RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 ZC3H12CQ9C0D7 883 aaKnown RBP7.47□□□□□ -1.21
PDLIM5-211ENST00000508531 LGR6Q9HBX8 967 aa7.47□□□□□ -1.21
PDLIM5-211ENST00000508531 CCDC39Q9UFE4 941 aa7.47□□□□□ -1.21
PDLIM5-211ENST00000508531 PPP1R9AQ9ULJ8 1098 aa7.47□□□□□ -1.21
PDLIM5-211ENST00000508531 TRAK1Q9UPV9 953 aa7.47□□□□□ -1.21
PDLIM5-211ENST00000508531 DAGLAQ9Y4D2 1042 aa7.47□□□□□ -1.21
PDLIM5-211ENST00000508531 LIG1P18858 919 aa7.46□□□□□ -1.22
PDLIM5-211ENST00000508531 LCE3BQ5TA77 95 aa7.46□□□□□ -1.22
PDLIM5-211ENST00000508531 ABI1Q8IZP0 508 aa7.46□□□□□ -1.22
PDLIM5-211ENST00000508531 ALKBH8Q96BT7 664 aaKnown RBP7.46□□□□□ -1.22
PDLIM5-211ENST00000508531 RBCK1Q9BYM8 510 aa7.46□□□□□ -1.22
PDLIM5-211ENST00000508531 GSX1Q9H4S2 264 aaPredicted RBP7.46□□□□□ -1.22
PDLIM5-211ENST00000508531 ADGRE2Q9UHX3 823 aa7.46□□□□□ -1.22
PDLIM5-211ENST00000508531 SOWAHDA6NJG2 315 aa7.45□□□□□ -1.22
PDLIM5-211ENST00000508531 DYNC1LI2O43237 492 aaPredicted RBP7.45□□□□□ -1.22
PDLIM5-211ENST00000508531 PDE4CQ08493 712 aa7.45□□□□□ -1.22
PDLIM5-211ENST00000508531 RPS26P11Q5JNZ5 115 aaPredicted RBP7.45□□□□□ -1.22
PDLIM5-211ENST00000508531 DUSP27Q5VZP5 1158 aa7.45□□□□□ -1.22
PDLIM5-211ENST00000508531 PI16Q6UXB8 463 aa7.45□□□□□ -1.22
PDLIM5-211ENST00000508531 ZNF765Q7L2R6 523 aa7.45□□□□□ -1.22
PDLIM5-211ENST00000508531 WDR89Q96FK6 387 aaPredicted RBP7.45□□□□□ -1.22
PDLIM5-211ENST00000508531 CCDC86Q9H6F5 360 aaKnown RBP7.45□□□□□ -1.22
PDLIM5-211ENST00000508531 LRRC4CQ9HCJ2 640 aa7.45□□□□□ -1.22
PDLIM5-211ENST00000508531 TMPRSS2O15393 492 aa7.44□□□□□ -1.22
PDLIM5-211ENST00000508531 PRNPP04156 253 aa7.44□□□□□ -1.22
PDLIM5-211ENST00000508531 FCGRTP55899 365 aa7.44□□□□□ -1.22
PDLIM5-211ENST00000508531 SEZ6L2Q6UXD5 910 aa7.44□□□□□ -1.22
PDLIM5-211ENST00000508531 DTHD1Q6ZMT9 781 aa7.44□□□□□ -1.22
PDLIM5-211ENST00000508531 VSIG10LQ86VR7 867 aa7.44□□□□□ -1.22
PDLIM5-211ENST00000508531 KRTAP19-1Q8IUB9 90 aa7.44□□□□□ -1.22
PDLIM5-211ENST00000508531 GOLGA2P5Q9HBQ8 144 aa7.44□□□□□ -1.22
PDLIM5-211ENST00000508531 C1GALT1Q9NS00 363 aa7.44□□□□□ -1.22
PDLIM5-211ENST00000508531 BIN2Q9UBW5 565 aaPredicted RBP7.44□□□□□ -1.22
PDLIM5-211ENST00000508531 GPN3Q9UHW5 284 aaPredicted RBP7.44□□□□□ -1.22
PDLIM5-211ENST00000508531 TTBK1Q5TCY1 1321 aaPredicted RBP7.44□□□□□ -1.22
PDLIM5-211ENST00000508531 CC2D2AQ9P2K1 1620 aa7.43□□□□□ -1.22
PDLIM5-211ENST00000508531 ZNF862O60290 1169 aa7.43□□□□□ -1.22
PDLIM5-211ENST00000508531 CYP27A1Q02318 531 aa7.43□□□□□ -1.22
PDLIM5-211ENST00000508531 NFXL1Q6ZNB6 911 aa7.43□□□□□ -1.22
PDLIM5-211ENST00000508531 TMC7Q7Z402 723 aa7.43□□□□□ -1.22
PDLIM5-211ENST00000508531 TP53INP2Q8IXH6 220 aa7.43□□□□□ -1.22
PDLIM5-211ENST00000508531 FMNL2Q96PY5 1086 aa7.43□□□□□ -1.22
PDLIM5-211ENST00000508531 BSDC1Q9NW68 430 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-211ENST00000508531 ZC3H7BQ9UGR2 993 aaKnown RBP7.43□□□□□ -1.22
PDLIM5-211ENST00000508531 NACADO15069 1562 aa7.42□□□□□ -1.22
PDLIM5-211ENST00000508531 BICRAQ9NZM4 1560 aa7.42□□□□□ -1.22
PDLIM5-211ENST00000508531 UNC13AQ9UPW8 1703 aa7.42□□□□□ -1.22
PDLIM5-211ENST00000508531 TXKP42681 527 aa7.42□□□□□ -1.22
PDLIM5-211ENST00000508531 NLRP2Q9NX02 1062 aa7.42□□□□□ -1.22
PDLIM5-211ENST00000508531 CRIM1Q9NZV1 1036 aa7.42□□□□□ -1.22
PDLIM5-211ENST00000508531 RNF114Q9Y508 228 aa7.42□□□□□ -1.22
PDLIM5-211ENST00000508531 SYNGAP1Q96PV0 1343 aa7.42□□□□□ -1.22
PDLIM5-211ENST00000508531 GSTP1P09211 210 aaKnown RBP7.41□□□□□ -1.22
PDLIM5-211ENST00000508531 ID3Q02535 119 aa7.41□□□□□ -1.22
PDLIM5-211ENST00000508531 FLCNQ8NFG4 579 aa7.41□□□□□ -1.22
PDLIM5-211ENST00000508531 FBXL18Q96ME1 805 aa7.41□□□□□ -1.22
PDLIM5-211ENST00000508531 FANCD2OSQ96PS1 177 aa7.41□□□□□ -1.22
PDLIM5-211ENST00000508531 BCO2Q9BYV7 579 aa7.41□□□□□ -1.22
PDLIM5-211ENST00000508531 PIDD1Q9HB75 910 aa7.41□□□□□ -1.22
PDLIM5-211ENST00000508531 DCTN4Q9UJW0 460 aa7.41□□□□□ -1.22
PDLIM5-211ENST00000508531 SLFN14P0C7P3 912 aa7.4□□□□□ -1.22
PDLIM5-211ENST00000508531 OGFOD3Q6PK18 319 aa7.4□□□□□ -1.22
PDLIM5-211ENST00000508531 ATXN3LQ9H3M9 355 aa7.4□□□□□ -1.22
PDLIM5-211ENST00000508531 TMEM39AQ9NV64 488 aa7.4□□□□□ -1.22
PDLIM5-211ENST00000508531 PPP4R2Q9NY27 417 aa7.4□□□□□ -1.22
PDLIM5-211ENST00000508531 PNMA6FA0A0J9YX94 578 aa7.39□□□□□ -1.23
PDLIM5-211ENST00000508531 MAPK1P28482 360 aa7.39□□□□□ -1.23
PDLIM5-211ENST00000508531 PPP2R3AQ06190 1150 aa7.39□□□□□ -1.23
PDLIM5-211ENST00000508531 CDK5R2Q13319 367 aa7.39□□□□□ -1.23
PDLIM5-211ENST00000508531 KIF4BQ2VIQ3 1234 aa7.39□□□□□ -1.23
PDLIM5-211ENST00000508531 KCNB2Q92953 911 aa7.39□□□□□ -1.23
PDLIM5-211ENST00000508531 KRT82Q9NSB4 513 aa7.39□□□□□ -1.23
PDLIM5-211ENST00000508531 AKAP2Q9Y2D5 859 aa7.39□□□□□ -1.23
PDLIM5-211ENST00000508531 PCDHGC5Q9Y5F6 944 aa7.39□□□□□ -1.23
PDLIM5-211ENST00000508531 TTLL4Q14679 1199 aa7.38□□□□□ -1.23
PDLIM5-211ENST00000508531 COL19A1Q14993 1142 aa7.38□□□□□ -1.23
PDLIM5-211ENST00000508531 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.38□□□□□ -1.23
PDLIM5-211ENST00000508531 NXPE4Q6UWF7 544 aa7.38□□□□□ -1.23
PDLIM5-211ENST00000508531 PDZD3Q86UT5 571 aa7.38□□□□□ -1.23
PDLIM5-211ENST00000508531 SULF2Q8IWU5 870 aa7.38□□□□□ -1.23
PDLIM5-211ENST00000508531 SMYD4Q8IYR2 804 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-211ENST00000508531 STK35Q8TDR2 534 aa7.38□□□□□ -1.23
PDLIM5-211ENST00000508531 DISC1Q9NRI5 854 aa7.38□□□□□ -1.23
PDLIM5-211ENST00000508531 GNEQ9Y223 722 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-211ENST00000508531 RNGTTO60942 597 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-211ENST00000508531 FAM87AP0C7U9 286 aa7.37□□□□□ -1.23
PDLIM5-211ENST00000508531 HNRNPUQ00839 825 aaKnown RBP eCLIP7.37□□□□□ -1.23
PDLIM5-211ENST00000508531 PLCB3Q01970 1234 aa7.37□□□□□ -1.23
PDLIM5-211ENST00000508531 DSC3Q14574 896 aa7.37□□□□□ -1.23
PDLIM5-211ENST00000508531 CYP27C1Q4G0S4 372 aa7.37□□□□□ -1.23
PDLIM5-211ENST00000508531 CBLL1Q75N03 491 aa7.37□□□□□ -1.23
PDLIM5-211ENST00000508531 ERICH6Q7L0X2 663 aa7.37□□□□□ -1.23
PDLIM5-211ENST00000508531 PAK6Q9NQU5 681 aaPredicted RBP7.37□□□□□ -1.23
PDLIM5-211ENST00000508531 BRD1O95696 1058 aa7.36□□□□□ -1.23
PDLIM5-211ENST00000508531 XRCC5P13010 732 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-211ENST00000508531 HCLS1P14317 486 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-211ENST00000508531 ENOX2Q16206 610 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-211ENST00000508531 ZNF574Q6ZN55 896 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-211ENST00000508531 TREHO43280 583 aa7.35□□□□□ -1.23
PDLIM5-211ENST00000508531 MAP1SQ66K74 1059 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms