RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 GALNT12Q8IXK2 581 aa6.25□□□□□ -1.41
TOPBP1-208ENST00000511439 LATS2Q9NRM7 1088 aa6.25□□□□□ -1.41
TOPBP1-208ENST00000511439 CCDC87Q9NVE4 849 aa6.25□□□□□ -1.41
TOPBP1-208ENST00000511439 BRPF3Q9ULD4 1205 aa6.25□□□□□ -1.41
TOPBP1-208ENST00000511439 ANGEL1Q9UNK9 670 aaKnown RBP6.25□□□□□ -1.41
TOPBP1-208ENST00000511439 CEP170Q5SW79 1584 aa6.25□□□□□ -1.41
TOPBP1-208ENST00000511439 FOSL1P15407 271 aa6.24□□□□□ -1.41
TOPBP1-208ENST00000511439 SOX4Q06945 474 aaPredicted RBP6.24□□□□□ -1.41
TOPBP1-208ENST00000511439 PDE3BQ13370 1112 aa6.24□□□□□ -1.41
TOPBP1-208ENST00000511439 LCE3BQ5TA77 95 aa6.24□□□□□ -1.41
TOPBP1-208ENST00000511439 FBXL6Q8N531 539 aa6.24□□□□□ -1.41
TOPBP1-208ENST00000511439 FMNL2Q96PY5 1086 aa6.24□□□□□ -1.41
TOPBP1-208ENST00000511439 LIN7BQ9HAP6 207 aa6.24□□□□□ -1.41
TOPBP1-208ENST00000511439 BIN2Q9UBW5 565 aaPredicted RBP6.24□□□□□ -1.41
TOPBP1-208ENST00000511439 GRIN2BQ13224 1484 aa6.23□□□□□ -1.41
TOPBP1-208ENST00000511439 TDRD9Q8NDG6 1382 aaKnown RBP6.23□□□□□ -1.41
TOPBP1-208ENST00000511439 NDUFB5O43674 189 aa6.23□□□□□ -1.41
TOPBP1-208ENST00000511439 F13BP05160 661 aa6.23□□□□□ -1.41
TOPBP1-208ENST00000511439 MAP7Q14244 749 aa6.23□□□□□ -1.41
TOPBP1-208ENST00000511439 C2CD4AQ8NCU7 369 aaPredicted RBP6.23□□□□□ -1.41
TOPBP1-208ENST00000511439 EZH1Q92800 747 aaPredicted RBP6.23□□□□□ -1.41
TOPBP1-208ENST00000511439 POLA1P09884 1462 aaPredicted RBP6.22□□□□□ -1.41
TOPBP1-208ENST00000511439 A0A1W2PP55 124 aa6.22□□□□□ -1.41
TOPBP1-208ENST00000511439 DLGAP3O95886 979 aa6.22□□□□□ -1.41
TOPBP1-208ENST00000511439 ADH5P11766 374 aa6.22□□□□□ -1.41
TOPBP1-208ENST00000511439 DRD2P14416 443 aa6.22□□□□□ -1.41
TOPBP1-208ENST00000511439 CYP27A1Q02318 531 aa6.22□□□□□ -1.41
TOPBP1-208ENST00000511439 POU4F3Q15319 338 aa6.22□□□□□ -1.41
TOPBP1-208ENST00000511439 FBLIM1Q8WUP2 373 aa6.22□□□□□ -1.41
TOPBP1-208ENST00000511439 TBC1D32Q96NH3 1257 aa6.22□□□□□ -1.41
TOPBP1-208ENST00000511439 CITED4Q96RK1 184 aa6.22□□□□□ -1.41
TOPBP1-208ENST00000511439 TCF12Q99081 682 aa6.22□□□□□ -1.41
TOPBP1-208ENST00000511439 NRSN2Q9GZP1 204 aa6.22□□□□□ -1.41
TOPBP1-208ENST00000511439 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.21□□□□□ -1.42
TOPBP1-208ENST00000511439 METTL12A8MUP2 240 aa6.21□□□□□ -1.42
TOPBP1-208ENST00000511439 ADAMTS4O75173 837 aa6.21□□□□□ -1.42
TOPBP1-208ENST00000511439 POLR3DP05423 398 aaPredicted RBP6.21□□□□□ -1.42
TOPBP1-208ENST00000511439 MAOBP27338 520 aa6.21□□□□□ -1.42
TOPBP1-208ENST00000511439 HNRNPUQ00839 825 aaKnown RBP eCLIP6.21□□□□□ -1.42
TOPBP1-208ENST00000511439 MSMPQ1L6U9 139 aa6.21□□□□□ -1.42
TOPBP1-208ENST00000511439 KIAA0319Q5VV43 1072 aa6.21□□□□□ -1.42
TOPBP1-208ENST00000511439 CDPF1Q6NVV7 123 aa6.21□□□□□ -1.42
TOPBP1-208ENST00000511439 ZAR1Q86SH2 424 aa6.21□□□□□ -1.42
TOPBP1-208ENST00000511439 FBXL18Q96ME1 805 aa6.21□□□□□ -1.42
TOPBP1-208ENST00000511439 CORO1BQ9BR76 489 aa6.21□□□□□ -1.42
TOPBP1-208ENST00000511439 RAD18Q9NS91 495 aa6.21□□□□□ -1.42
TOPBP1-208ENST00000511439 DCTN4Q9UJW0 460 aa6.21□□□□□ -1.42
TOPBP1-208ENST00000511439 PTPRMP28827 1452 aa6.21□□□□□ -1.42
TOPBP1-208ENST00000511439 BTBD11A6QL63 1104 aa6.2□□□□□ -1.42
TOPBP1-208ENST00000511439 CYP26A1O43174 497 aa6.2□□□□□ -1.42
TOPBP1-208ENST00000511439 CPNE3O75131 537 aaKnown RBP6.2□□□□□ -1.42
TOPBP1-208ENST00000511439 PRNPP04156 253 aa6.2□□□□□ -1.42
TOPBP1-208ENST00000511439 HOXA10P31260 410 aaPredicted RBP6.2□□□□□ -1.42
TOPBP1-208ENST00000511439 GRIA4P48058 902 aa6.2□□□□□ -1.42
TOPBP1-208ENST00000511439 PTPN12Q05209 780 aaKnown RBP6.2□□□□□ -1.42
TOPBP1-208ENST00000511439 ZNF423Q2M1K9 1284 aa6.2□□□□□ -1.42
TOPBP1-208ENST00000511439 TMCO4Q5TGY1 634 aa6.2□□□□□ -1.42
TOPBP1-208ENST00000511439 DUSP27Q5VZP5 1158 aa6.2□□□□□ -1.42
TOPBP1-208ENST00000511439 VSIG10LQ86VR7 867 aa6.2□□□□□ -1.42
TOPBP1-208ENST00000511439 PRKAG2Q9UGJ0 569 aa6.2□□□□□ -1.42
TOPBP1-208ENST00000511439 RNF114Q9Y508 228 aa6.2□□□□□ -1.42
TOPBP1-208ENST00000511439 SHROOM2Q13796 1616 aa6.2□□□□□ -1.42
TOPBP1-208ENST00000511439 B3GALT4O96024 378 aa6.19□□□□□ -1.42
TOPBP1-208ENST00000511439 YBX3P16989 372 aaKnown RBP eCLIP6.19□□□□□ -1.42
TOPBP1-208ENST00000511439 ITPKAP23677 461 aa6.19□□□□□ -1.42
TOPBP1-208ENST00000511439 AP3B2Q13367 1082 aa6.19□□□□□ -1.42
TOPBP1-208ENST00000511439 CCDC27Q2M243 656 aa6.19□□□□□ -1.42
TOPBP1-208ENST00000511439 SPRED3Q2MJR0 410 aa6.19□□□□□ -1.42
TOPBP1-208ENST00000511439 RBCK1Q9BYM8 510 aa6.19□□□□□ -1.42
TOPBP1-208ENST00000511439 DNAJC25Q9H1X3 360 aa6.19□□□□□ -1.42
TOPBP1-208ENST00000511439 EHD4Q9H223 541 aa6.19□□□□□ -1.42
TOPBP1-208ENST00000511439 BSDC1Q9NW68 430 aaPredicted RBP6.19□□□□□ -1.42
TOPBP1-208ENST00000511439 CCDC39Q9UFE4 941 aa6.19□□□□□ -1.42
TOPBP1-208ENST00000511439 ADGRE2Q9UHX3 823 aa6.19□□□□□ -1.42
TOPBP1-208ENST00000511439 ACTL7BQ9Y614 415 aa6.19□□□□□ -1.42
TOPBP1-208ENST00000511439 SYNGAP1Q96PV0 1343 aa6.19□□□□□ -1.42
TOPBP1-208ENST00000511439 PPRC1Q5VV67 1664 aaKnown RBP6.18□□□□□ -1.42
TOPBP1-208ENST00000511439 RAD54L2Q9Y4B4 1467 aa6.18□□□□□ -1.42
TOPBP1-208ENST00000511439 IGHA2P01877 340 aa6.18□□□□□ -1.42
TOPBP1-208ENST00000511439 MAPK1P28482 360 aa6.18□□□□□ -1.42
TOPBP1-208ENST00000511439 AKAP4Q5JQC9 854 aa6.18□□□□□ -1.42
TOPBP1-208ENST00000511439 ZNF576Q9H609 170 aa6.18□□□□□ -1.42
TOPBP1-208ENST00000511439 MED1Q15648 1581 aaPredicted RBP6.18□□□□□ -1.42
TOPBP1-208ENST00000511439 SOGA1O94964 1423 aa6.17□□□□□ -1.42
TOPBP1-208ENST00000511439 TEX14Q8IWB6 1497 aa6.17□□□□□ -1.42
TOPBP1-208ENST00000511439 RAB6AP20340 208 aa6.17□□□□□ -1.42
TOPBP1-208ENST00000511439 RPS26P11Q5JNZ5 115 aaPredicted RBP6.17□□□□□ -1.42
TOPBP1-208ENST00000511439 DYMQ7RTS9 669 aa6.17□□□□□ -1.42
TOPBP1-208ENST00000511439 KRTAP19-1Q8IUB9 90 aa6.17□□□□□ -1.42
TOPBP1-208ENST00000511439 AGBL5Q8NDL9 886 aa6.17□□□□□ -1.42
TOPBP1-208ENST00000511439 ASB16Q96NS5 453 aa6.17□□□□□ -1.42
TOPBP1-208ENST00000511439 FAM129BQ96TA1 746 aa6.17□□□□□ -1.42
TOPBP1-208ENST00000511439 PODXL2Q9NZ53 605 aa6.17□□□□□ -1.42
TOPBP1-208ENST00000511439 AP4E1Q9UPM8 1137 aa6.17□□□□□ -1.42
TOPBP1-208ENST00000511439 TRAK1Q9UPV9 953 aa6.17□□□□□ -1.42
TOPBP1-208ENST00000511439 ADCY10Q96PN6 1610 aa6.17□□□□□ -1.42
TOPBP1-208ENST00000511439 NFICP08651 508 aa6.16□□□□□ -1.42
TOPBP1-208ENST00000511439 ADMP35318 185 aa6.16□□□□□ -1.42
TOPBP1-208ENST00000511439 ASPAP45381 313 aa6.16□□□□□ -1.42
TOPBP1-208ENST00000511439 MFAP1P55081 439 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms