RNA–Protein interactions for RNA: ENST00000511873.6

SMN2-211, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 431 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-211ENST00000511873 ACSS3Q9H6R3 686 aa9.9□□□□□ -0.82
SMN2-211ENST00000511873 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.89□□□□□ -0.83
SMN2-211ENST00000511873 FCGRTP55899 365 aa9.89□□□□□ -0.83
SMN2-211ENST00000511873 PLCB3Q01970 1234 aa9.89□□□□□ -0.83
SMN2-211ENST00000511873 DUSP27Q5VZP5 1158 aa9.89□□□□□ -0.83
SMN2-211ENST00000511873 ZC3H12CQ9C0D7 883 aaKnown RBP9.89□□□□□ -0.83
SMN2-211ENST00000511873 GSX1Q9H4S2 264 aaPredicted RBP9.89□□□□□ -0.83
SMN2-211ENST00000511873 TIMELESSQ9UNS1 1208 aa9.89□□□□□ -0.83
SMN2-211ENST00000511873 FAM170BA6NMN3 283 aa9.88□□□□□ -0.83
SMN2-211ENST00000511873 LIG1P18858 919 aa9.88□□□□□ -0.83
SMN2-211ENST00000511873 MSMPQ1L6U9 139 aa9.88□□□□□ -0.83
SMN2-211ENST00000511873 GATA6Q92908 595 aa9.88□□□□□ -0.83
SMN2-211ENST00000511873 PPP1R9AQ9ULJ8 1098 aa9.88□□□□□ -0.83
SMN2-211ENST00000511873 SLFN14P0C7P3 912 aa9.87□□□□□ -0.83
SMN2-211ENST00000511873 CYP27A1Q02318 531 aa9.87□□□□□ -0.83
SMN2-211ENST00000511873 PPP2R3AQ06190 1150 aa9.87□□□□□ -0.83
SMN2-211ENST00000511873 PI16Q6UXB8 463 aa9.87□□□□□ -0.83
SMN2-211ENST00000511873 BCO2Q9BYV7 579 aa9.87□□□□□ -0.83
SMN2-211ENST00000511873 CCDC86Q9H6F5 360 aaKnown RBP9.87□□□□□ -0.83
SMN2-211ENST00000511873 TMEM39AQ9NV64 488 aa9.87□□□□□ -0.83
SMN2-211ENST00000511873 ANGEL1Q9UNK9 670 aaKnown RBP9.87□□□□□ -0.83
SMN2-211ENST00000511873 DAGLAQ9Y4D2 1042 aa9.87□□□□□ -0.83
SMN2-211ENST00000511873 XRCC5P13010 732 aaKnown RBP9.86□□□□□ -0.83
SMN2-211ENST00000511873 TAL1P17542 331 aaPredicted RBP9.86□□□□□ -0.83
SMN2-211ENST00000511873 MAPK1P28482 360 aa9.86□□□□□ -0.83
SMN2-211ENST00000511873 WDR89Q96FK6 387 aaPredicted RBP9.86□□□□□ -0.83
SMN2-211ENST00000511873 GPN3Q9UHW5 284 aaPredicted RBP9.86□□□□□ -0.83
SMN2-211ENST00000511873 KRTAP9-6A0A140TA67 174 aa9.85□□□□□ -0.83
SMN2-211ENST00000511873 PAX4O43316 350 aa9.85□□□□□ -0.83
SMN2-211ENST00000511873 HNRNPUQ00839 825 aaKnown RBP eCLIP9.85□□□□□ -0.83
SMN2-211ENST00000511873 DSC3Q14574 896 aa9.85□□□□□ -0.83
SMN2-211ENST00000511873 LGR6Q9HBX8 967 aa9.85□□□□□ -0.83
SMN2-211ENST00000511873 PNMA6FA0A0J9YX94 578 aa9.84□□□□□ -0.83
SMN2-211ENST00000511873 DYNC1LI2O43237 492 aaPredicted RBP9.84□□□□□ -0.83
SMN2-211ENST00000511873 TREHO43280 583 aa9.84□□□□□ -0.83
SMN2-211ENST00000511873 GSTP1P09211 210 aaKnown RBP9.84□□□□□ -0.83
SMN2-211ENST00000511873 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.84□□□□□ -0.83
SMN2-211ENST00000511873 SEZ6L2Q6UXD5 910 aa9.84□□□□□ -0.83
SMN2-211ENST00000511873 ZNF765Q7L2R6 523 aa9.84□□□□□ -0.83
SMN2-211ENST00000511873 C1GALT1Q9NS00 363 aa9.84□□□□□ -0.83
SMN2-211ENST00000511873 CCDC39Q9UFE4 941 aa9.84□□□□□ -0.83
SMN2-211ENST00000511873 AKAP2Q9Y2D5 859 aa9.84□□□□□ -0.83
SMN2-211ENST00000511873 TMPRSS2O15393 492 aa9.83□□□□□ -0.84
SMN2-211ENST00000511873 NXPE4Q6UWF7 544 aa9.83□□□□□ -0.84
SMN2-211ENST00000511873 PIDD1Q9HB75 910 aa9.83□□□□□ -0.84
SMN2-211ENST00000511873 LRRC4CQ9HCJ2 640 aa9.83□□□□□ -0.84
SMN2-211ENST00000511873 KRT82Q9NSB4 513 aa9.83□□□□□ -0.84
SMN2-211ENST00000511873 BSDC1Q9NW68 430 aaPredicted RBP9.83□□□□□ -0.84
SMN2-211ENST00000511873 CRIM1Q9NZV1 1036 aa9.83□□□□□ -0.84
SMN2-211ENST00000511873 ZNF862O60290 1169 aa9.82□□□□□ -0.84
SMN2-211ENST00000511873 PRNPP04156 253 aa9.82□□□□□ -0.84
SMN2-211ENST00000511873 ID3Q02535 119 aa9.82□□□□□ -0.84
SMN2-211ENST00000511873 ENOX2Q16206 610 aaKnown RBP9.82□□□□□ -0.84
SMN2-211ENST00000511873 KIF4BQ2VIQ3 1234 aa9.82□□□□□ -0.84
SMN2-211ENST00000511873 OGFOD3Q6PK18 319 aa9.82□□□□□ -0.84
SMN2-211ENST00000511873 KCNB2Q92953 911 aa9.82□□□□□ -0.84
SMN2-211ENST00000511873 FANCD2OSQ96PS1 177 aa9.82□□□□□ -0.84
SMN2-211ENST00000511873 ATXN3LQ9H3M9 355 aa9.82□□□□□ -0.84
SMN2-211ENST00000511873 VSIG10LQ86VR7 867 aa9.8□□□□□ -0.84
SMN2-211ENST00000511873 ABI1Q8IZP0 508 aa9.8□□□□□ -0.84
SMN2-211ENST00000511873 FBXL18Q96ME1 805 aa9.8□□□□□ -0.84
SMN2-211ENST00000511873 DISC1Q9NRI5 854 aa9.8□□□□□ -0.84
SMN2-211ENST00000511873 ZC3H7BQ9UGR2 993 aaKnown RBP9.8□□□□□ -0.84
SMN2-211ENST00000511873 ADGRE2Q9UHX3 823 aa9.8□□□□□ -0.84
SMN2-211ENST00000511873 PDZD3Q86UT5 571 aa9.79□□□□□ -0.84
SMN2-211ENST00000511873 SULF2Q8IWU5 870 aa9.79□□□□□ -0.84
SMN2-211ENST00000511873 TP53INP2Q8IXH6 220 aa9.79□□□□□ -0.84
SMN2-211ENST00000511873 RNGTTO60942 597 aaKnown RBP9.78□□□□□ -0.84
SMN2-211ENST00000511873 ARNTP27540 789 aa9.78□□□□□ -0.84
SMN2-211ENST00000511873 CYP27C1Q4G0S4 372 aa9.78□□□□□ -0.84
SMN2-211ENST00000511873 ZSCAN29Q8IWY8 852 aaPredicted RBP9.78□□□□□ -0.84
SMN2-211ENST00000511873 SMYD4Q8IYR2 804 aaPredicted RBP9.78□□□□□ -0.84
SMN2-211ENST00000511873 PCDHGC5Q9Y5F6 944 aa9.78□□□□□ -0.84
SMN2-211ENST00000511873 MAPK8P45983 427 aa9.77□□□□□ -0.85
SMN2-211ENST00000511873 TTLL4Q14679 1199 aa9.77□□□□□ -0.85
SMN2-211ENST00000511873 STK35Q8TDR2 534 aa9.77□□□□□ -0.85
SMN2-211ENST00000511873 EMILIN2Q9BXX0 1053 aa9.77□□□□□ -0.85
SMN2-211ENST00000511873 NME2P22392 152 aa9.76□□□□□ -0.85
SMN2-211ENST00000511873 MAP1SQ66K74 1059 aaPredicted RBP9.76□□□□□ -0.85
SMN2-211ENST00000511873 IVNS1ABPQ9Y6Y0 642 aa9.76□□□□□ -0.85
SMN2-211ENST00000511873 HCLS1P14317 486 aaPredicted RBP9.75□□□□□ -0.85
SMN2-211ENST00000511873 TXKP42681 527 aa9.75□□□□□ -0.85
SMN2-211ENST00000511873 CDK5R2Q13319 367 aa9.75□□□□□ -0.85
SMN2-211ENST00000511873 NFXL1Q6ZNB6 911 aa9.75□□□□□ -0.85
SMN2-211ENST00000511873 FLCNQ8NFG4 579 aa9.75□□□□□ -0.85
SMN2-211ENST00000511873 FBF1Q8TES7 1133 aa9.75□□□□□ -0.85
SMN2-211ENST00000511873 KRTAP4-12Q9BQ66 201 aa9.75□□□□□ -0.85
SMN2-211ENST00000511873 SRCIN1Q9C0H9 1055 aa9.75□□□□□ -0.85
SMN2-211ENST00000511873 CBX8Q9HC52 389 aa9.75□□□□□ -0.85
SMN2-211ENST00000511873 FAM87AP0C7U9 286 aa9.74□□□□□ -0.85
SMN2-211ENST00000511873 GSTT1P30711 240 aa9.74□□□□□ -0.85
SMN2-211ENST00000511873 C3orf58Q8NDZ4 430 aa9.74□□□□□ -0.85
SMN2-211ENST00000511873 NECAB3Q96P71 396 aaPredicted RBP9.74□□□□□ -0.85
SMN2-211ENST00000511873 FMNL2Q96PY5 1086 aa9.74□□□□□ -0.85
SMN2-211ENST00000511873 CEP44Q9C0F1 390 aa9.74□□□□□ -0.85
SMN2-211ENST00000511873 PCOLCE2Q9UKZ9 415 aa9.74□□□□□ -0.85
SMN2-211ENST00000511873 RNF114Q9Y508 228 aa9.74□□□□□ -0.85
SMN2-211ENST00000511873 KCNA1Q09470 495 aa9.73□□□□□ -0.85
SMN2-211ENST00000511873 ZC3H12AQ5D1E8 599 aaKnown RBP9.73□□□□□ -0.85
SMN2-211ENST00000511873 TPTE2Q6XPS3 522 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms