RNA–Protein interactions for RNA: ENST00000512665.5

NEDD9-213, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-213ENST00000512665 DCAF15Q66K64 600 aa12.72□□□□□ -0.37
NEDD9-213ENST00000512665 GPAT2Q6NUI2 795 aa12.72□□□□□ -0.37
NEDD9-213ENST00000512665 RIC3Q7Z5B4 369 aa12.72□□□□□ -0.37
NEDD9-213ENST00000512665 DZIP1LQ8IYY4 767 aaKnown RBP12.72□□□□□ -0.37
NEDD9-213ENST00000512665 LBHD1Q9BQE6 289 aaPredicted RBP12.72□□□□□ -0.37
NEDD9-213ENST00000512665 HCN4Q9Y3Q4 1203 aa12.72□□□□□ -0.37
NEDD9-213ENST00000512665 CYP2C8P10632 490 aa12.71□□□□□ -0.37
NEDD9-213ENST00000512665 KCNJ4P48050 445 aa12.71□□□□□ -0.37
NEDD9-213ENST00000512665 FKBP1CQ5VVH2 108 aa12.71□□□□□ -0.37
NEDD9-213ENST00000512665 ZNF804AQ7Z570 1209 aa12.71□□□□□ -0.37
NEDD9-213ENST00000512665 FAM83AQ86UY5 434 aa12.71□□□□□ -0.37
NEDD9-213ENST00000512665 COA7Q96BR5 231 aa12.71□□□□□ -0.37
NEDD9-213ENST00000512665 PNNQ9H307 717 aaKnown RBP12.71□□□□□ -0.37
NEDD9-213ENST00000512665 LTBP2Q14767 1821 aa12.71□□□□□ -0.38
NEDD9-213ENST00000512665 CXCL11O14625 94 aa12.7□□□□□ -0.38
NEDD9-213ENST00000512665 LRRC26Q2I0M4 334 aa12.7□□□□□ -0.38
NEDD9-213ENST00000512665 USP38Q8NB14 1042 aa12.7□□□□□ -0.38
NEDD9-213ENST00000512665 ADAMTS19Q8TE59 1207 aa12.7□□□□□ -0.38
NEDD9-213ENST00000512665 MYD88Q99836 296 aa12.7□□□□□ -0.38
NEDD9-213ENST00000512665 MAPK8IP3Q9UPT6 1336 aa12.69□□□□□ -0.38
NEDD9-213ENST00000512665 CHL1O00533 1208 aa12.69□□□□□ -0.38
NEDD9-213ENST00000512665 LMOD3Q0VAK6 560 aa12.69□□□□□ -0.38
NEDD9-213ENST00000512665 KRT24Q2M2I5 525 aa12.69□□□□□ -0.38
NEDD9-213ENST00000512665 NOL9Q5SY16 702 aaKnown RBP12.69□□□□□ -0.38
NEDD9-213ENST00000512665 MAP3K21Q5TCX8 1036 aa12.69□□□□□ -0.38
NEDD9-213ENST00000512665 ASB2Q96Q27 587 aa12.69□□□□□ -0.38
NEDD9-213ENST00000512665 ZNF341Q9BYN7 854 aa12.69□□□□□ -0.38
NEDD9-213ENST00000512665 ZNF112Q9UJU3 913 aa12.69□□□□□ -0.38
NEDD9-213ENST00000512665 TTF2Q9UNY4 1162 aaKnown RBP12.69□□□□□ -0.38
NEDD9-213ENST00000512665 A0A1B0GUL6 1792 aa12.69□□□□□ -0.38
NEDD9-213ENST00000512665 CLSPNQ9HAW4 1339 aa12.68□□□□□ -0.38
NEDD9-213ENST00000512665 HDLBPQ00341 1268 aaKnown RBP12.68□□□□□ -0.38
NEDD9-213ENST00000512665 CHRNDQ07001 517 aa12.68□□□□□ -0.38
NEDD9-213ENST00000512665 FASTKD5Q7L8L6 764 aaKnown RBP12.68□□□□□ -0.38
NEDD9-213ENST00000512665 UHRF1Q96T88 793 aaPredicted RBP12.68□□□□□ -0.38
NEDD9-213ENST00000512665 INPP5BP32019 993 aa12.67□□□□□ -0.38
NEDD9-213ENST00000512665 CRKP46108 304 aa12.67□□□□□ -0.38
NEDD9-213ENST00000512665 MFSD14BQ5SR56 506 aa12.67□□□□□ -0.38
NEDD9-213ENST00000512665 MPHOSPH8Q99549 860 aa12.67□□□□□ -0.38
NEDD9-213ENST00000512665 METTL22Q9BUU2 404 aaPredicted RBP12.67□□□□□ -0.38
NEDD9-213ENST00000512665 THEGQ9P2T0 379 aa12.67□□□□□ -0.38
NEDD9-213ENST00000512665 A0A0G2JLL6 359 aaPredicted RBP12.66□□□□□ -0.38
NEDD9-213ENST00000512665 SHHQ15465 462 aa12.66□□□□□ -0.38
NEDD9-213ENST00000512665 FAM110CQ1W6H9 321 aa12.66□□□□□ -0.38
NEDD9-213ENST00000512665 PRRT2Q7Z6L0 340 aaPredicted RBP12.66□□□□□ -0.38
NEDD9-213ENST00000512665 JARID2Q92833 1246 aaPredicted RBP12.66□□□□□ -0.38
NEDD9-213ENST00000512665 TAOK2Q9UL54 1235 aa12.66□□□□□ -0.38
NEDD9-213ENST00000512665 DOCK3Q8IZD9 2030 aa12.66□□□□□ -0.38
NEDD9-213ENST00000512665 ITGA6P23229 1130 aa12.65□□□□□ -0.38
NEDD9-213ENST00000512665 CNGB1Q14028 1251 aaPredicted RBP12.65□□□□□ -0.38
NEDD9-213ENST00000512665 SMCR8Q8TEV9 937 aaPredicted RBP12.65□□□□□ -0.38
NEDD9-213ENST00000512665 PLA2G12BQ9BX93 195 aa12.65□□□□□ -0.38
NEDD9-213ENST00000512665 TMOD2Q9NZR1 351 aa12.65□□□□□ -0.38
NEDD9-213ENST00000512665 CACNA1AO00555 2505 aa12.65□□□□□ -0.38
NEDD9-213ENST00000512665 MUC6Q6W4X9 2439 aa12.64□□□□□ -0.39
NEDD9-213ENST00000512665 RIPK4P57078 832 aa12.64□□□□□ -0.39
NEDD9-213ENST00000512665 MRPS5P82675 430 aaKnown RBP12.64□□□□□ -0.39
NEDD9-213ENST00000512665 AKNAD1Q5T1N1 836 aa12.64□□□□□ -0.39
NEDD9-213ENST00000512665 TDRD7Q8NHU6 1098 aaKnown RBP12.64□□□□□ -0.39
NEDD9-213ENST00000512665 MRIQ9BWK5 157 aa12.64□□□□□ -0.39
NEDD9-213ENST00000512665 PRKAG2Q9UGJ0 569 aa12.64□□□□□ -0.39
NEDD9-213ENST00000512665 GJD2Q9UKL4 321 aa12.64□□□□□ -0.39
NEDD9-213ENST00000512665 TRIM32Q13049 653 aa12.63□□□□□ -0.39
NEDD9-213ENST00000512665 C9orf50Q5SZB4 431 aa12.63□□□□□ -0.39
NEDD9-213ENST00000512665 TRIB2Q92519 343 aa12.63□□□□□ -0.39
NEDD9-213ENST00000512665 ZDHHC15Q96MV8 337 aa12.63□□□□□ -0.39
NEDD9-213ENST00000512665 JAG2Q9Y219 1238 aa12.63□□□□□ -0.39
NEDD9-213ENST00000512665 PTPRFP10586 1907 aa12.62□□□□□ -0.39
NEDD9-213ENST00000512665 SNAP23O00161 211 aa12.62□□□□□ -0.39
NEDD9-213ENST00000512665 DDX58O95786 925 aaKnown RBP12.62□□□□□ -0.39
NEDD9-213ENST00000512665 CSF1RP07333 972 aa12.62□□□□□ -0.39
NEDD9-213ENST00000512665 XRCC5P13010 732 aaKnown RBP12.62□□□□□ -0.39
NEDD9-213ENST00000512665 PRKAR2AP13861 404 aaKnown RBP12.62□□□□□ -0.39
NEDD9-213ENST00000512665 GRIN2CQ14957 1233 aa12.62□□□□□ -0.39
NEDD9-213ENST00000512665 LHX8Q68G74 356 aa12.62□□□□□ -0.39
NEDD9-213ENST00000512665 TRMT44Q8IYL2 757 aaKnown RBP12.62□□□□□ -0.39
NEDD9-213ENST00000512665 LRFN3Q9BTN0 628 aa12.62□□□□□ -0.39
NEDD9-213ENST00000512665 PHAXQ9H814 394 aaKnown RBP12.62□□□□□ -0.39
NEDD9-213ENST00000512665 XIRP2A4UGR9 3374 aa12.61□□□□□ -0.39
NEDD9-213ENST00000512665 PLXNB2O15031 1838 aa12.61□□□□□ -0.39
NEDD9-213ENST00000512665 IGKV5-2P06315 115 aa12.61□□□□□ -0.39
NEDD9-213ENST00000512665 CACNB3P54284 484 aa12.61□□□□□ -0.39
NEDD9-213ENST00000512665 DUSP27Q5VZP5 1158 aa12.61□□□□□ -0.39
NEDD9-213ENST00000512665 MIGA2Q7L4E1 593 aa12.61□□□□□ -0.39
NEDD9-213ENST00000512665 ANKRD13CQ8N6S4 541 aa12.61□□□□□ -0.39
NEDD9-213ENST00000512665 IL27Q8NEV9 243 aa12.61□□□□□ -0.39
NEDD9-213ENST00000512665 TEKT1Q969V4 418 aa12.61□□□□□ -0.39
NEDD9-213ENST00000512665 PNMA3Q9UL41 463 aa12.61□□□□□ -0.39
NEDD9-213ENST00000512665 FRMPD3Q5JV73 1810 aa12.6□□□□□ -0.39
NEDD9-213ENST00000512665 H7C1W4 665 aa12.6□□□□□ -0.39
NEDD9-213ENST00000512665 TAF5LO75529 589 aa12.6□□□□□ -0.39
NEDD9-213ENST00000512665 GCLCP48506 637 aaPredicted RBP12.6□□□□□ -0.39
NEDD9-213ENST00000512665 P2RX7Q99572 595 aaKnown RBP12.6□□□□□ -0.39
NEDD9-213ENST00000512665 AGTPBP1Q9UPW5 1226 aa12.6□□□□□ -0.39
NEDD9-213ENST00000512665 AFG3L2Q9Y4W6 797 aa12.6□□□□□ -0.39
NEDD9-213ENST00000512665 TMPOP42166 694 aaKnown RBP12.59□□□□□ -0.39
NEDD9-213ENST00000512665 APOBEC3HQ6NTF7 200 aaKnown RBP12.59□□□□□ -0.39
NEDD9-213ENST00000512665 ALYREFQ86V81 257 aaKnown RBP12.59□□□□□ -0.39
NEDD9-213ENST00000512665 TBC1D22AQ8WUA7 517 aa12.59□□□□□ -0.39
NEDD9-213ENST00000512665 FAM151AQ8WW52 585 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms