RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 MAGEC2Q9UBF1 373 aaPredicted RBP5.94□□□□□ -1.46
PHF3-210ENST00000509876 ME1P48163 572 aa5.94□□□□□ -1.46
PHF3-210ENST00000509876 KRT85P78386 507 aa5.94□□□□□ -1.46
PHF3-210ENST00000509876 POTEAQ6S8J7 498 aa5.94□□□□□ -1.46
PHF3-210ENST00000509876 ERMNQ8TAM6 284 aa5.94□□□□□ -1.46
PHF3-210ENST00000509876 GZF1Q9H116 711 aaPredicted RBP5.94□□□□□ -1.46
PHF3-210ENST00000509876 DACH1Q9UI36 760 aa5.94□□□□□ -1.46
PHF3-210ENST00000509876 SAMM50Q9Y512 469 aa5.94□□□□□ -1.46
PHF3-210ENST00000509876 CCT2P78371 535 aaKnown RBP5.94□□□□□ -1.46
PHF3-210ENST00000509876 CLRN2A0PK11 232 aa5.93□□□□□ -1.46
PHF3-210ENST00000509876 PATL2C9JE40 543 aaKnown RBP5.93□□□□□ -1.46
PHF3-210ENST00000509876 PUS3Q9BZE2 481 aaKnown RBP5.93□□□□□ -1.46
PHF3-210ENST00000509876 GPSM2P81274 684 aa5.93□□□□□ -1.46
PHF3-210ENST00000509876 GLT8D2Q9H1C3 349 aa5.93□□□□□ -1.46
PHF3-210ENST00000509876 CHD2O14647 1828 aaKnown RBP5.93□□□□□ -1.46
PHF3-210ENST00000509876 LETM1O95202 739 aaPredicted RBP5.93□□□□□ -1.46
PHF3-210ENST00000509876 CERKLQ49MI3 558 aaPredicted RBP5.93□□□□□ -1.46
PHF3-210ENST00000509876 PLEKHM2Q8IWE5 1019 aa5.93□□□□□ -1.46
PHF3-210ENST00000509876 SMC5Q8IY18 1101 aa5.93□□□□□ -1.46
PHF3-210ENST00000509876 ZNF34Q8IZ26 560 aa5.93□□□□□ -1.46
PHF3-210ENST00000509876 TMEM87AQ8NBN3 555 aa5.93□□□□□ -1.46
PHF3-210ENST00000509876 DHX36Q9H2U1 1008 aaKnown RBP5.93□□□□□ -1.46
PHF3-210ENST00000509876 ZNRF3Q9ULT6 936 aa5.93□□□□□ -1.46
PHF3-210ENST00000509876 ANAPC15P60006 121 aa5.93□□□□□ -1.46
PHF3-210ENST00000509876 ZYXQ15942 572 aaKnown RBP5.93□□□□□ -1.46
PHF3-210ENST00000509876 CD2APQ9Y5K6 639 aa5.93□□□□□ -1.46
PHF3-210ENST00000509876 NBPF26B4DH59 902 aa5.93□□□□□ -1.46
PHF3-210ENST00000509876 IBSPP21815 317 aaPredicted RBP5.93□□□□□ -1.46
PHF3-210ENST00000509876 CFAP100Q494V2 611 aa5.93□□□□□ -1.46
PHF3-210ENST00000509876 NBPF10Q6P3W6 841 aaKnown RBP5.93□□□□□ -1.46
PHF3-210ENST00000509876 NBPF15Q8N660 670 aa5.93□□□□□ -1.46
PHF3-210ENST00000509876 CSRNP1Q96S65 589 aa5.93□□□□□ -1.46
PHF3-210ENST00000509876 LZTS2Q9BRK4 669 aa5.93□□□□□ -1.46
PHF3-210ENST00000509876 UPF3BQ9BZI7 483 aaKnown RBP5.93□□□□□ -1.46
PHF3-210ENST00000509876 NALCNQ8IZF0 1738 aa5.93□□□□□ -1.46
PHF3-210ENST00000509876 ECM2O94769 699 aaPredicted RBP5.92□□□□□ -1.46
PHF3-210ENST00000509876 PHKA1P46020 1223 aa5.92□□□□□ -1.46
PHF3-210ENST00000509876 CCNA1P78396 465 aa5.92□□□□□ -1.46
PHF3-210ENST00000509876 SLC10A4Q96EP9 437 aa5.92□□□□□ -1.46
PHF3-210ENST00000509876 HAUS7Q99871 368 aa5.92□□□□□ -1.46
PHF3-210ENST00000509876 MINPP1Q9UNW1 487 aa5.92□□□□□ -1.46
PHF3-210ENST00000509876 ATP6V0A2Q9Y487 856 aa5.92□□□□□ -1.46
PHF3-210ENST00000509876 LMNB1P20700 586 aa5.92□□□□□ -1.46
PHF3-210ENST00000509876 CALML3P27482 149 aa5.92□□□□□ -1.46
PHF3-210ENST00000509876 GNA11P29992 359 aa5.92□□□□□ -1.46
PHF3-210ENST00000509876 SLC1A4P43007 532 aa5.92□□□□□ -1.46
PHF3-210ENST00000509876 TRIM28Q13263 835 aaKnown RBP5.92□□□□□ -1.46
PHF3-210ENST00000509876 TMEM87BQ96K49 555 aa5.92□□□□□ -1.46
PHF3-210ENST00000509876 GPCPD1Q9NPB8 672 aa5.92□□□□□ -1.46
PHF3-210ENST00000509876 INTS5Q6P9B9 1019 aaKnown RBP5.92□□□□□ -1.46
PHF3-210ENST00000509876 CHURC1Q8WUH1 139 aa5.92□□□□□ -1.46
PHF3-210ENST00000509876 SPATA32Q96LK8 384 aa5.92□□□□□ -1.46
PHF3-210ENST00000509876 RGS12O14924 1447 aa5.92□□□□□ -1.46
PHF3-210ENST00000509876 PPARAQ07869 468 aa5.92□□□□□ -1.46
PHF3-210ENST00000509876 Q6ZUG5 572 aa5.92□□□□□ -1.46
PHF3-210ENST00000509876 TRMT2AQ8IZ69 625 aaKnown RBP5.92□□□□□ -1.46
PHF3-210ENST00000509876 CALML4Q96GE6 196 aa5.92□□□□□ -1.46
PHF3-210ENST00000509876 ORC3Q9UBD5 711 aaPredicted RBP5.92□□□□□ -1.46
PHF3-210ENST00000509876 BCL9O00512 1426 aa5.92□□□□□ -1.46
PHF3-210ENST00000509876 CEMIPQ8WUJ3 1361 aa5.92□□□□□ -1.46
PHF3-210ENST00000509876 RGL2O15211 777 aa5.92□□□□□ -1.46
PHF3-210ENST00000509876 PDE6AP16499 860 aa5.92□□□□□ -1.46
PHF3-210ENST00000509876 ABCB5Q2M3G0 1257 aa5.92□□□□□ -1.46
PHF3-210ENST00000509876 CREB3L3Q68CJ9 461 aa5.92□□□□□ -1.46
PHF3-210ENST00000509876 CKAP2LQ8IYA6 745 aa5.92□□□□□ -1.46
PHF3-210ENST00000509876 BRF1Q92994 677 aa5.92□□□□□ -1.46
PHF3-210ENST00000509876 PYM1Q9BRP8 204 aaKnown RBP5.92□□□□□ -1.46
PHF3-210ENST00000509876 PLA2G12BQ9BX93 195 aa5.92□□□□□ -1.46
PHF3-210ENST00000509876 LRRC27Q9C0I9 530 aa5.92□□□□□ -1.46
PHF3-210ENST00000509876 IPO7O95373 1038 aaKnown RBP5.92□□□□□ -1.46
PHF3-210ENST00000509876 GYS1P13807 737 aa5.92□□□□□ -1.46
PHF3-210ENST00000509876 CHMLP26374 656 aa5.92□□□□□ -1.46
PHF3-210ENST00000509876 UBE3CQ15386 1083 aa5.92□□□□□ -1.46
PHF3-210ENST00000509876 PNMA8AQ86V59 439 aaPredicted RBP5.92□□□□□ -1.46
PHF3-210ENST00000509876 GPHNQ9NQX3 736 aaPredicted RBP5.92□□□□□ -1.46
PHF3-210ENST00000509876 TCP11L1Q9NUJ3 509 aa5.92□□□□□ -1.46
PHF3-210ENST00000509876 TBC1D10BQ4KMP7 808 aaPredicted RBP5.91□□□□□ -1.46
PHF3-210ENST00000509876 TNPO1Q92973 898 aaKnown RBP5.91□□□□□ -1.46
PHF3-210ENST00000509876 BACH2Q9BYV9 841 aa5.91□□□□□ -1.46
PHF3-210ENST00000509876 SLIT3O75094 1523 aa5.91□□□□□ -1.46
PHF3-210ENST00000509876 CELF1Q92879 486 aaKnown RBP5.91□□□□□ -1.46
PHF3-210ENST00000509876 SPC25Q9HBM1 224 aa5.91□□□□□ -1.46
PHF3-210ENST00000509876 ATP8A2Q9NTI2 1148 aa5.91□□□□□ -1.46
PHF3-210ENST00000509876 FIBPO43427 364 aa5.91□□□□□ -1.46
PHF3-210ENST00000509876 SMC2O95347 1197 aa5.91□□□□□ -1.46
PHF3-210ENST00000509876 BMP15O95972 392 aa5.91□□□□□ -1.46
PHF3-210ENST00000509876 ADORA1P30542 326 aa5.91□□□□□ -1.46
PHF3-210ENST00000509876 SF3B3Q15393 1217 aaKnown RBP5.91□□□□□ -1.46
PHF3-210ENST00000509876 KIF4BQ2VIQ3 1234 aa5.91□□□□□ -1.46
PHF3-210ENST00000509876 DHX32Q7L7V1 743 aaKnown RBP5.91□□□□□ -1.46
PHF3-210ENST00000509876 KRI1Q8N9T8 703 aaKnown RBP5.91□□□□□ -1.46
PHF3-210ENST00000509876 CCDC17Q96LX7 622 aa5.91□□□□□ -1.46
PHF3-210ENST00000509876 DSCC1Q9BVC3 393 aa5.91□□□□□ -1.46
PHF3-210ENST00000509876 GOLGA6L3A6NEY3 463 aa5.91□□□□□ -1.46
PHF3-210ENST00000509876 SPDYE4A6NLX3 237 aa5.91□□□□□ -1.46
PHF3-210ENST00000509876 KIF20AO95235 890 aa5.91□□□□□ -1.46
PHF3-210ENST00000509876 PCP11498 1178 aaKnown RBP5.91□□□□□ -1.46
PHF3-210ENST00000509876 RPS12P25398 132 aaKnown RBP5.91□□□□□ -1.46
PHF3-210ENST00000509876 CRKP46108 304 aa5.91□□□□□ -1.46
PHF3-210ENST00000509876 STXBP4Q6ZWJ1 553 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms