RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 NEK2P51955 445 aa7.68□□□□□ -1.18
CHD1-208ENST00000512392 MLC1Q15049 377 aa7.68□□□□□ -1.18
CHD1-208ENST00000512392 TM4SF20Q53R12 229 aa7.68□□□□□ -1.18
CHD1-208ENST00000512392 LYSMD3Q7Z3D4 306 aa7.68□□□□□ -1.18
CHD1-208ENST00000512392 VPS37AQ8NEZ2 397 aa7.68□□□□□ -1.18
CHD1-208ENST00000512392 CDH19Q9H159 772 aa7.68□□□□□ -1.18
CHD1-208ENST00000512392 FIGNL2A6NMB9 653 aa7.68□□□□□ -1.18
CHD1-208ENST00000512392 HALP42357 657 aa7.68□□□□□ -1.18
CHD1-208ENST00000512392 APOBRQ0VD83 1088 aa7.68□□□□□ -1.18
CHD1-208ENST00000512392 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.68□□□□□ -1.18
CHD1-208ENST00000512392 C2orf27AQ580R0 203 aa7.68□□□□□ -1.18
CHD1-208ENST00000512392 PI16Q6UXB8 463 aa7.68□□□□□ -1.18
CHD1-208ENST00000512392 MORC1Q86VD1 984 aa7.68□□□□□ -1.18
CHD1-208ENST00000512392 DGKHQ86XP1 1220 aa7.68□□□□□ -1.18
CHD1-208ENST00000512392 TRMT2BQ96GJ1 504 aaKnown RBP7.68□□□□□ -1.18
CHD1-208ENST00000512392 GPR101Q96P66 508 aaPredicted RBP7.68□□□□□ -1.18
CHD1-208ENST00000512392 SMAD5Q99717 465 aaKnown RBP7.68□□□□□ -1.18
CHD1-208ENST00000512392 CCDC8Q9H0W5 538 aaPredicted RBP7.68□□□□□ -1.18
CHD1-208ENST00000512392 DNMT3LQ9UJW3 386 aa7.68□□□□□ -1.18
CHD1-208ENST00000512392 SPATA31C2B4DYI2 1134 aa7.67□□□□□ -1.18
CHD1-208ENST00000512392 PDPK1O15530 556 aa7.67□□□□□ -1.18
CHD1-208ENST00000512392 SNRPBP14678 240 aaKnown RBP7.67□□□□□ -1.18
CHD1-208ENST00000512392 SARSP49591 514 aaKnown RBP7.67□□□□□ -1.18
CHD1-208ENST00000512392 EPHA4P54764 986 aa7.67□□□□□ -1.18
CHD1-208ENST00000512392 FAM160A1Q05DH4 1040 aa7.67□□□□□ -1.18
CHD1-208ENST00000512392 IFRD2Q12894 506 aaPredicted RBP7.67□□□□□ -1.18
CHD1-208ENST00000512392 TNS4Q8IZW8 715 aa7.67□□□□□ -1.18
CHD1-208ENST00000512392 CLASRPQ8N2M8 674 aaKnown RBP7.67□□□□□ -1.18
CHD1-208ENST00000512392 EAF1Q96JC9 268 aaPredicted RBP7.67□□□□□ -1.18
CHD1-208ENST00000512392 RETREG1Q9H6L5 497 aa7.67□□□□□ -1.18
CHD1-208ENST00000512392 SCHIP1Q9P0W5 487 aaPredicted RBP7.67□□□□□ -1.18
CHD1-208ENST00000512392 RABGAP1Q9Y3P9 1069 aa7.67□□□□□ -1.18
CHD1-208ENST00000512392 POTECB2RU33 542 aa7.66□□□□□ -1.18
CHD1-208ENST00000512392 IRS4O14654 1257 aaPredicted RBP7.66□□□□□ -1.18
CHD1-208ENST00000512392 SMAD7O15105 426 aaKnown RBP7.66□□□□□ -1.18
CHD1-208ENST00000512392 NBNO60934 754 aa7.66□□□□□ -1.18
CHD1-208ENST00000512392 PGRP06401 933 aa7.66□□□□□ -1.18
CHD1-208ENST00000512392 WDR44Q5JSH3 913 aa7.66□□□□□ -1.18
CHD1-208ENST00000512392 TMEM214Q6NUQ4 689 aaKnown RBP7.66□□□□□ -1.18
CHD1-208ENST00000512392 C16orf54Q6UWD8 224 aa7.66□□□□□ -1.18
CHD1-208ENST00000512392 KIAA0825Q8IV33 1275 aa7.66□□□□□ -1.18
CHD1-208ENST00000512392 TCEAL8Q8IYN2 117 aa7.66□□□□□ -1.18
CHD1-208ENST00000512392 JPH3Q8WXH2 748 aaPredicted RBP7.66□□□□□ -1.18
CHD1-208ENST00000512392 NUDT16Q96DE0 195 aaKnown RBP7.66□□□□□ -1.18
CHD1-208ENST00000512392 CSRNP1Q96S65 589 aa7.66□□□□□ -1.18
CHD1-208ENST00000512392 CENPOQ9BU64 300 aa7.66□□□□□ -1.18
CHD1-208ENST00000512392 SELENOOQ9BVL4 669 aa7.66□□□□□ -1.18
CHD1-208ENST00000512392 POLIQ9UNA4 740 aa7.66□□□□□ -1.18
CHD1-208ENST00000512392 GTF2A1LQ9UNN4 478 aa7.66□□□□□ -1.18
CHD1-208ENST00000512392 R3HCC1Q9Y3T6 440 aaKnown RBP7.66□□□□□ -1.18
CHD1-208ENST00000512392 PTCH2Q9Y6C5 1203 aa7.66□□□□□ -1.18
CHD1-208ENST00000512392 DIAPH1O60610 1272 aaKnown RBP7.66□□□□□ -1.18
CHD1-208ENST00000512392 SOX9P48436 509 aa7.66□□□□□ -1.18
CHD1-208ENST00000512392 FOXK2Q01167 660 aa7.66□□□□□ -1.18
CHD1-208ENST00000512392 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.66□□□□□ -1.18
CHD1-208ENST00000512392 GNASQ5JWF2 1037 aa7.66□□□□□ -1.18
CHD1-208ENST00000512392 PRICKLE2Q7Z3G6 844 aa7.66□□□□□ -1.18
CHD1-208ENST00000512392 MSL3Q8N5Y2 521 aaKnown RBP7.66□□□□□ -1.18
CHD1-208ENST00000512392 NBPF15Q8N660 670 aa7.66□□□□□ -1.18
CHD1-208ENST00000512392 FAM169BQ8N8A8 192 aa7.66□□□□□ -1.18
CHD1-208ENST00000512392 SKA1Q96BD8 255 aa7.66□□□□□ -1.18
CHD1-208ENST00000512392 ZBED6P86452 979 aa7.65□□□□□ -1.18
CHD1-208ENST00000512392 MTMR1Q13613 665 aa7.65□□□□□ -1.18
CHD1-208ENST00000512392 SEPT6Q14141 434 aa7.65□□□□□ -1.18
CHD1-208ENST00000512392 FAM102BQ5T8I3 360 aa7.65□□□□□ -1.18
CHD1-208ENST00000512392 C16orf46Q6P387 395 aa7.65□□□□□ -1.18
CHD1-208ENST00000512392 LVRNQ6Q4G3 990 aa7.65□□□□□ -1.18
CHD1-208ENST00000512392 KRT77Q7Z794 578 aa7.65□□□□□ -1.18
CHD1-208ENST00000512392 RNF180Q86T96 592 aa7.65□□□□□ -1.18
CHD1-208ENST00000512392 GJD3Q8N144 294 aa7.65□□□□□ -1.18
CHD1-208ENST00000512392 PPHLN1Q8NEY8 458 aaKnown RBP7.65□□□□□ -1.18
CHD1-208ENST00000512392 HOOK2Q96ED9 719 aa7.65□□□□□ -1.18
CHD1-208ENST00000512392 MPP4Q96JB8 637 aa7.65□□□□□ -1.18
CHD1-208ENST00000512392 CAAP1Q9H8G2 361 aa7.65□□□□□ -1.18
CHD1-208ENST00000512392 LGR6Q9HBX8 967 aa7.65□□□□□ -1.18
CHD1-208ENST00000512392 CWC25Q9NXE8 425 aaPredicted RBP7.65□□□□□ -1.18
CHD1-208ENST00000512392 PFDN2Q9UHV9 154 aa7.65□□□□□ -1.18
CHD1-208ENST00000512392 ISY1Q9ULR0 285 aaKnown RBP7.65□□□□□ -1.18
CHD1-208ENST00000512392 EIF1AYO14602 144 aaKnown RBP7.64□□□□□ -1.19
CHD1-208ENST00000512392 CLGNO14967 610 aa7.64□□□□□ -1.19
CHD1-208ENST00000512392 PIN1Q13526 163 aaPredicted RBP7.64□□□□□ -1.19
CHD1-208ENST00000512392 DDR2Q16832 855 aa7.64□□□□□ -1.19
CHD1-208ENST00000512392 CT47A1Q5JQC4 288 aaPredicted RBP7.64□□□□□ -1.19
CHD1-208ENST00000512392 ZNF787Q6DD87 383 aa7.64□□□□□ -1.19
CHD1-208ENST00000512392 MAGEB6Q8N7X4 407 aa7.64□□□□□ -1.19
CHD1-208ENST00000512392 JMYQ8N9B5 988 aa7.64□□□□□ -1.19
CHD1-208ENST00000512392 RHBDD1Q8TEB9 315 aa7.64□□□□□ -1.19
CHD1-208ENST00000512392 STIM2Q9P246 746 aa7.64□□□□□ -1.19
CHD1-208ENST00000512392 USP25Q9UHP3 1055 aa7.64□□□□□ -1.19
CHD1-208ENST00000512392 MCM8Q9UJA3 840 aa7.64□□□□□ -1.19
CHD1-208ENST00000512392 PLAAQ9Y263 795 aa7.64□□□□□ -1.19
CHD1-208ENST00000512392 SOBPA7XYQ1 873 aa7.64□□□□□ -1.19
CHD1-208ENST00000512392 VSTM5A8MXK1 200 aa7.64□□□□□ -1.19
CHD1-208ENST00000512392 TRIM27P14373 513 aa7.64□□□□□ -1.19
CHD1-208ENST00000512392 POU4F2Q12837 409 aa7.64□□□□□ -1.19
CHD1-208ENST00000512392 RASGRF1Q13972 1273 aa7.64□□□□□ -1.19
CHD1-208ENST00000512392 COX20Q5RI15 118 aa7.64□□□□□ -1.19
CHD1-208ENST00000512392 NBPF10Q6P3W6 841 aaKnown RBP7.64□□□□□ -1.19
CHD1-208ENST00000512392 SPATC1Q76KD6 591 aa7.64□□□□□ -1.19
CHD1-208ENST00000512392 THAP3Q8WTV1 239 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms