RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 ACAD11Q709F0 780 aa6.48□□□□□ -1.37
HTT-210ENST00000512909 FBXO11Q86XK2 927 aa6.48□□□□□ -1.37
HTT-210ENST00000512909 PHC3Q8NDX5 983 aa6.48□□□□□ -1.37
HTT-210ENST00000512909 ZNF296Q8WUU4 475 aaPredicted RBP6.48□□□□□ -1.37
HTT-210ENST00000512909 NKD1Q969G9 470 aa6.48□□□□□ -1.37
HTT-210ENST00000512909 GPRASP2Q96D09 838 aa6.48□□□□□ -1.37
HTT-210ENST00000512909 RUSC1Q9BVN2 902 aa6.48□□□□□ -1.37
HTT-210ENST00000512909 PCDHA4Q9UN74 947 aa6.48□□□□□ -1.37
HTT-210ENST00000512909 SART1O43290 800 aaKnown RBP6.47□□□□□ -1.37
HTT-210ENST00000512909 TRIM37O94972 964 aa6.47□□□□□ -1.37
HTT-210ENST00000512909 SSBP05455 408 aaKnown RBP eCLIP6.47□□□□□ -1.37
HTT-210ENST00000512909 PAK2Q13177 524 aa6.47□□□□□ -1.37
HTT-210ENST00000512909 NUTM2GQ5VZR2 741 aa6.47□□□□□ -1.37
HTT-210ENST00000512909 FDX2Q6P4F2 183 aa6.47□□□□□ -1.37
HTT-210ENST00000512909 FMR1NBQ8N0W7 255 aaPredicted RBP6.47□□□□□ -1.37
HTT-210ENST00000512909 TANGO6Q9C0B7 1094 aa6.47□□□□□ -1.37
HTT-210ENST00000512909 MRPL18Q9H0U6 180 aaKnown RBP6.47□□□□□ -1.37
HTT-210ENST00000512909 CYP4F12Q9HCS2 524 aa6.47□□□□□ -1.37
HTT-210ENST00000512909 KRT82Q9NSB4 513 aa6.47□□□□□ -1.37
HTT-210ENST00000512909 ELNP15502 786 aa6.46□□□□□ -1.38
HTT-210ENST00000512909 ATP2B1P20020 1258 aa6.46□□□□□ -1.38
HTT-210ENST00000512909 BMP6P22004 513 aa6.46□□□□□ -1.38
HTT-210ENST00000512909 SEPT6Q14141 434 aa6.46□□□□□ -1.38
HTT-210ENST00000512909 FBXW10Q5XX13 1052 aa6.46□□□□□ -1.38
HTT-210ENST00000512909 HGSNATQ68CP4 663 aa6.46□□□□□ -1.38
HTT-210ENST00000512909 SCARA3Q6AZY7 606 aa6.46□□□□□ -1.38
HTT-210ENST00000512909 HDXQ7Z353 690 aa6.46□□□□□ -1.38
HTT-210ENST00000512909 CCDC84Q86UT8 332 aaPredicted RBP6.46□□□□□ -1.38
HTT-210ENST00000512909 TRIM42Q8IWZ5 723 aa6.46□□□□□ -1.38
HTT-210ENST00000512909 CRBNQ96SW2 442 aa6.46□□□□□ -1.38
HTT-210ENST00000512909 CECR2Q9BXF3 1484 aa6.46□□□□□ -1.38
HTT-210ENST00000512909 ROBO2Q9HCK4 1378 aa6.45□□□□□ -1.38
HTT-210ENST00000512909 FAM229AH3BQW9 127 aa6.45□□□□□ -1.38
HTT-210ENST00000512909 RNF225M0QZC1 329 aaPredicted RBP6.45□□□□□ -1.38
HTT-210ENST00000512909 TLR3O15455 904 aaKnown RBP6.45□□□□□ -1.38
HTT-210ENST00000512909 DDX3YO15523 660 aaKnown RBP6.45□□□□□ -1.38
HTT-210ENST00000512909 ARHGEF15O94989 841 aa6.45□□□□□ -1.38
HTT-210ENST00000512909 LIG1P18858 919 aa6.45□□□□□ -1.38
HTT-210ENST00000512909 TFE3P19532 575 aaPredicted RBP6.45□□□□□ -1.38
HTT-210ENST00000512909 SNRPNP63162 240 aaKnown RBP6.45□□□□□ -1.38
HTT-210ENST00000512909 RACK1P63244 317 aaKnown RBP6.45□□□□□ -1.38
HTT-210ENST00000512909 AKAP4Q5JQC9 854 aa6.45□□□□□ -1.38
HTT-210ENST00000512909 EXOSC6Q5RKV6 272 aaKnown RBP6.45□□□□□ -1.38
HTT-210ENST00000512909 IGF2-ASQ6U949 168 aa6.45□□□□□ -1.38
HTT-210ENST00000512909 ADAMTSL4Q6UY14 1074 aa6.45□□□□□ -1.38
HTT-210ENST00000512909 GRIN3AQ8TCU5 1115 aa6.45□□□□□ -1.38
HTT-210ENST00000512909 SREK1Q8WXA9 508 aaKnown RBP6.45□□□□□ -1.38
HTT-210ENST00000512909 DRC1Q96MC2 740 aa6.45□□□□□ -1.38
HTT-210ENST00000512909 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.45□□□□□ -1.388e-13■■■□□ 16.5
HTT-210ENST00000512909 RNF208Q9H0X6 261 aa6.45□□□□□ -1.38
HTT-210ENST00000512909 SSU72Q9NP77 194 aaKnown RBP6.45□□□□□ -1.38
HTT-210ENST00000512909 ADAMTS8Q9UP79 889 aa6.45□□□□□ -1.38
HTT-210ENST00000512909 R3HCC1Q9Y3T6 440 aaKnown RBP6.45□□□□□ -1.38
HTT-210ENST00000512909 PCDHB5Q9Y5E4 795 aa6.45□□□□□ -1.38
HTT-210ENST00000512909 GAS2O43903 313 aaKnown RBP6.44□□□□□ -1.38
HTT-210ENST00000512909 SPATA31C1P0DKV0 1188 aa6.44□□□□□ -1.38
HTT-210ENST00000512909 TNNI2P48788 182 aa6.44□□□□□ -1.38
HTT-210ENST00000512909 ZNF165P49910 485 aa6.44□□□□□ -1.38
HTT-210ENST00000512909 CHMP4BP1P59074 171 aa6.44□□□□□ -1.38
HTT-210ENST00000512909 RAD51AP2Q09MP3 1159 aa6.44□□□□□ -1.38
HTT-210ENST00000512909 SEZ6Q53EL9 994 aa6.44□□□□□ -1.38
HTT-210ENST00000512909 C12orf50Q8NA57 414 aaPredicted RBP6.44□□□□□ -1.38
HTT-210ENST00000512909 GALNT11Q8NCW6 608 aa6.44□□□□□ -1.38
HTT-210ENST00000512909 GPBAR1Q8TDU6 330 aa6.44□□□□□ -1.38
HTT-210ENST00000512909 GATAD2BQ8WXI9 593 aa6.44□□□□□ -1.38
HTT-210ENST00000512909 TRIM11Q96F44 468 aa6.44□□□□□ -1.38
HTT-210ENST00000512909 FERD3LQ96RJ6 166 aa6.44□□□□□ -1.38
HTT-210ENST00000512909 NT5C1AQ9BXI3 368 aa6.44□□□□□ -1.38
HTT-210ENST00000512909 PIDD1Q9HB75 910 aa6.44□□□□□ -1.38
HTT-210ENST00000512909 AP4E1Q9UPM8 1137 aa6.44□□□□□ -1.38
HTT-210ENST00000512909 CNTNAP5Q8WYK1 1306 aa6.44□□□□□ -1.38
HTT-210ENST00000512909 LOC100289279A0A1B0GTE1 492 aa6.43□□□□□ -1.38
HTT-210ENST00000512909 C9orf172C9J069 976 aa6.43□□□□□ -1.38
HTT-210ENST00000512909 NRG1Q02297 640 aaPredicted RBP6.43□□□□□ -1.38
HTT-210ENST00000512909 PDE4BQ07343 736 aa6.43□□□□□ -1.38
HTT-210ENST00000512909 COL9A2Q14055 689 aaPredicted RBP6.43□□□□□ -1.38
HTT-210ENST00000512909 MPP2Q14168 576 aa6.43□□□□□ -1.38
HTT-210ENST00000512909 FOXD4L6Q3SYB3 417 aaPredicted RBP6.43□□□□□ -1.38
HTT-210ENST00000512909 FBXL19Q6PCT2 694 aa6.43□□□□□ -1.38
HTT-210ENST00000512909 FOXD4L3Q6VB84 417 aaPredicted RBP6.43□□□□□ -1.38
HTT-210ENST00000512909 BNC2Q6ZN30 1099 aaPredicted RBP6.43□□□□□ -1.38
HTT-210ENST00000512909 FAM196AQ6ZSG2 479 aa6.43□□□□□ -1.38
HTT-210ENST00000512909 CDC37L1Q7L3B6 337 aa6.43□□□□□ -1.38
HTT-210ENST00000512909 SLC43A3Q8NBI5 491 aa6.43□□□□□ -1.38
HTT-210ENST00000512909 UBASH3BQ8TF42 649 aa6.43□□□□□ -1.38
HTT-210ENST00000512909 RHOVQ96L33 236 aa6.43□□□□□ -1.38
HTT-210ENST00000512909 YIPF2Q9BWQ6 316 aa6.43□□□□□ -1.38
HTT-210ENST00000512909 CEP41Q9BYV8 373 aa6.43□□□□□ -1.38
HTT-210ENST00000512909 CCDC86Q9H6F5 360 aaKnown RBP6.43□□□□□ -1.38
HTT-210ENST00000512909 ADAMTS1Q9UHI8 967 aa6.43□□□□□ -1.38
HTT-210ENST00000512909 DEAF1O75398 565 aaPredicted RBP6.42□□□□□ -1.38
HTT-210ENST00000512909 F13A1P00488 732 aa6.42□□□□□ -1.38
HTT-210ENST00000512909 GLB1P16278 677 aa6.42□□□□□ -1.38
HTT-210ENST00000512909 USP11P51784 963 aa6.42□□□□□ -1.38
HTT-210ENST00000512909 RPL6Q02878 288 aaKnown RBP6.42□□□□□ -1.38
HTT-210ENST00000512909 WIPI1Q5MNZ9 446 aaPredicted RBP6.42□□□□□ -1.38
HTT-210ENST00000512909 LINC00114Q6XXX2 140 aa6.42□□□□□ -1.38
HTT-210ENST00000512909 DYMQ7RTS9 669 aa6.42□□□□□ -1.38
HTT-210ENST00000512909 ALYREFQ86V81 257 aaKnown RBP6.42□□□□□ -1.38
HTT-210ENST00000512909 STK35Q8TDR2 534 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms