RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 WEE1P30291 646 aa8.84□□□□□ -0.99
PDGFRA-206ENST00000508170 KIF5BP33176 963 aa8.84□□□□□ -0.99
PDGFRA-206ENST00000508170 PLA2G4AP47712 749 aa8.84□□□□□ -0.99
PDGFRA-206ENST00000508170 TRPC1P48995 793 aa8.84□□□□□ -0.99
PDGFRA-206ENST00000508170 PTPN14Q15678 1187 aa8.84□□□□□ -0.99
PDGFRA-206ENST00000508170 ELF2Q15723 593 aa8.84□□□□□ -0.99
PDGFRA-206ENST00000508170 ZC3H12BQ5HYM0 836 aaKnown RBP8.84□□□□□ -0.99
PDGFRA-206ENST00000508170 CCDC129Q6ZRS4 1044 aa8.84□□□□□ -0.99
PDGFRA-206ENST00000508170 GIMAP8Q8ND71 665 aaPredicted RBP8.84□□□□□ -0.99
PDGFRA-206ENST00000508170 IL17REQ8NFR9 667 aa8.84□□□□□ -0.99
PDGFRA-206ENST00000508170 USP33Q8TEY7 942 aa8.84□□□□□ -0.99
PDGFRA-206ENST00000508170 THAP3Q8WTV1 239 aaPredicted RBP8.84□□□□□ -0.99
PDGFRA-206ENST00000508170 TAF4BQ92750 862 aa8.84□□□□□ -0.99
PDGFRA-206ENST00000508170 GJA10Q969M2 543 aa8.84□□□□□ -0.99
PDGFRA-206ENST00000508170 SPON2Q9BUD6 331 aa8.84□□□□□ -0.99
PDGFRA-206ENST00000508170 STRN4Q9NRL3 753 aa8.84□□□□□ -0.99
PDGFRA-206ENST00000508170 GINM1Q9NU53 330 aa8.84□□□□□ -0.99
PDGFRA-206ENST00000508170 FAM50BQ9Y247 325 aa8.84□□□□□ -0.99
PDGFRA-206ENST00000508170 E2F8A0AVK6 867 aa8.83□□□□□ -1
PDGFRA-206ENST00000508170 PFKPQ01813 784 aa8.83□□□□□ -1
PDGFRA-206ENST00000508170 SATB1Q01826 763 aa8.83□□□□□ -1
PDGFRA-206ENST00000508170 RASGRF1Q13972 1273 aa8.83□□□□□ -1
PDGFRA-206ENST00000508170 KIF22Q14807 665 aa8.83□□□□□ -1
PDGFRA-206ENST00000508170 XRRA1Q6P2D8 792 aa8.83□□□□□ -1
PDGFRA-206ENST00000508170 OTOP3Q7RTS5 596 aa8.83□□□□□ -1
PDGFRA-206ENST00000508170 SULF1Q8IWU6 871 aa8.83□□□□□ -1
PDGFRA-206ENST00000508170 NKAPQ8N5F7 415 aaKnown RBP8.83□□□□□ -1
PDGFRA-206ENST00000508170 HLA-CQ95604 372 aa8.83□□□□□ -1
PDGFRA-206ENST00000508170 HINFPQ9BQA5 517 aa8.83□□□□□ -1
PDGFRA-206ENST00000508170 YIPF4Q9BSR8 244 aa8.83□□□□□ -1
PDGFRA-206ENST00000508170 ST7Q9NRC1 585 aa8.83□□□□□ -1
PDGFRA-206ENST00000508170 PER1O15534 1290 aaPredicted RBP8.82□□□□□ -1
PDGFRA-206ENST00000508170 ZNF280AP59817 542 aaPredicted RBP8.82□□□□□ -1
PDGFRA-206ENST00000508170 COBLL1Q53SF7 1204 aa8.82□□□□□ -1
PDGFRA-206ENST00000508170 AGAP9Q5VTM2 703 aa8.82□□□□□ -1
PDGFRA-206ENST00000508170 TAF3Q5VWG9 929 aa8.82□□□□□ -1
PDGFRA-206ENST00000508170 SPDYE1Q8NFV5 336 aaPredicted RBP8.82□□□□□ -1
PDGFRA-206ENST00000508170 SMC4Q9NTJ3 1288 aa8.82□□□□□ -1
PDGFRA-206ENST00000508170 RBM28Q9NW13 759 aaKnown RBP8.82□□□□□ -1
PDGFRA-206ENST00000508170 TMX2Q9Y320 296 aa8.82□□□□□ -1
PDGFRA-206ENST00000508170 AFG3L2Q9Y4W6 797 aa8.82□□□□□ -1
PDGFRA-206ENST00000508170 SMARCA4P51532 1647 aa8.82□□□□□ -1
PDGFRA-206ENST00000508170 ANO9A1A5B4 782 aa8.82□□□□□ -1
PDGFRA-206ENST00000508170 C2orf72A6NCS6 295 aa8.82□□□□□ -1
PDGFRA-206ENST00000508170 PRSS12P56730 875 aa8.82□□□□□ -1
PDGFRA-206ENST00000508170 UNC5DQ6UXZ4 953 aa8.82□□□□□ -1
PDGFRA-206ENST00000508170 PASD1Q8IV76 773 aa8.82□□□□□ -1
PDGFRA-206ENST00000508170 PHTF2Q8N3S3 785 aa8.82□□□□□ -1
PDGFRA-206ENST00000508170 PARD3BQ8TEW8 1205 aa8.82□□□□□ -1
PDGFRA-206ENST00000508170 CHMP4CQ96CF2 233 aa8.82□□□□□ -1
PDGFRA-206ENST00000508170 PRDM11Q9NQV5 511 aa8.82□□□□□ -1
PDGFRA-206ENST00000508170 STRIP2Q9ULQ0 834 aa8.82□□□□□ -1
PDGFRA-206ENST00000508170 CLEC11AQ9Y240 323 aa8.82□□□□□ -1
PDGFRA-206ENST00000508170 TOP2AP11388 1531 aaKnown RBP8.82□□□□□ -1
PDGFRA-206ENST00000508170 H0Y3Z8 333 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 HTATSF1O43719 755 aaKnown RBP8.81□□□□□ -1
PDGFRA-206ENST00000508170 KIF5CO60282 957 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 TMCC2O75069 709 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 SETSIPP0DME0 302 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 CAPN3P20807 821 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 EIF4BP23588 611 aaKnown RBP8.81□□□□□ -1
PDGFRA-206ENST00000508170 EIF1AXP47813 144 aaKnown RBP8.81□□□□□ -1
PDGFRA-206ENST00000508170 ITKQ08881 620 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 PPP2R5CQ13362 524 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 DDR2Q16832 855 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 AKAP4Q5JQC9 854 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 CCDC102BQ68D86 513 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 CDCA2Q69YH5 1023 aaPredicted RBP8.81□□□□□ -1
PDGFRA-206ENST00000508170 WWC2Q6AWC2 1192 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 PLBD1Q6P4A8 553 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 ZBTB46Q86UZ6 589 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 JMYQ8N9B5 988 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 NINJ1Q92982 152 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 FAM210AQ96ND0 272 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 SUDS3Q9H7L9 328 aaPredicted RBP8.81□□□□□ -1
PDGFRA-206ENST00000508170 PRKRIP1Q9H875 184 aaPredicted RBP8.81□□□□□ -1
PDGFRA-206ENST00000508170 STK26Q9P289 416 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 ERBB4Q15303 1308 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 TMEM110-MUSTN1A8MSY1 372 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 TNFRSF21O75509 655 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 CAP2P40123 477 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 ECE1P42892 770 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 TBX2Q13207 712 aaPredicted RBP8.81□□□□□ -1
PDGFRA-206ENST00000508170 GRM1Q13255 1194 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 KRT72Q14CN4 511 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 TRAF7Q6Q0C0 670 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 IGF2-ASQ6U949 168 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 OTUD6AQ7L8S5 288 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 IQCF2Q8IXL9 164 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 SYNPOQ8N3V7 929 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 NGEFQ8N5V2 710 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 ZNF454Q8N9F8 522 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 N4BP2L2Q92802 583 aaPredicted RBP8.81□□□□□ -1
PDGFRA-206ENST00000508170 ATP6V1E2Q96A05 226 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 BLOC1S4Q9NUP1 217 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 TPCN1Q9ULQ1 816 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 DMTF1Q9Y222 760 aa8.81□□□□□ -1
PDGFRA-206ENST00000508170 IQCA1LA6NCM1 817 aa8.8□□□□□ -1
PDGFRA-206ENST00000508170 RFPL1O75677 317 aa8.8□□□□□ -1
PDGFRA-206ENST00000508170 ZSCAN20P17040 1043 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms