RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 FZD5Q13467 585 aa4.55□□□□□ -1.68
PDGFC-208ENST00000512711 PRPF40BQ6NWY9 871 aaKnown RBP4.55□□□□□ -1.68
PDGFC-208ENST00000512711 INTS5Q6P9B9 1019 aaKnown RBP4.55□□□□□ -1.68
PDGFC-208ENST00000512711 PAOXQ6QHF9 649 aa4.55□□□□□ -1.68
PDGFC-208ENST00000512711 MPRIPQ6WCQ1 1025 aa4.55□□□□□ -1.68
PDGFC-208ENST00000512711 NFXL1Q6ZNB6 911 aa4.55□□□□□ -1.68
PDGFC-208ENST00000512711 DMRTB1Q96MA1 342 aa4.55□□□□□ -1.68
PDGFC-208ENST00000512711 TBC1D32Q96NH3 1257 aa4.55□□□□□ -1.68
PDGFC-208ENST00000512711 CORO1BQ9BR76 489 aa4.55□□□□□ -1.68
PDGFC-208ENST00000512711 BCO2Q9BYV7 579 aa4.55□□□□□ -1.68
PDGFC-208ENST00000512711 GSX1Q9H4S2 264 aaPredicted RBP4.55□□□□□ -1.68
PDGFC-208ENST00000512711 ACSS3Q9H6R3 686 aa4.55□□□□□ -1.68
PDGFC-208ENST00000512711 C1GALT1Q9NS00 363 aa4.55□□□□□ -1.68
PDGFC-208ENST00000512711 PIM2Q9P1W9 311 aa4.55□□□□□ -1.68
PDGFC-208ENST00000512711 WWC3Q9ULE0 1092 aa4.55□□□□□ -1.68
PDGFC-208ENST00000512711 RNF114Q9Y508 228 aa4.55□□□□□ -1.68
PDGFC-208ENST00000512711 TREHO43280 583 aa4.54□□□□□ -1.68
PDGFC-208ENST00000512711 MAPK1P28482 360 aa4.54□□□□□ -1.68
PDGFC-208ENST00000512711 PDE4CQ08493 712 aa4.54□□□□□ -1.68
PDGFC-208ENST00000512711 PDE3AQ14432 1141 aa4.54□□□□□ -1.68
PDGFC-208ENST00000512711 SEZ6L2Q6UXD5 910 aa4.54□□□□□ -1.68
PDGFC-208ENST00000512711 DTHD1Q6ZMT9 781 aa4.54□□□□□ -1.68
PDGFC-208ENST00000512711 ERICH6Q7L0X2 663 aa4.54□□□□□ -1.68
PDGFC-208ENST00000512711 ZAR1Q86SH2 424 aa4.54□□□□□ -1.68
PDGFC-208ENST00000512711 PDZD3Q86UT5 571 aa4.54□□□□□ -1.68
PDGFC-208ENST00000512711 ATG3Q9NT62 314 aa4.54□□□□□ -1.68
PDGFC-208ENST00000512711 DCTN4Q9UJW0 460 aa4.54□□□□□ -1.68
PDGFC-208ENST00000512711 AP4E1Q9UPM8 1137 aa4.54□□□□□ -1.68
PDGFC-208ENST00000512711 LEMD3Q9Y2U8 911 aa4.54□□□□□ -1.68
PDGFC-208ENST00000512711 PNMA6FA0A0J9YX94 578 aa4.53□□□□□ -1.68
PDGFC-208ENST00000512711 WNT11O96014 354 aa4.53□□□□□ -1.68
PDGFC-208ENST00000512711 FOSL1P15407 271 aa4.53□□□□□ -1.68
PDGFC-208ENST00000512711 GRIK1P39086 918 aa4.53□□□□□ -1.68
PDGFC-208ENST00000512711 COL19A1Q14993 1142 aa4.53□□□□□ -1.68
PDGFC-208ENST00000512711 ENOX2Q16206 610 aaKnown RBP4.53□□□□□ -1.68
PDGFC-208ENST00000512711 RPS26P11Q5JNZ5 115 aaPredicted RBP4.53□□□□□ -1.68
PDGFC-208ENST00000512711 ZNF765Q7L2R6 523 aa4.53□□□□□ -1.68
PDGFC-208ENST00000512711 OSBPL1AQ9BXW6 950 aa4.53□□□□□ -1.68
PDGFC-208ENST00000512711 DISC1Q9NRI5 854 aa4.53□□□□□ -1.68
PDGFC-208ENST00000512711 NLRP2Q9NX02 1062 aa4.53□□□□□ -1.68
PDGFC-208ENST00000512711 AKAP2Q9Y2D5 859 aa4.53□□□□□ -1.68
PDGFC-208ENST00000512711 TMPRSS2O15393 492 aa4.52□□□□□ -1.69
PDGFC-208ENST00000512711 CYP26A1O43174 497 aa4.52□□□□□ -1.69
PDGFC-208ENST00000512711 AP3B2Q13367 1082 aa4.52□□□□□ -1.69
PDGFC-208ENST00000512711 MSMPQ1L6U9 139 aa4.52□□□□□ -1.69
PDGFC-208ENST00000512711 C3orf58Q8NDZ4 430 aa4.52□□□□□ -1.69
PDGFC-208ENST00000512711 GRIN3AQ8TCU5 1115 aa4.52□□□□□ -1.69
PDGFC-208ENST00000512711 DDX54Q8TDD1 881 aaKnown RBP4.52□□□□□ -1.69
PDGFC-208ENST00000512711 OSBPL7Q9BZF2 842 aa4.52□□□□□ -1.69
PDGFC-208ENST00000512711 TMEM39AQ9NV64 488 aa4.52□□□□□ -1.69
PDGFC-208ENST00000512711 CRIM1Q9NZV1 1036 aa4.52□□□□□ -1.69
PDGFC-208ENST00000512711 TRAK1Q9UPV9 953 aa4.52□□□□□ -1.69
PDGFC-208ENST00000512711 DAGLAQ9Y4D2 1042 aa4.52□□□□□ -1.69
PDGFC-208ENST00000512711 PCDHGC5Q9Y5F6 944 aa4.52□□□□□ -1.69
PDGFC-208ENST00000512711 IVNS1ABPQ9Y6Y0 642 aa4.52□□□□□ -1.69
PDGFC-208ENST00000512711 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.51□□□□□ -1.69
PDGFC-208ENST00000512711 RBAK-RBAKDNI3L0D1 243 aa4.51□□□□□ -1.69
PDGFC-208ENST00000512711 EIF4EBP3O60516 100 aaPredicted RBP4.51□□□□□ -1.69
PDGFC-208ENST00000512711 PAGE1O75459 146 aa4.51□□□□□ -1.69
PDGFC-208ENST00000512711 GSTP1P09211 210 aaKnown RBP4.51□□□□□ -1.69
PDGFC-208ENST00000512711 RASIP1Q5U651 963 aa4.51□□□□□ -1.69
PDGFC-208ENST00000512711 KCNB2Q92953 911 aa4.51□□□□□ -1.69
PDGFC-208ENST00000512711 FANCD2OSQ96PS1 177 aa4.51□□□□□ -1.69
PDGFC-208ENST00000512711 LRRC4CQ9HCJ2 640 aa4.51□□□□□ -1.69
PDGFC-208ENST00000512711 PPP4R2Q9NY27 417 aa4.51□□□□□ -1.69
PDGFC-208ENST00000512711 CCDC39Q9UFE4 941 aa4.51□□□□□ -1.69
PDGFC-208ENST00000512711 ZC3H7BQ9UGR2 993 aaKnown RBP4.51□□□□□ -1.69
PDGFC-208ENST00000512711 GPN3Q9UHW5 284 aaPredicted RBP4.51□□□□□ -1.69
PDGFC-208ENST00000512711 ARID1BQ8NFD5 2236 aaPredicted RBP4.5□□□□□ -1.69
PDGFC-208ENST00000512711 FBXO24O75426 580 aa4.5□□□□□ -1.69
PDGFC-208ENST00000512711 BMP6P22004 513 aa4.5□□□□□ -1.69
PDGFC-208ENST00000512711 ARNTP27540 789 aa4.5□□□□□ -1.69
PDGFC-208ENST00000512711 MAPK8P45983 427 aa4.5□□□□□ -1.69
PDGFC-208ENST00000512711 CDK5R2Q13319 367 aa4.5□□□□□ -1.69
PDGFC-208ENST00000512711 MAP7Q14244 749 aa4.5□□□□□ -1.69
PDGFC-208ENST00000512711 KIF4BQ2VIQ3 1234 aa4.5□□□□□ -1.69
PDGFC-208ENST00000512711 OGFOD3Q6PK18 319 aa4.5□□□□□ -1.69
PDGFC-208ENST00000512711 ABI1Q8IZP0 508 aa4.5□□□□□ -1.69
PDGFC-208ENST00000512711 ZFYVE1Q9HBF4 777 aa4.5□□□□□ -1.69
PDGFC-208ENST00000512711 RNF19AQ9NV58 838 aa4.5□□□□□ -1.69
PDGFC-208ENST00000512711 ADGRE2Q9UHX3 823 aa4.5□□□□□ -1.69
PDGFC-208ENST00000512711 U3KQE9 123 aa4.5□□□□□ -1.69
PDGFC-208ENST00000512711 SYNGAP1Q96PV0 1343 aa4.49□□□□□ -1.69
PDGFC-208ENST00000512711 ENC1O14682 589 aa4.49□□□□□ -1.69
PDGFC-208ENST00000512711 LEFTY1O75610 366 aa4.49□□□□□ -1.69
PDGFC-208ENST00000512711 SLFN14P0C7P3 912 aa4.49□□□□□ -1.69
PDGFC-208ENST00000512711 HCLS1P14317 486 aaPredicted RBP4.49□□□□□ -1.69
PDGFC-208ENST00000512711 ID3Q02535 119 aa4.49□□□□□ -1.69
PDGFC-208ENST00000512711 TTLL4Q14679 1199 aa4.49□□□□□ -1.69
PDGFC-208ENST00000512711 DUSP27Q5VZP5 1158 aa4.49□□□□□ -1.69
PDGFC-208ENST00000512711 MAP1SQ66K74 1059 aaPredicted RBP4.49□□□□□ -1.69
PDGFC-208ENST00000512711 SULF2Q8IWU5 870 aa4.49□□□□□ -1.69
PDGFC-208ENST00000512711 GIMAP7Q8NHV1 300 aa4.49□□□□□ -1.69
PDGFC-208ENST00000512711 NECAB3Q96P71 396 aaPredicted RBP4.49□□□□□ -1.69
PDGFC-208ENST00000512711 YIPF2Q9BWQ6 316 aa4.49□□□□□ -1.69
PDGFC-208ENST00000512711 CSADQ9Y600 493 aa4.49□□□□□ -1.69
PDGFC-208ENST00000512711 RNGTTO60942 597 aaKnown RBP4.48□□□□□ -1.69
PDGFC-208ENST00000512711 NEFMP07197 916 aa4.48□□□□□ -1.69
PDGFC-208ENST00000512711 PPP2R3AQ06190 1150 aa4.48□□□□□ -1.69
PDGFC-208ENST00000512711 FMR1Q06787 632 aaKnown RBP eCLIP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms