RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 HMGCRP04035 888 aa17.51■□□□□ 0.39
HMGCR-208ENST00000509431 TMPOP42166 694 aaKnown RBP17.51■□□□□ 0.39
HMGCR-208ENST00000509431 MDM2Q00987 491 aaPredicted RBP17.51■□□□□ 0.39
HMGCR-208ENST00000509431 MFSD14BQ5SR56 506 aa17.51■□□□□ 0.39
HMGCR-208ENST00000509431 FAM83AQ86UY5 434 aa17.51■□□□□ 0.39
HMGCR-208ENST00000509431 HMX1Q9NP08 348 aaPredicted RBP17.51■□□□□ 0.39
HMGCR-208ENST00000509431 CYP2C8P10632 490 aa17.5■□□□□ 0.39
HMGCR-208ENST00000509431 CRKP46108 304 aa17.5■□□□□ 0.39
HMGCR-208ENST00000509431 TMOD2Q9NZR1 351 aa17.5■□□□□ 0.39
HMGCR-208ENST00000509431 TAOK2Q9UL54 1235 aa17.5■□□□□ 0.39
HMGCR-208ENST00000509431 OGDHLQ9ULD0 1010 aa17.5■□□□□ 0.39
HMGCR-208ENST00000509431 JAG2Q9Y219 1238 aa17.5■□□□□ 0.39
HMGCR-208ENST00000509431 LAS1LQ9Y4W2 734 aaKnown RBP17.5■□□□□ 0.39
HMGCR-208ENST00000509431 RPAP1Q9BWH6 1393 aaPredicted RBP17.5■□□□□ 0.39
HMGCR-208ENST00000509431 CXCL11O14625 94 aa17.49■□□□□ 0.39
HMGCR-208ENST00000509431 FKBP1CQ5VVH2 108 aa17.49■□□□□ 0.39
HMGCR-208ENST00000509431 GPAT2Q6NUI2 795 aa17.49■□□□□ 0.39
HMGCR-208ENST00000509431 LBHD1Q9BQE6 289 aaPredicted RBP17.49■□□□□ 0.39
HMGCR-208ENST00000509431 PFASO15067 1338 aa17.48■□□□□ 0.39
HMGCR-208ENST00000509431 A0A1B0GUL6 1792 aa17.48■□□□□ 0.39
HMGCR-208ENST00000509431 MUC3AQ02505 3323 aa17.48■□□□□ 0.39
HMGCR-208ENST00000509431 FOSL2P15408 326 aa17.48■□□□□ 0.39
HMGCR-208ENST00000509431 HDLBPQ00341 1268 aaKnown RBP17.48■□□□□ 0.39
HMGCR-208ENST00000509431 FASTKD5Q7L8L6 764 aaKnown RBP17.48■□□□□ 0.39
HMGCR-208ENST00000509431 MYLIPQ8WY64 445 aa17.48■□□□□ 0.39
HMGCR-208ENST00000509431 PLA2G12BQ9BX93 195 aa17.48■□□□□ 0.39
HMGCR-208ENST00000509431 SLC45A1Q9Y2W3 748 aa17.48■□□□□ 0.39
HMGCR-208ENST00000509431 SNAP23O00161 211 aa17.47■□□□□ 0.39
HMGCR-208ENST00000509431 INPP5BP32019 993 aa17.47■□□□□ 0.39
HMGCR-208ENST00000509431 MAP3K12Q12852 859 aa17.47■□□□□ 0.39
HMGCR-208ENST00000509431 ARIH1Q9Y4X5 557 aaPredicted RBP17.47■□□□□ 0.39
HMGCR-208ENST00000509431 NCOR1O75376 2440 aa17.46■□□□□ 0.39
HMGCR-208ENST00000509431 TAF5LO75529 589 aa17.46■□□□□ 0.39
HMGCR-208ENST00000509431 NEXNQ0ZGT2 675 aa17.46■□□□□ 0.39
HMGCR-208ENST00000509431 NOL9Q5SY16 702 aaKnown RBP17.46■□□□□ 0.39
HMGCR-208ENST00000509431 ZNF112Q9UJU3 913 aa17.46■□□□□ 0.39
HMGCR-208ENST00000509431 SYNGAP1Q96PV0 1343 aa17.46■□□□□ 0.38
HMGCR-208ENST00000509431 IGKV5-2P06315 115 aa17.45■□□□□ 0.38
HMGCR-208ENST00000509431 COL6A1P12109 1028 aa17.45■□□□□ 0.38
HMGCR-208ENST00000509431 TDRD7Q8NHU6 1098 aaKnown RBP17.45■□□□□ 0.38
HMGCR-208ENST00000509431 CHMP4AQ9BY43 222 aa17.45■□□□□ 0.38
HMGCR-208ENST00000509431 MAP3K2Q9Y2U5 619 aa17.45■□□□□ 0.38
HMGCR-208ENST00000509431 LAMA2P24043 3122 aaKnown RBP17.44■□□□□ 0.38
HMGCR-208ENST00000509431 ANKRD18BA2A2Z9 1011 aa17.44■□□□□ 0.38
HMGCR-208ENST00000509431 H7C1W4 665 aa17.44■□□□□ 0.38
HMGCR-208ENST00000509431 CSF1RP07333 972 aa17.44■□□□□ 0.38
HMGCR-208ENST00000509431 UBE3BQ7Z3V4 1068 aa17.44■□□□□ 0.38
HMGCR-208ENST00000509431 SMCR8Q8TEV9 937 aaPredicted RBP17.44■□□□□ 0.38
HMGCR-208ENST00000509431 CACNB3P54284 484 aa17.43■□□□□ 0.38
HMGCR-208ENST00000509431 SMAD3P84022 425 aaKnown RBP17.43■□□□□ 0.38
HMGCR-208ENST00000509431 MIGA2Q7L4E1 593 aa17.43■□□□□ 0.38
HMGCR-208ENST00000509431 TEKT1Q969V4 418 aa17.43■□□□□ 0.38
HMGCR-208ENST00000509431 A0A0G2JLL6 359 aaPredicted RBP17.42■□□□□ 0.38
HMGCR-208ENST00000509431 LRRC26Q2I0M4 334 aa17.42■□□□□ 0.38
HMGCR-208ENST00000509431 KSR2Q6VAB6 950 aa17.42■□□□□ 0.38
HMGCR-208ENST00000509431 PRRT2Q7Z6L0 340 aaPredicted RBP17.42■□□□□ 0.38
HMGCR-208ENST00000509431 MRIQ9BWK5 157 aa17.42■□□□□ 0.38
HMGCR-208ENST00000509431 AK9Q5TCS8 1911 aa17.41■□□□□ 0.38
HMGCR-208ENST00000509431 NEURL1BA8MQ27 555 aa17.41■□□□□ 0.38
HMGCR-208ENST00000509431 FAM110CQ1W6H9 321 aa17.41■□□□□ 0.38
HMGCR-208ENST00000509431 ZDHHC15Q96MV8 337 aa17.41■□□□□ 0.38
HMGCR-208ENST00000509431 TTYH1Q9H313 450 aaPredicted RBP17.41■□□□□ 0.38
HMGCR-208ENST00000509431 TBC1D22AQ8WUA7 517 aa17.4■□□□□ 0.38
HMGCR-208ENST00000509431 PRKAG2Q9UGJ0 569 aa17.4■□□□□ 0.38
HMGCR-208ENST00000509431 PTPRFP10586 1907 aa17.39■□□□□ 0.37
HMGCR-208ENST00000509431 MAST2Q6P0Q8 1798 aa17.39■□□□□ 0.37
HMGCR-208ENST00000509431 PI4KAP2A4QPH2 592 aa17.39■□□□□ 0.37
HMGCR-208ENST00000509431 HIBADHP31937 336 aaKnown RBP17.39■□□□□ 0.37
HMGCR-208ENST00000509431 NEUROD2Q15784 382 aa17.39■□□□□ 0.37
HMGCR-208ENST00000509431 CWF19L2Q2TBE0 894 aaKnown RBP17.39■□□□□ 0.37
HMGCR-208ENST00000509431 MAP3K21Q5TCX8 1036 aa17.39■□□□□ 0.37
HMGCR-208ENST00000509431 GADL1Q6ZQY3 521 aa17.39■□□□□ 0.37
HMGCR-208ENST00000509431 ANKRD13CQ8N6S4 541 aa17.39■□□□□ 0.37
HMGCR-208ENST00000509431 PI4KAP1Q8N8J0 262 aa17.39■□□□□ 0.37
HMGCR-208ENST00000509431 ATXN2LQ8WWM7 1075 aaKnown RBP17.39■□□□□ 0.37
HMGCR-208ENST00000509431 TRIM32Q13049 653 aa17.38■□□□□ 0.37
HMGCR-208ENST00000509431 IFIT5Q13325 482 aaKnown RBP17.38■□□□□ 0.37
HMGCR-208ENST00000509431 FAM151AQ8WW52 585 aa17.38■□□□□ 0.37
HMGCR-208ENST00000509431 C1QTNF1Q9BXJ1 281 aa17.38■□□□□ 0.37
HMGCR-208ENST00000509431 MBIPQ9NS73 344 aa17.38■□□□□ 0.37
HMGCR-208ENST00000509431 PNMA3Q9UL41 463 aa17.38■□□□□ 0.37
HMGCR-208ENST00000509431 TRIM35Q9UPQ4 493 aa17.38■□□□□ 0.37
HMGCR-208ENST00000509431 MAST3O60307 1309 aa17.38■□□□□ 0.37
HMGCR-208ENST00000509431 UBE4AQ14139 1066 aa17.37■□□□□ 0.37
HMGCR-208ENST00000509431 CCDC30Q5VVM6 783 aa17.37■□□□□ 0.37
HMGCR-208ENST00000509431 GJD2Q9UKL4 321 aa17.37■□□□□ 0.37
HMGCR-208ENST00000509431 LTBP2Q14767 1821 aa17.37■□□□□ 0.37
HMGCR-208ENST00000509431 PRKAR2AP13861 404 aaKnown RBP17.36■□□□□ 0.37
HMGCR-208ENST00000509431 SHHQ15465 462 aa17.36■□□□□ 0.37
HMGCR-208ENST00000509431 APOBEC3HQ6NTF7 200 aaKnown RBP17.36■□□□□ 0.37
HMGCR-208ENST00000509431 TRMT44Q8IYL2 757 aaKnown RBP17.36■□□□□ 0.37
HMGCR-208ENST00000509431 TRIB2Q92519 343 aa17.36■□□□□ 0.37
HMGCR-208ENST00000509431 PICK1Q9NRD5 415 aa17.36■□□□□ 0.37
HMGCR-208ENST00000509431 AGTPBP1Q9UPW5 1226 aa17.36■□□□□ 0.37
HMGCR-208ENST00000509431 HCN4Q9Y3Q4 1203 aa17.36■□□□□ 0.37
HMGCR-208ENST00000509431 ZHX2Q9Y6X8 837 aa17.36■□□□□ 0.37
HMGCR-208ENST00000509431 PIEZO1Q92508 2521 aa17.35■□□□□ 0.37
HMGCR-208ENST00000509431 GCLCP48506 637 aaPredicted RBP17.35■□□□□ 0.37
HMGCR-208ENST00000509431 CASP7P55210 303 aa17.35■□□□□ 0.37
HMGCR-208ENST00000509431 GCKRQ14397 625 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms