RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 RIPK4P57078 832 aa11.27□□□□□ -0.61
COL4A3BP-206ENST00000508809 GRAPQ13588 217 aa11.27□□□□□ -0.61
COL4A3BP-206ENST00000508809 TNIP1Q15025 636 aa11.27□□□□□ -0.61
COL4A3BP-206ENST00000508809 TMC4Q7Z404 712 aa11.27□□□□□ -0.61
COL4A3BP-206ENST00000508809 FAM174AQ8TBP5 190 aa11.27□□□□□ -0.61
COL4A3BP-206ENST00000508809 GRAPLQ8TC17 118 aaPredicted RBP11.27□□□□□ -0.61
COL4A3BP-206ENST00000508809 LRRN4Q8WUT4 740 aa11.27□□□□□ -0.61
COL4A3BP-206ENST00000508809 YDJCA8MPS7 323 aa11.26□□□□□ -0.61
COL4A3BP-206ENST00000508809 TMPOP42166 694 aaKnown RBP11.26□□□□□ -0.61
COL4A3BP-206ENST00000508809 DDX46Q7L014 1031 aaKnown RBP11.26□□□□□ -0.61
COL4A3BP-206ENST00000508809 CDC37L1Q7L3B6 337 aa11.26□□□□□ -0.61
COL4A3BP-206ENST00000508809 XAGE3Q8WTP9 111 aa11.26□□□□□ -0.61
COL4A3BP-206ENST00000508809 GLIS2Q9BZE0 524 aaPredicted RBP11.26□□□□□ -0.61
COL4A3BP-206ENST00000508809 TRMT112Q9UI30 125 aaKnown RBP11.26□□□□□ -0.61
COL4A3BP-206ENST00000508809 CNOT7Q9UIV1 285 aaKnown RBP11.26□□□□□ -0.61
COL4A3BP-206ENST00000508809 SH3TC1Q8TE82 1336 aa11.26□□□□□ -0.61
COL4A3BP-206ENST00000508809 CHL1O00533 1208 aa11.25□□□□□ -0.61
COL4A3BP-206ENST00000508809 RAD17O75943 681 aa11.25□□□□□ -0.61
COL4A3BP-206ENST00000508809 ALDH1A1P00352 501 aa11.25□□□□□ -0.61
COL4A3BP-206ENST00000508809 TRPM4Q8TD43 1214 aa11.25□□□□□ -0.61
COL4A3BP-206ENST00000508809 DPF2Q92785 391 aa11.25□□□□□ -0.61
COL4A3BP-206ENST00000508809 BCL2L13Q9BXK5 485 aa11.25□□□□□ -0.61
COL4A3BP-206ENST00000508809 WASF2Q9Y6W5 498 aa11.25□□□□□ -0.61
COL4A3BP-206ENST00000508809 H7C1D1 291 aa11.24□□□□□ -0.61
COL4A3BP-206ENST00000508809 LMOD3Q0VAK6 560 aa11.24□□□□□ -0.61
COL4A3BP-206ENST00000508809 AIMP1Q12904 312 aaKnown RBP11.24□□□□□ -0.61
COL4A3BP-206ENST00000508809 GRM1Q13255 1194 aa11.24□□□□□ -0.61
COL4A3BP-206ENST00000508809 SF3B3Q15393 1217 aaKnown RBP11.24□□□□□ -0.61
COL4A3BP-206ENST00000508809 LRRC37AA6NMS7 1700 aa11.23□□□□□ -0.61
COL4A3BP-206ENST00000508809 SHTN1A0MZ66 631 aa11.23□□□□□ -0.61
COL4A3BP-206ENST00000508809 APBB1O00213 710 aa11.23□□□□□ -0.61
COL4A3BP-206ENST00000508809 ISCA1Q9BUE6 129 aa11.23□□□□□ -0.61
COL4A3BP-206ENST00000508809 FKBPLQ9UIM3 349 aa11.23□□□□□ -0.61
COL4A3BP-206ENST00000508809 DUOX1Q9NRD9 1551 aa11.23□□□□□ -0.61
COL4A3BP-206ENST00000508809 CCDC85CA6NKD9 419 aa11.22□□□□□ -0.61
COL4A3BP-206ENST00000508809 PSMD14O00487 310 aa11.22□□□□□ -0.61
COL4A3BP-206ENST00000508809 MLLT1Q03111 559 aaPredicted RBP11.22□□□□□ -0.61
COL4A3BP-206ENST00000508809 NOGQ13253 232 aa11.22□□□□□ -0.61
COL4A3BP-206ENST00000508809 TRIM28Q13263 835 aaKnown RBP11.22□□□□□ -0.61
COL4A3BP-206ENST00000508809 RALBP1Q15311 655 aa11.22□□□□□ -0.61
COL4A3BP-206ENST00000508809 NR6A1Q15406 480 aa11.22□□□□□ -0.61
COL4A3BP-206ENST00000508809 KRT24Q2M2I5 525 aa11.22□□□□□ -0.61
COL4A3BP-206ENST00000508809 WASHC4Q2M389 1173 aa11.22□□□□□ -0.61
COL4A3BP-206ENST00000508809 USP48Q86UV5 1035 aa11.22□□□□□ -0.61
COL4A3BP-206ENST00000508809 DDX60Q8IY21 1712 aaKnown RBP11.22□□□□□ -0.61
COL4A3BP-206ENST00000508809 PLBD2Q8NHP8 589 aa11.22□□□□□ -0.61
COL4A3BP-206ENST00000508809 TNRC18O15417 2968 aaPredicted RBP11.22□□□□□ -0.61
COL4A3BP-206ENST00000508809 HOXB7P09629 217 aa11.21□□□□□ -0.61
COL4A3BP-206ENST00000508809 RPS12P25398 132 aaKnown RBP11.21□□□□□ -0.61
COL4A3BP-206ENST00000508809 CTC1Q2NKJ3 1217 aa11.21□□□□□ -0.61
COL4A3BP-206ENST00000508809 CELF1Q92879 486 aaKnown RBP11.21□□□□□ -0.61
COL4A3BP-206ENST00000508809 FOXJ1Q92949 421 aa11.21□□□□□ -0.61
COL4A3BP-206ENST00000508809 FAM89AQ96GI7 184 aa11.21□□□□□ -0.61
COL4A3BP-206ENST00000508809 ZIC5Q96T25 663 aa11.21□□□□□ -0.61
COL4A3BP-206ENST00000508809 MCOLN1Q9GZU1 580 aa11.21□□□□□ -0.61
COL4A3BP-206ENST00000508809 CHPF2Q9P2E5 772 aa11.21□□□□□ -0.61
COL4A3BP-206ENST00000508809 POLLQ9UGP5 575 aa11.21□□□□□ -0.61
COL4A3BP-206ENST00000508809 NSFL1CQ9UNZ2 370 aaKnown RBP11.21□□□□□ -0.61
COL4A3BP-206ENST00000508809 PDE4DIPQ5VU43 2346 aa11.21□□□□□ -0.62
COL4A3BP-206ENST00000508809 FAM155AB1AL88 458 aaPredicted RBP11.2□□□□□ -0.62
COL4A3BP-206ENST00000508809 J3QL48 77 aa11.2□□□□□ -0.62
COL4A3BP-206ENST00000508809 SMPD1P17405 629 aa11.2□□□□□ -0.62
COL4A3BP-206ENST00000508809 HUNKP57058 714 aa11.2□□□□□ -0.62
COL4A3BP-206ENST00000508809 BANK1Q8NDB2 785 aa11.2□□□□□ -0.62
COL4A3BP-206ENST00000508809 ZNF408Q9H9D4 720 aa11.2□□□□□ -0.62
COL4A3BP-206ENST00000508809 KCNQ5Q9NR82 932 aa11.2□□□□□ -0.62
COL4A3BP-206ENST00000508809 DBF4Q9UBU7 674 aaPredicted RBP11.2□□□□□ -0.62
COL4A3BP-206ENST00000508809 MAGEB6P1A0A0J9YX57 407 aa11.19□□□□□ -0.62
COL4A3BP-206ENST00000508809 SIAH2O43255 324 aa11.19□□□□□ -0.62
COL4A3BP-206ENST00000508809 EGFRP00533 1210 aa11.19□□□□□ -0.62
COL4A3BP-206ENST00000508809 VIL1P09327 827 aaKnown RBP11.19□□□□□ -0.62
COL4A3BP-206ENST00000508809 RPS8P62241 208 aaKnown RBP11.19□□□□□ -0.62
COL4A3BP-206ENST00000508809 GPSM2P81274 684 aa11.19□□□□□ -0.62
COL4A3BP-206ENST00000508809 RGMBQ6NW40 437 aa11.19□□□□□ -0.62
COL4A3BP-206ENST00000508809 PDXDC2PQ6P474 469 aa11.19□□□□□ -0.62
COL4A3BP-206ENST00000508809 DLK2Q6UY11 383 aa11.19□□□□□ -0.62
COL4A3BP-206ENST00000508809 KRT26Q7Z3Y9 468 aa11.19□□□□□ -0.62
COL4A3BP-206ENST00000508809 TBC1D16Q8TBP0 767 aa11.19□□□□□ -0.62
COL4A3BP-206ENST00000508809 DBNDD1Q9H9R9 158 aa11.19□□□□□ -0.62
COL4A3BP-206ENST00000508809 PODXL2Q9NZ53 605 aa11.19□□□□□ -0.62
COL4A3BP-206ENST00000508809 SCN9AQ15858 1988 aa11.19□□□□□ -0.62
COL4A3BP-206ENST00000508809 AKAP11Q9UKA4 1901 aa11.19□□□□□ -0.62
COL4A3BP-206ENST00000508809 RTL9Q8NET4 1388 aa11.18□□□□□ -0.62
COL4A3BP-206ENST00000508809 ATP5J2-PTCD1G3V325 749 aa11.18□□□□□ -0.62
COL4A3BP-206ENST00000508809 AXIN1O15169 862 aa11.18□□□□□ -0.62
COL4A3BP-206ENST00000508809 ECE2O60344 883 aa11.18□□□□□ -0.62
COL4A3BP-206ENST00000508809 AVPP01185 164 aa11.18□□□□□ -0.62
COL4A3BP-206ENST00000508809 PTK2Q05397 1052 aa11.18□□□□□ -0.62
COL4A3BP-206ENST00000508809 TBC1D10BQ4KMP7 808 aaPredicted RBP11.18□□□□□ -0.62
COL4A3BP-206ENST00000508809 HDGFL1Q5TGJ6 251 aa11.18□□□□□ -0.62
COL4A3BP-206ENST00000508809 C2orf69Q8N8R5 385 aa11.18□□□□□ -0.62
COL4A3BP-206ENST00000508809 EYA3Q99504 573 aa11.18□□□□□ -0.62
COL4A3BP-206ENST00000508809 ARHGAP9Q9BRR9 750 aa11.18□□□□□ -0.62
COL4A3BP-206ENST00000508809 GBA2Q9HCG7 927 aaPredicted RBP11.18□□□□□ -0.62
COL4A3BP-206ENST00000508809 HYPKQ9NX55 129 aa11.18□□□□□ -0.62
COL4A3BP-206ENST00000508809 SAGE1Q9NXZ1 904 aa11.18□□□□□ -0.62
COL4A3BP-206ENST00000508809 COL4A1P02462 1669 aa11.17□□□□□ -0.62
COL4A3BP-206ENST00000508809 IRS4O14654 1257 aaPredicted RBP11.17□□□□□ -0.62
COL4A3BP-206ENST00000508809 DGKZQ13574 1117 aa11.17□□□□□ -0.62
COL4A3BP-206ENST00000508809 ARID5BQ14865 1188 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms