RNA–Protein interactions for RNA: ENST00000512147.5

CLDND1-225, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-225ENST00000512147 TBC1D16Q8TBP0 767 aa8.44□□□□□ -1.06
CLDND1-225ENST00000512147 USP16Q9Y5T5 823 aa8.44□□□□□ -1.06
CLDND1-225ENST00000512147 SPDYE5A6NIY4 337 aa8.43□□□□□ -1.06
CLDND1-225ENST00000512147 PER1O15534 1290 aaPredicted RBP8.43□□□□□ -1.06
CLDND1-225ENST00000512147 NTSR2O95665 410 aa8.43□□□□□ -1.06
CLDND1-225ENST00000512147 SAMD1Q6SPF0 538 aaPredicted RBP8.43□□□□□ -1.06
CLDND1-225ENST00000512147 ERO1BQ86YB8 467 aa8.43□□□□□ -1.06
CLDND1-225ENST00000512147 SUGP1Q8IWZ8 645 aaKnown RBP8.43□□□□□ -1.06
CLDND1-225ENST00000512147 ADSSL1Q8N142 457 aa8.43□□□□□ -1.06
CLDND1-225ENST00000512147 PARK7Q99497 189 aaKnown RBP8.43□□□□□ -1.06
CLDND1-225ENST00000512147 MGAMO43451 1857 aa8.43□□□□□ -1.06
CLDND1-225ENST00000512147 ERVV-1B6SEH8 477 aa8.42□□□□□ -1.06
CLDND1-225ENST00000512147 IRF6O14896 467 aa8.42□□□□□ -1.06
CLDND1-225ENST00000512147 EPHB4P54760 987 aa8.42□□□□□ -1.06
CLDND1-225ENST00000512147 RAB30Q15771 203 aa8.42□□□□□ -1.06
CLDND1-225ENST00000512147 POLKQ9UBT6 870 aa8.42□□□□□ -1.06
CLDND1-225ENST00000512147 MYO3BQ8WXR4 1341 aa8.42□□□□□ -1.06
CLDND1-225ENST00000512147 ASH1LQ9NR48 2969 aaKnown RBP8.42□□□□□ -1.06
CLDND1-225ENST00000512147 XIRP2A4UGR9 3374 aa8.42□□□□□ -1.06
CLDND1-225ENST00000512147 PRRC2BQ5JSZ5 2229 aaKnown RBP8.41□□□□□ -1.06
CLDND1-225ENST00000512147 ZNF804BA4D1E1 1349 aa8.41□□□□□ -1.06
CLDND1-225ENST00000512147 UBN2Q6ZU65 1347 aa8.41□□□□□ -1.06
CLDND1-225ENST00000512147 GRXCR1A8MXD5 290 aa8.41□□□□□ -1.06
CLDND1-225ENST00000512147 MYO1BO43795 1136 aa8.41□□□□□ -1.06
CLDND1-225ENST00000512147 ZIC2O95409 532 aaPredicted RBP8.41□□□□□ -1.06
CLDND1-225ENST00000512147 TRIM32Q13049 653 aa8.41□□□□□ -1.06
CLDND1-225ENST00000512147 AEBP1Q8IUX7 1158 aa8.41□□□□□ -1.06
CLDND1-225ENST00000512147 JAG2Q9Y219 1238 aa8.41□□□□□ -1.06
CLDND1-225ENST00000512147 COL4A6Q14031 1691 aa8.4□□□□□ -1.06
CLDND1-225ENST00000512147 DSG3P32926 999 aa8.4□□□□□ -1.06
CLDND1-225ENST00000512147 IRS1P35568 1242 aa8.4□□□□□ -1.06
CLDND1-225ENST00000512147 FPGSQ05932 587 aa8.4□□□□□ -1.06
CLDND1-225ENST00000512147 TEFQ10587 303 aa8.4□□□□□ -1.06
CLDND1-225ENST00000512147 DLGAP5Q15398 846 aa8.4□□□□□ -1.06
CLDND1-225ENST00000512147 BMP8AQ7Z5Y6 402 aa8.4□□□□□ -1.06
CLDND1-225ENST00000512147 PBXIP1Q96AQ6 731 aa8.4□□□□□ -1.06
CLDND1-225ENST00000512147 FSD1Q9BTV5 496 aa8.4□□□□□ -1.06
CLDND1-225ENST00000512147 MTCH2Q9Y6C9 303 aa8.4□□□□□ -1.06
CLDND1-225ENST00000512147 MAST2Q6P0Q8 1798 aa8.4□□□□□ -1.07
CLDND1-225ENST00000512147 PLXNA1Q9UIW2 1896 aa8.39□□□□□ -1.07
CLDND1-225ENST00000512147 TRIM43BA6NCK2 446 aa8.39□□□□□ -1.07
CLDND1-225ENST00000512147 H0Y858 1186 aa8.39□□□□□ -1.07
CLDND1-225ENST00000512147 UFL1O94874 794 aa8.39□□□□□ -1.07
CLDND1-225ENST00000512147 CYP2C8P10632 490 aa8.39□□□□□ -1.07
CLDND1-225ENST00000512147 PRKAR2AP13861 404 aaKnown RBP8.39□□□□□ -1.07
CLDND1-225ENST00000512147 POU3F3P20264 500 aaPredicted RBP8.39□□□□□ -1.07
CLDND1-225ENST00000512147 PARP10Q53GL7 1025 aa8.39□□□□□ -1.07
CLDND1-225ENST00000512147 AMER1Q5JTC6 1135 aaPredicted RBP8.39□□□□□ -1.07
CLDND1-225ENST00000512147 LHX8Q68G74 356 aa8.39□□□□□ -1.07
CLDND1-225ENST00000512147 SULT6B1Q6IMI4 303 aa8.39□□□□□ -1.07
CLDND1-225ENST00000512147 FBXW7Q969H0 707 aa8.39□□□□□ -1.07
CLDND1-225ENST00000512147 TRIM43Q96BQ3 446 aaPredicted RBP8.39□□□□□ -1.07
CLDND1-225ENST00000512147 ZBED3Q96IU2 234 aaPredicted RBP8.39□□□□□ -1.07
CLDND1-225ENST00000512147 UTP14AQ9BVJ6 771 aaKnown RBP8.39□□□□□ -1.07
CLDND1-225ENST00000512147 MXD3Q9BW11 206 aa8.39□□□□□ -1.07
CLDND1-225ENST00000512147 UPF3BQ9BZI7 483 aaKnown RBP8.39□□□□□ -1.07
CLDND1-225ENST00000512147 NKX2-4Q9H2Z4 354 aa8.39□□□□□ -1.07
CLDND1-225ENST00000512147 PDLIM7Q9NR12 457 aa8.39□□□□□ -1.07
CLDND1-225ENST00000512147 TLR9Q9NR96 1032 aa8.39□□□□□ -1.07
CLDND1-225ENST00000512147 KNSTRNQ9Y448 316 aa8.39□□□□□ -1.07
CLDND1-225ENST00000512147 GCN1Q92616 2671 aaKnown RBP8.39□□□□□ -1.07
CLDND1-225ENST00000512147 GAKO14976 1311 aa8.38□□□□□ -1.07
CLDND1-225ENST00000512147 RAG1P15918 1043 aa8.38□□□□□ -1.07
CLDND1-225ENST00000512147 PPIL2Q13356 520 aa8.38□□□□□ -1.07
CLDND1-225ENST00000512147 RASA3Q14644 834 aa8.38□□□□□ -1.07
CLDND1-225ENST00000512147 DACT2Q5SW24 774 aa8.38□□□□□ -1.07
CLDND1-225ENST00000512147 SH3RF1Q7Z6J0 888 aa8.38□□□□□ -1.07
CLDND1-225ENST00000512147 POTEDQ86YR6 584 aa8.38□□□□□ -1.07
CLDND1-225ENST00000512147 ZNF34Q8IZ26 560 aa8.38□□□□□ -1.07
CLDND1-225ENST00000512147 NGEFQ8N5V2 710 aa8.38□□□□□ -1.07
CLDND1-225ENST00000512147 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.38□□□□□ -1.07
CLDND1-225ENST00000512147 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.38□□□□□ -1.07
CLDND1-225ENST00000512147 NKD2Q969F2 451 aaPredicted RBP8.38□□□□□ -1.07
CLDND1-225ENST00000512147 VEZTQ9HBM0 779 aa8.38□□□□□ -1.07
CLDND1-225ENST00000512147 ANKIB1Q9P2G1 1089 aa8.38□□□□□ -1.07
CLDND1-225ENST00000512147 AOX1Q06278 1338 aa8.37□□□□□ -1.07
CLDND1-225ENST00000512147 MAP3K15Q6ZN16 1313 aa8.37□□□□□ -1.07
CLDND1-225ENST00000512147 HCLS1P14317 486 aaPredicted RBP8.37□□□□□ -1.07
CLDND1-225ENST00000512147 NBPF20Q3BBV1 942 aa8.37□□□□□ -1.07
CLDND1-225ENST00000512147 EPHA10Q5JZY3 1008 aa8.37□□□□□ -1.07
CLDND1-225ENST00000512147 MAP3K21Q5TCX8 1036 aa8.37□□□□□ -1.07
CLDND1-225ENST00000512147 SLC39A5Q6ZMH5 540 aa8.37□□□□□ -1.07
CLDND1-225ENST00000512147 KIF6Q6ZMV9 814 aa8.37□□□□□ -1.07
CLDND1-225ENST00000512147 KIAA0825Q8IV33 1275 aa8.37□□□□□ -1.07
CLDND1-225ENST00000512147 GGA1Q9UJY5 639 aa8.37□□□□□ -1.07
CLDND1-225ENST00000512147 TACC3Q9Y6A5 838 aa8.37□□□□□ -1.07
CLDND1-225ENST00000512147 SPTBN2O15020 2390 aa8.37□□□□□ -1.07
CLDND1-225ENST00000512147 ZFYVE26Q68DK2 2539 aa8.37□□□□□ -1.07
CLDND1-225ENST00000512147 LRRC37AA6NMS7 1700 aa8.37□□□□□ -1.07
CLDND1-225ENST00000512147 PLXNA3P51805 1871 aa8.36□□□□□ -1.07
CLDND1-225ENST00000512147 USP9XQ93008 2570 aaPredicted RBP8.36□□□□□ -1.07
CLDND1-225ENST00000512147 OTOFQ9HC10 1997 aa8.36□□□□□ -1.07
CLDND1-225ENST00000512147 CLRN2A0PK11 232 aa8.36□□□□□ -1.07
CLDND1-225ENST00000512147 SNRPA1P09661 255 aaKnown RBP8.36□□□□□ -1.07
CLDND1-225ENST00000512147 NBL1P41271 181 aa8.36□□□□□ -1.07
CLDND1-225ENST00000512147 TRIM60Q495X7 471 aa8.36□□□□□ -1.07
CLDND1-225ENST00000512147 STRIP1Q5VSL9 837 aa8.36□□□□□ -1.07
CLDND1-225ENST00000512147 CCDC174Q6PII3 467 aa8.36□□□□□ -1.07
CLDND1-225ENST00000512147 PODXL2Q9NZ53 605 aa8.36□□□□□ -1.07
CLDND1-225ENST00000512147 PSME4Q14997 1843 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms