RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 STX1AQ16623 288 aa4.8□□□□□ -1.64
VCAN-209ENST00000513016 EXOC8Q8IYI6 725 aa4.8□□□□□ -1.64
VCAN-209ENST00000513016 BBXQ8WY36 941 aaPredicted RBP4.8□□□□□ -1.64
VCAN-209ENST00000513016 XDHP47989 1333 aa4.8□□□□□ -1.64
VCAN-209ENST00000513016 IBTKQ9P2D0 1353 aaPredicted RBP4.8□□□□□ -1.64
VCAN-209ENST00000513016 XPOTO43592 962 aaKnown RBP4.8□□□□□ -1.64
VCAN-209ENST00000513016 MFSD14BQ5SR56 506 aa4.8□□□□□ -1.64
VCAN-209ENST00000513016 USPL1Q5W0Q7 1092 aa4.8□□□□□ -1.64
VCAN-209ENST00000513016 OTUD6BQ8N6M0 293 aa4.8□□□□□ -1.64
VCAN-209ENST00000513016 RNF34Q969K3 372 aa4.8□□□□□ -1.64
VCAN-209ENST00000513016 XAGE2Q96GT9 111 aa4.8□□□□□ -1.64
VCAN-209ENST00000513016 LTKP29376 864 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 PDE1AP54750 535 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 SV2BQ7L1I2 683 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 DHX32Q7L7V1 743 aaKnown RBP4.79□□□□□ -1.64
VCAN-209ENST00000513016 ZBTB8OSQ8IWT0 167 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 DYDC1Q8WWB3 177 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 SELENOOQ9BVL4 669 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 TCOF1Q13428 1488 aaKnown RBP4.79□□□□□ -1.64
VCAN-209ENST00000513016 CCDC169A6NNP5 214 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 KIAA0754O94854 1291 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 ADCY7P51828 1080 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 CTSWP56202 376 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 PDE4DQ08499 809 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 FAM160B1Q5W0V3 765 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 LEKR1Q6ZMV7 388 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 ZNF526Q8TF50 670 aaPredicted RBP4.79□□□□□ -1.64
VCAN-209ENST00000513016 PPM1EQ8WY54 764 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 ADPGKQ9BRR6 497 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 NRBP2Q9NSY0 501 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 ADD3Q9UEY8 706 aaKnown RBP4.79□□□□□ -1.64
VCAN-209ENST00000513016 LRFN2Q9ULH4 789 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 JCADQ9P266 1359 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 ATP2A1O14983 1001 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 SDSP20132 328 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 TCP10Q12799 353 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 SLC27A3Q5K4L6 730 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 NCAPG2Q86XI2 1143 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 ANKRD35Q8N283 1001 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.79□□□□□ -1.64
VCAN-209ENST00000513016 SPATA31A6Q5VVP1 1343 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 KDM2BQ8NHM5 1336 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 NDC80O14777 642 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 N4BP3O15049 544 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 PCCAP05165 728 aaPredicted RBP4.79□□□□□ -1.64
VCAN-209ENST00000513016 FBLN1P23142 703 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 IFFO1Q0D2I5 559 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 NMIQ13287 307 aaPredicted RBP4.79□□□□□ -1.64
VCAN-209ENST00000513016 UBE4AQ14139 1066 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 Q6ZUG5 572 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 BRAPQ7Z569 592 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 ABI1Q8IZP0 508 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 GLG1Q92896 1179 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 CENPHQ9H3R5 247 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 ATP8A2Q9NTI2 1148 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 PA2G4Q9UQ80 394 aaKnown RBP4.79□□□□□ -1.64
VCAN-209ENST00000513016 JAG2Q9Y219 1238 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 AKR1B10O60218 316 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 EPB41P11171 864 aaKnown RBP4.79□□□□□ -1.64
VCAN-209ENST00000513016 ATF7P17544 494 aaPredicted RBP4.79□□□□□ -1.64
VCAN-209ENST00000513016 ADRA2BP18089 450 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 KIAA0753Q2KHM9 967 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 ZBTB38Q8NAP3 1195 aaPredicted RBP4.79□□□□□ -1.64
VCAN-209ENST00000513016 SPATA5Q8NB90 893 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 CNPY2Q9Y2B0 182 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 MAP3K15Q6ZN16 1313 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 DEXIO95424 95 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 CCT6AP40227 531 aaKnown RBP4.79□□□□□ -1.64
VCAN-209ENST00000513016 BIRC3Q13489 604 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 TNNI3KQ59H18 835 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 ARHGEF16Q5VV41 709 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 CCDC125Q86Z20 511 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 DDX17Q92841 729 aaKnown RBP4.79□□□□□ -1.64
VCAN-209ENST00000513016 MASTLQ96GX5 879 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 PSMD1Q99460 953 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 SWAP70Q9UH65 585 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 FPGT-TNNI3KV9GXZ4 949 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 TCP10L2B9ZVM9 353 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 VAMP4O75379 141 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 MARCKSP29966 332 aaPredicted RBP4.79□□□□□ -1.64
VCAN-209ENST00000513016 IL13P35225 146 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 CERKLQ49MI3 558 aaPredicted RBP4.79□□□□□ -1.64
VCAN-209ENST00000513016 ATL3Q6DD88 541 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 DPH6Q7L8W6 267 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 IQUBQ8NA54 791 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 CRACR2AQ9BSW2 395 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 INCENPQ9NQS7 918 aa4.79□□□□□ -1.64
VCAN-209ENST00000513016 MYO3BQ8WXR4 1341 aa4.78□□□□□ -1.64
VCAN-209ENST00000513016 CALUO43852 315 aaPredicted RBP4.78□□□□□ -1.64
VCAN-209ENST00000513016 KRT26Q7Z3Y9 468 aa4.78□□□□□ -1.64
VCAN-209ENST00000513016 FAM177A1Q8N128 213 aaPredicted RBP4.78□□□□□ -1.64
VCAN-209ENST00000513016 RETREG2Q8NC44 543 aa4.78□□□□□ -1.64
VCAN-209ENST00000513016 RIOK1Q9BRS2 568 aaKnown RBP4.78□□□□□ -1.64
VCAN-209ENST00000513016 ESYT1Q9BSJ8 1104 aa4.78□□□□□ -1.64
VCAN-209ENST00000513016 TMEM106CQ9BVX2 250 aa4.78□□□□□ -1.64
VCAN-209ENST00000513016 MTIF3Q9H2K0 278 aaKnown RBP4.78□□□□□ -1.64
VCAN-209ENST00000513016 PCP11498 1178 aaKnown RBP4.78□□□□□ -1.64
VCAN-209ENST00000513016 MAP2K1Q02750 393 aaPredicted RBP4.78□□□□□ -1.64
VCAN-209ENST00000513016 CCDC77Q9BR77 488 aa4.78□□□□□ -1.64
VCAN-209ENST00000513016 AATFQ9NY61 560 aaKnown RBP eCLIP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms