RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 DDX60LQ5H9U9 1706 aaKnown RBP15.37■□□□□ 0.05
COPS4-210ENST00000511708 FLT3LGP49771 235 aa15.37■□□□□ 0.05
COPS4-210ENST00000511708 NEXNQ0ZGT2 675 aa15.37■□□□□ 0.05
COPS4-210ENST00000511708 GUCD1Q96NT3 240 aa15.37■□□□□ 0.05
COPS4-210ENST00000511708 COL2A1P02458 1487 aaPredicted RBP15.37■□□□□ 0.05
COPS4-210ENST00000511708 RPAP1Q9BWH6 1393 aaPredicted RBP15.36■□□□□ 0.05
COPS4-210ENST00000511708 POTEB2H3BUK9 544 aa15.36■□□□□ 0.05
COPS4-210ENST00000511708 FAM109BQ6ICB4 259 aaPredicted RBP15.36■□□□□ 0.05
COPS4-210ENST00000511708 FAM83AQ86UY5 434 aa15.36■□□□□ 0.05
COPS4-210ENST00000511708 ANKLE1Q8NAG6 615 aa15.36■□□□□ 0.05
COPS4-210ENST00000511708 RUNDC1Q96C34 613 aa15.36■□□□□ 0.05
COPS4-210ENST00000511708 PARK7Q99497 189 aaKnown RBP15.36■□□□□ 0.05
COPS4-210ENST00000511708 PTPRFP10586 1907 aa15.36■□□□□ 0.05
COPS4-210ENST00000511708 ANKRD18BA2A2Z9 1011 aa15.35■□□□□ 0.05
COPS4-210ENST00000511708 SYN1P17600 705 aa15.35■□□□□ 0.05
COPS4-210ENST00000511708 INPP5BP32019 993 aa15.35■□□□□ 0.05
COPS4-210ENST00000511708 CACNB3P54284 484 aa15.35■□□□□ 0.05
COPS4-210ENST00000511708 GCKRQ14397 625 aa15.35■□□□□ 0.05
COPS4-210ENST00000511708 CCDC30Q5VVM6 783 aa15.35■□□□□ 0.05
COPS4-210ENST00000511708 GPAT2Q6NUI2 795 aa15.35■□□□□ 0.05
COPS4-210ENST00000511708 C8orf58Q8NAV2 365 aa15.35■□□□□ 0.05
COPS4-210ENST00000511708 HOOK2Q96ED9 719 aa15.35■□□□□ 0.05
COPS4-210ENST00000511708 CYP2C8P10632 490 aa15.34■□□□□ 0.05
COPS4-210ENST00000511708 HDLBPQ00341 1268 aaKnown RBP15.34■□□□□ 0.05
COPS4-210ENST00000511708 GRIK5Q16478 980 aa15.34■□□□□ 0.05
COPS4-210ENST00000511708 FKBP1CQ5VVH2 108 aa15.34■□□□□ 0.05
COPS4-210ENST00000511708 DCAF15Q66K64 600 aa15.34■□□□□ 0.05
COPS4-210ENST00000511708 ZNF341Q9BYN7 854 aa15.34■□□□□ 0.05
COPS4-210ENST00000511708 UBE2OQ9C0C9 1292 aaKnown RBP15.34■□□□□ 0.05
COPS4-210ENST00000511708 IFT57Q9NWB7 429 aa15.34■□□□□ 0.05
COPS4-210ENST00000511708 ZNF112Q9UJU3 913 aa15.34■□□□□ 0.05
COPS4-210ENST00000511708 DNAH12Q6ZR08 3092 aa15.34■□□□□ 0.05
COPS4-210ENST00000511708 AK9Q5TCS8 1911 aa15.33■□□□□ 0.05
COPS4-210ENST00000511708 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.33■□□□□ 0.04
COPS4-210ENST00000511708 CHMP4AQ9BY43 222 aa15.32■□□□□ 0.04
COPS4-210ENST00000511708 NBPF3Q9H094 633 aa15.32■□□□□ 0.04
COPS4-210ENST00000511708 TNPO2O14787 897 aaKnown RBP15.31■□□□□ 0.04
COPS4-210ENST00000511708 GNAI1P63096 354 aa15.31■□□□□ 0.04
COPS4-210ENST00000511708 NOL9Q5SY16 702 aaKnown RBP15.31■□□□□ 0.04
COPS4-210ENST00000511708 MIGA2Q7L4E1 593 aa15.31■□□□□ 0.04
COPS4-210ENST00000511708 FAM84BQ96KN1 310 aaPredicted RBP15.31■□□□□ 0.04
COPS4-210ENST00000511708 CXCL11O14625 94 aa15.3■□□□□ 0.04
COPS4-210ENST00000511708 HIBADHP31937 336 aaKnown RBP15.3■□□□□ 0.04
COPS4-210ENST00000511708 GYG1P46976 350 aa15.3■□□□□ 0.04
COPS4-210ENST00000511708 FOXO4P98177 505 aa15.3■□□□□ 0.04
COPS4-210ENST00000511708 IFIT5Q13325 482 aaKnown RBP15.3■□□□□ 0.04
COPS4-210ENST00000511708 TEKT1Q969V4 418 aa15.3■□□□□ 0.04
COPS4-210ENST00000511708 ZDHHC15Q96MV8 337 aa15.3■□□□□ 0.04
COPS4-210ENST00000511708 MRIQ9BWK5 157 aa15.3■□□□□ 0.04
COPS4-210ENST00000511708 TMOD2Q9NZR1 351 aa15.3■□□□□ 0.04
COPS4-210ENST00000511708 CACNA1FO60840 1977 aa15.29■□□□□ 0.04
COPS4-210ENST00000511708 PHIPQ8WWQ0 1821 aa15.29■□□□□ 0.04
COPS4-210ENST00000511708 CDH23Q9H251 3354 aa15.29■□□□□ 0.04
COPS4-210ENST00000511708 UBE4AQ14139 1066 aa15.29■□□□□ 0.04
COPS4-210ENST00000511708 APOBEC3HQ6NTF7 200 aaKnown RBP15.29■□□□□ 0.04
COPS4-210ENST00000511708 G2E3Q7L622 706 aa15.29■□□□□ 0.04
COPS4-210ENST00000511708 TSPYL6Q8N831 410 aa15.29■□□□□ 0.04
COPS4-210ENST00000511708 C11orf49Q9H6J7 331 aa15.29■□□□□ 0.04
COPS4-210ENST00000511708 PFASO15067 1338 aa15.28■□□□□ 0.04
COPS4-210ENST00000511708 PLIN1O60240 522 aa15.28■□□□□ 0.04
COPS4-210ENST00000511708 COL9A1P20849 921 aa15.28■□□□□ 0.04
COPS4-210ENST00000511708 MYH16Q9H6N6 1097 aa15.28■□□□□ 0.04
COPS4-210ENST00000511708 OGDHLQ9ULD0 1010 aa15.28■□□□□ 0.04
COPS4-210ENST00000511708 SLC45A1Q9Y2W3 748 aa15.28■□□□□ 0.04
COPS4-210ENST00000511708 PLXNB2O15031 1838 aa15.28■□□□□ 0.04
COPS4-210ENST00000511708 A0A0G2JLL6 359 aaPredicted RBP15.27■□□□□ 0.04
COPS4-210ENST00000511708 LDHAL6AQ6ZMR3 332 aa15.27■□□□□ 0.04
COPS4-210ENST00000511708 PRRT2Q7Z6L0 340 aaPredicted RBP15.27■□□□□ 0.04
COPS4-210ENST00000511708 ZNF594Q96JF6 807 aaPredicted RBP15.27■□□□□ 0.04
COPS4-210ENST00000511708 FAM161BQ96MY7 647 aa15.27■□□□□ 0.04
COPS4-210ENST00000511708 NCOR1O75376 2440 aa15.26■□□□□ 0.03
COPS4-210ENST00000511708 HMGCRP04035 888 aa15.26■□□□□ 0.03
COPS4-210ENST00000511708 FASTKD5Q7L8L6 764 aaKnown RBP15.26■□□□□ 0.03
COPS4-210ENST00000511708 FBXO33Q7Z6M2 555 aa15.26■□□□□ 0.03
COPS4-210ENST00000511708 LINS1Q8NG48 757 aa15.26■□□□□ 0.03
COPS4-210ENST00000511708 TBC1D22AQ8WUA7 517 aa15.26■□□□□ 0.03
COPS4-210ENST00000511708 FAM151AQ8WW52 585 aa15.26■□□□□ 0.03
COPS4-210ENST00000511708 COA7Q96BR5 231 aa15.26■□□□□ 0.03
COPS4-210ENST00000511708 DOCK2Q92608 1830 aa15.25■□□□□ 0.03
COPS4-210ENST00000511708 COL6A1P12109 1028 aa15.25■□□□□ 0.03
COPS4-210ENST00000511708 CALD1Q05682 793 aaKnown RBP15.25■□□□□ 0.03
COPS4-210ENST00000511708 RALBP1Q15311 655 aa15.25■□□□□ 0.03
COPS4-210ENST00000511708 HHIPL2Q6UWX4 724 aa15.25■□□□□ 0.03
COPS4-210ENST00000511708 STK31Q9BXU1 1019 aa15.25■□□□□ 0.03
COPS4-210ENST00000511708 HMX1Q9NP08 348 aaPredicted RBP15.25■□□□□ 0.03
COPS4-210ENST00000511708 CNNM1Q9NRU3 951 aa15.25■□□□□ 0.03
COPS4-210ENST00000511708 TAOK2Q9UL54 1235 aa15.25■□□□□ 0.03
COPS4-210ENST00000511708 ADAMTS8Q9UP79 889 aa15.25■□□□□ 0.03
COPS4-210ENST00000511708 TRIM32Q13049 653 aa15.24■□□□□ 0.03
COPS4-210ENST00000511708 EPHA10Q5JZY3 1008 aa15.24■□□□□ 0.03
COPS4-210ENST00000511708 ZNF697Q5TEC3 545 aa15.24■□□□□ 0.03
COPS4-210ENST00000511708 LMBR1LQ6UX01 489 aa15.24■□□□□ 0.03
COPS4-210ENST00000511708 MAFAQ8NHW3 353 aaPredicted RBP15.24■□□□□ 0.03
COPS4-210ENST00000511708 DNAAF4Q8WXU2 420 aa15.24■□□□□ 0.03
COPS4-210ENST00000511708 CDX2Q99626 313 aaPredicted RBP15.24■□□□□ 0.03
COPS4-210ENST00000511708 IQSEC3Q9UPP2 1182 aaPredicted RBP15.24■□□□□ 0.03
COPS4-210ENST00000511708 CHMP3Q9Y3E7 222 aa15.24■□□□□ 0.03
COPS4-210ENST00000511708 DOCK1Q14185 1865 aa15.24■□□□□ 0.03
COPS4-210ENST00000511708 MAST2Q6P0Q8 1798 aa15.24■□□□□ 0.03
COPS4-210ENST00000511708 MYH13Q9UKX3 1938 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms