 419 aa9.38□□□□□ -0.91
DDR1-273ENST00000513514 CREBRFQ8IUR6 639 aa9.38□□□□□ -0.91
DDR1-273ENST00000513514 LRRC8AQ8IWT6 810 aa9.38□□□□□ -0.91
DDR1-273ENST00000513514 MB21D2Q8IYB1 491 aaPredicted RBP9.38□□□□□ -0.91
DDR1-273ENST00000513514 XAGE2Q96GT9 111 aa9.38□□□□□ -0.91
DDR1-273ENST00000513514 SDF4Q9BRK5 362 aa9.38□□□□□ -0.91
DDR1-273ENST00000513514 TMOD3Q9NYL9 352 aa9.38□□□□□ -0.91
DDR1-273ENST00000513514 ANGEL1Q9UNK9 670 aaKnown RBP9.38□□□□□ -0.91
DDR1-273ENST00000513514 IQSEC3Q9UPP2 1182 aaPredicted RBP9.38□□□□□ -0.91
DDR1-273ENST00000513514 CHMP3Q9Y3E7 222 aa9.38□□□□□ -0.91
DDR1-273ENST00000513514 MYH15Q9Y2K3 1946 aa9.38□□□□□ -0.91
DDR1-273ENST00000513514 MROH5Q6ZUA9 1318 aa9.37□□□□□ -0.91
DDR1-273ENST00000513514 TJP1Q07157 1748 aa9.37□□□□□ -0.91
DDR1-273ENST00000513514 KAT6BQ8WYB5 2073 aa9.37□□□□□ -0.91
DDR1-273ENST00000513514 ANKRD18BA2A2Z9 1011 aa9.37□□□□□ -0.91
DDR1-273ENST00000513514 SPTLC2O15270 562 aa9.37□□□□□ -0.91
DDR1-273ENST00000513514 FGAP02671 866 aa9.37□□□□□ -0.91
DDR1-273ENST00000513514 ARID4AP29374 1257 aaPredicted RBP9.37□□□□□ -0.91
DDR1-273ENST00000513514 TIMM10P62072 90 aa9.37□□□□□ -0.91
DDR1-273ENST00000513514 APOBRQ0VD83 1088 aa9.37□□□□□ -0.91
DDR1-273ENST00000513514 SLC39A14Q15043 492 aa9.37□□□□□ -0.91
DDR1-273ENST00000513514 STK38Q15208 465 aa9.37□□□□□ -0.91
DDR1-273ENST00000513514 CAMK4Q16566 473 aa9.37□□□□□ -0.91
DDR1-273ENST00000513514 KANK3Q6NY19 840 aa9.37□□□□□ -0.91
DDR1-273ENST00000513514 STOX1Q6ZVD7 989 aa9.37□□□□□ -0.91
DDR1-273ENST00000513514 FCHSD1Q86WN1 690 aa9.37□□□□□ -0.91
DDR1-273ENST00000513514 FSIP1Q8NA03 581 aa9.37□□□□□ -0.91
DDR1-273ENST00000513514 ANKRD7Q92527 254 aa9.37□□□□□ -0.91
DDR1-273ENST00000513514 KCNF1Q9H3M0 494 aa9.37□□□□□ -0.91
DDR1-273ENST00000513514 CGNQ9P2M7 1197 aaKnown RBP9.37□□□□□ -0.91
DDR1-273ENST00000513514 DACH1Q9UI36 760 aa9.37□□□□□ -0.91
DDR1-273ENST00000513514 RIPOR2Q9Y4F9 1068 aa9.37□□□□□ -0.91
DDR1-273ENST00000513514 RTL9Q8NET4 1388 aa9.37□□□□□ -0.91
DDR1-273ENST00000513514 GOLGA6L9A6NEM1 432 aa9.36□□□□□ -0.91
DDR1-273ENST00000513514 PRC1O43663 620 aa9.36□□□□□ -0.91
DDR1-273ENST00000513514 PDE8AO60658 829 aa9.36□□□□□ -0.91
DDR1-273ENST00000513514 BMP15O95972 392 aa9.36□□□□□ -0.91
DDR1-273ENST00000513514 SLC3A2P08195 630 aaKnown RBP9.36□□□□□ -0.91
DDR1-273ENST00000513514 ADD2P35612 726 aa9.36□□□□□ -0.91
DDR1-273ENST00000513514 NLRP12P59046 1061 aa9.36□□□□□ -0.91
DDR1-273ENST00000513514 TUBB4BP68371 445 aa9.36□□□□□ -0.91
DDR1-273ENST00000513514 SEMA3FQ13275 785 aa9.36□□□□□ -0.91
DDR1-273ENST00000513514 TRIM29Q14134 588 aa9.36□□□□□ -0.91
DDR1-273ENST00000513514 SART3Q15020 963 aaKnown RBP9.36□□□□□ -0.91
DDR1-273ENST00000513514 ATP2B3Q16720 1220 aa9.36□□□□□ -0.91
DDR1-273ENST00000513514 SLFNL1Q499Z3 407 aa9.36□□□□□ -0.91
DDR1-273ENST00000513514 UTP14CQ5TAP6 766 aaKnown RBP9.36□□□□□ -0.91
DDR1-273ENST00000513514 MYSM1Q5VVJ2 828 aa9.36□□□□□ -0.91
DDR1-273ENST00000513514 CKAP2LQ8IYA6 745 aa9.36□□□□□ -0.91
DDR1-273ENST00000513514 OSBP2Q969R2 916 aa9.36□□□□□ -0.91
DDR1-273ENST00000513514 USP28Q96RU2 1077 aa9.36□□□□□ -0.91
DDR1-273ENST00000513514 PYM1Q9BRP8 204 aaKnown RBP9.36□□□□□ -0.91
DDR1-273ENST00000513514 SRRTQ9BXP5 876 aaKnown RBP9.36□□□□□ -0.91
DDR1-273ENST00000513514 GTPBP4Q9BZE4 634 aaKnown RBP9.36□□□□□ -0.91
DDR1-273ENST00000513514 KRT23Q9C075 422 aa9.36□□□□□ -0.91
DDR1-273ENST00000513514 DNAJC25Q9H1X3 360 aa9.36□□□□□ -0.91
DDR1-273ENST00000513514 NMRK2Q9NPI5 230 aa9.36□□□□□ -0.91
DDR1-273ENST00000513514 ORC3Q9UBD5 711 aaPredicted RBP9.36□□□□□ -0.91
DDR1-273ENST00000513514 PCDHA7Q9UN72 937 aa9.36□□□□□ -0.91
DDR1-273ENST00000513514 CEP131Q9UPN4 1083 aa9.36□□□□□ -0.91
DDR1-273ENST00000513514 CD2APQ9Y5K6 639 aa9.36□□□□□ -0.91
DDR1-273ENST00000513514 AP5Z1O43299 807 aa9.35□□□□□ -0.91
DDR1-273ENST00000513514 CUTAO60888 179 aa9.35□□□□□ -0.91
DDR1-273ENST00000513514 TPM1P09493 284 aa9.35□□□□□ -0.91
DDR1-273ENST00000513514 PRKCSHP14314 528 aaPredicted RBP9.35□□□□□ -0.91
DDR1-273ENST00000513514 PTGS1P23219 599 aa9.35□□□□□ -0.91
DDR1-273ENST00000513514 U2AF2P26368 475 aaKnown RBP eCLIP9.35□□□□□ -0.91
DDR1-273ENST00000513514 FKBP4Q02790 459 aaKnown RBP eCLIP9.35□□□□□ -0.91
DDR1-273ENST00000513514 SAFBQ15424 915 aaKnown RBP eCLIP9.35□□□□□ -0.91
DDR1-273ENST00000513514 PTPN14Q15678 1187 aa9.35□□□□□ -0.91
DDR1-273ENST00000513514 WASHC4Q2M389 1173 aa9.35□□□□□ -0.91
DDR1-273ENST00000513514 ANO1Q5XXA6 986 aa9.35□□□□□ -0.91
DDR1-273ENST00000513514 CCDC129Q6ZRS4 1044 aa9.35□□□□□ -0.91
DDR1-273ENST00000513514 TTLL7Q6ZT98 887 aa9.35□□□□□ -0.91
DDR1-273ENST00000513514 FAM177A1Q8N128 213 aaPredicted RBP9.35□□□□□ -0.91
DDR1-273ENST00000513514 TRIML1Q8N9V2 468 aa9.35□□□□□ -0.91
DDR1-273ENST00000513514 ZNF579Q8NAF0 562 aaKnown RBP9.35□□□□□ -0.91
DDR1-273ENST00000513514 KIF18AQ8NI77 898 aa9.35□□□□□ -0.91
DDR1-273ENST00000513514 LPIN2Q92539 896 aa9.35□□□□□ -0.91
DDR1-273ENST00000513514 EDC3Q96F86 508 aaKnown RBP9.35□□□□□ -0.91
DDR1-273ENST00000513514 DDX11Q96FC9 970 aa9.35□□□□□ -0.91
DDR1-273ENST00000513514 SEC62Q99442 399 aaKnown RBP9.35□□□□□ -0.91
DDR1-273ENST00000513514 NACAP1Q9BZK3 213 aa9.35□□□□□ -0.91
DDR1-273ENST00000513514 RNF41Q9H4P4 317 aaPredicted RBP9.35□□□□□ -0.91
DDR1-273ENST00000513514 TUBE1Q9UJT0 475 aa9.35□□□□□ -0.91
DDR1-273ENST00000513514 TAF6LQ9Y6J9 622 aa9.35□□□□□ -0.91
DDR1-273ENST00000513514 LAMA4Q16363 1823 aa9.35□□□□□ -0.91
DDR1-273ENST00000513514 KIAA1551Q9HCM1 1747 aa9.34□□□□□ -0.91
DDR1-273ENST00000513514 KLF18A0A0U1RQI7 1052 aa9.34□□□□□ -0.91
DDR1-273ENST00000513514 PATL2C9JE40 543 aaKnown RBP9.34□□□□□ -0.91
DDR1-273ENST00000513514 GPAA1O43292 621 aa9.34□□□□□ -0.91
DDR1-273ENST00000513514 PDE8BO95263 885 aa9.34□□□□□ -0.91
DDR1-273ENST00000513514 A1BGP04217 495 aa9.34□□□□□ -0.91
DDR1-273ENST00000513514 TNNT1P13805 278 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 193.3 ms