RNA–Protein interactions for RNA: ENST00000509529.1

CAST-226, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-226ENST00000509529 EFCAB5A4FU69 1503 aa2.96□□□□□ -1.93
CAST-226ENST00000509529 SHROOM2Q13796 1616 aa2.96□□□□□ -1.93
CAST-226ENST00000509529 A6NJR5 290 aa2.96□□□□□ -1.94
CAST-226ENST00000509529 SOGA1O94964 1423 aa2.96□□□□□ -1.94
CAST-226ENST00000509529 NCLP19338 710 aaKnown RBP2.96□□□□□ -1.94
CAST-226ENST00000509529 FUT4P22083 530 aa2.96□□□□□ -1.94
CAST-226ENST00000509529 TTC39BQ5VTQ0 682 aaPredicted RBP2.96□□□□□ -1.94
CAST-226ENST00000509529 STK11IPQ8N1F8 1099 aa2.96□□□□□ -1.94
CAST-226ENST00000509529 SPATA31E1Q6ZUB1 1445 aa2.96□□□□□ -1.94
CAST-226ENST00000509529 UACAQ9BZF9 1416 aa2.96□□□□□ -1.94
CAST-226ENST00000509529 TSPAN15O95858 294 aa2.96□□□□□ -1.94
CAST-226ENST00000509529 CD8BP10966 210 aa2.96□□□□□ -1.94
CAST-226ENST00000509529 LARP1Q6PKG0 1096 aaKnown RBP2.96□□□□□ -1.94
CAST-226ENST00000509529 ZSCAN18Q8TBC5 510 aaPredicted RBP2.96□□□□□ -1.94
CAST-226ENST00000509529 HHIPQ96QV1 700 aa2.96□□□□□ -1.94
CAST-226ENST00000509529 ABI2Q9NYB9 513 aaPredicted RBP2.96□□□□□ -1.94
CAST-226ENST00000509529 KANSL3Q9P2N6 904 aa2.96□□□□□ -1.94
CAST-226ENST00000509529 SOX13Q9UN79 622 aa2.96□□□□□ -1.94
CAST-226ENST00000509529 TCOF1Q13428 1488 aaKnown RBP2.95□□□□□ -1.94
CAST-226ENST00000509529 MBD5Q9P267 1494 aa2.95□□□□□ -1.94
CAST-226ENST00000509529 HFM1A2PYH4 1435 aa2.95□□□□□ -1.94
CAST-226ENST00000509529 LRPPRCP42704 1394 aaKnown RBP2.95□□□□□ -1.94
CAST-226ENST00000509529 FSD2A1L4K1 749 aa2.95□□□□□ -1.94
CAST-226ENST00000509529 NFKBIEO00221 500 aa2.95□□□□□ -1.94
CAST-226ENST00000509529 TRPA1O75762 1119 aa2.95□□□□□ -1.94
CAST-226ENST00000509529 NFICP08651 508 aa2.95□□□□□ -1.94
CAST-226ENST00000509529 CD96P40200 585 aa2.95□□□□□ -1.94
CAST-226ENST00000509529 CYP27A1Q02318 531 aa2.95□□□□□ -1.94
CAST-226ENST00000509529 L1TD1Q5T7N2 865 aaKnown RBP2.95□□□□□ -1.94
CAST-226ENST00000509529 SIAH1Q8IUQ4 282 aa2.95□□□□□ -1.94
CAST-226ENST00000509529 WWC1Q8IX03 1113 aa2.95□□□□□ -1.94
CAST-226ENST00000509529 ARL4DP49703 201 aa2.95□□□□□ -1.94
CAST-226ENST00000509529 TAF3Q5VWG9 929 aa2.95□□□□□ -1.94
CAST-226ENST00000509529 ANKMY2Q8IV38 441 aa2.95□□□□□ -1.94
CAST-226ENST00000509529 YIPF2Q9BWQ6 316 aa2.95□□□□□ -1.94
CAST-226ENST00000509529 MAFBQ9Y5Q3 323 aaPredicted RBP2.95□□□□□ -1.94
CAST-226ENST00000509529 PTPN23Q9H3S7 1636 aa2.95□□□□□ -1.94
CAST-226ENST00000509529 PLXNC1O60486 1568 aa2.95□□□□□ -1.94
CAST-226ENST00000509529 ZNF503-AS2A6NEH8 195 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 USP17L15C9J2P7 530 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 USP17L10C9JJH3 530 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 USP17L13C9JLJ4 530 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 USP17L12C9JPN9 530 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 USP17L11C9JVI0 530 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 USP17L21D6R901 530 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 USP17L18D6R9N7 530 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 USP17L22D6RA61 530 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 USP17L17D6RBQ6 530 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 USP17L19D6RCP7 530 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 USP17L20D6RJB6 530 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 SOX1O00570 391 aaPredicted RBP2.94□□□□□ -1.94
CAST-226ENST00000509529 RAB6AP20340 208 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 FAM193AP78312 1265 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 SOX4Q06945 474 aaPredicted RBP2.94□□□□□ -1.94
CAST-226ENST00000509529 USP17L24Q0WX57 530 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 MLANAQ16655 118 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 PIK3R5Q8WYR1 880 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 SEMA6CQ9H3T2 930 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 RAPGEFL1Q9UHV5 662 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 CUX1P39880 1505 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 LRRC9Q6ZRR7 1453 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 FYCO1Q9BQS8 1478 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 PDIA4P13667 645 aaKnown RBP2.94□□□□□ -1.94
CAST-226ENST00000509529 FKBP5Q13451 457 aaPredicted RBP2.94□□□□□ -1.94
CAST-226ENST00000509529 SAP130Q9H0E3 1048 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 TFIP11Q9UBB9 837 aaKnown RBP2.94□□□□□ -1.94
CAST-226ENST00000509529 ACTL7BQ9Y614 415 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 RAB3GAP2Q9H2M9 1393 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 SAMD9Q5K651 1589 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 GOLGA6L3A6NEY3 463 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 ANP32CO43423 234 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 ADH5P11766 374 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 EXOSC6Q5RKV6 272 aaKnown RBP2.94□□□□□ -1.94
CAST-226ENST00000509529 PLD6Q8N2A8 252 aaKnown RBP2.94□□□□□ -1.94
CAST-226ENST00000509529 MISP3Q96FF7 219 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 BCANQ96GW7 911 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 BACH2Q9BYV9 841 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 DZANK1Q9NVP4 752 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 CAMSAP2Q08AD1 1489 aa2.94□□□□□ -1.94
CAST-226ENST00000509529 PDE2AO00408 941 aaPredicted RBP2.93□□□□□ -1.94
CAST-226ENST00000509529 DYNC1LI2O43237 492 aaPredicted RBP2.93□□□□□ -1.94
CAST-226ENST00000509529 INHBBP09529 407 aa2.93□□□□□ -1.94
CAST-226ENST00000509529 MAP7Q14244 749 aa2.93□□□□□ -1.94
CAST-226ENST00000509529 HS1BP3Q53T59 392 aa2.93□□□□□ -1.94
CAST-226ENST00000509529 VN1R5Q7Z5H4 357 aa2.93□□□□□ -1.94
CAST-226ENST00000509529 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2.93□□□□□ -1.94
CAST-226ENST00000509529 CRIM1Q9NZV1 1036 aa2.93□□□□□ -1.94
CAST-226ENST00000509529 KIF14Q15058 1648 aa2.93□□□□□ -1.94
CAST-226ENST00000509529 FAM196BA6NMK8 535 aa2.93□□□□□ -1.94
CAST-226ENST00000509529 BRD2P25440 801 aaKnown RBP2.93□□□□□ -1.94
CAST-226ENST00000509529 PDE4CQ08493 712 aa2.93□□□□□ -1.94
CAST-226ENST00000509529 IKBKEQ14164 716 aa2.93□□□□□ -1.94
CAST-226ENST00000509529 KANK4Q5T7N3 995 aaPredicted RBP2.93□□□□□ -1.94
CAST-226ENST00000509529 ZSWIM9Q86XI8 627 aa2.93□□□□□ -1.94
CAST-226ENST00000509529 PI4K2BQ8TCG2 481 aa2.93□□□□□ -1.94
CAST-226ENST00000509529 IPO4Q8TEX9 1081 aaKnown RBP2.93□□□□□ -1.94
CAST-226ENST00000509529 C1GALT1Q9NS00 363 aa2.93□□□□□ -1.94
CAST-226ENST00000509529 TMEM63CQ9P1W3 806 aa2.93□□□□□ -1.94
CAST-226ENST00000509529 FNDC3AQ9Y2H6 1198 aaKnown RBP2.93□□□□□ -1.94
CAST-226ENST00000509529 REREQ9P2R6 1566 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms