RNA–Protein interactions for RNA: ENST00000508049.1

CLOCK-207, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-207ENST00000508049 NPHS2Q9NP85 383 aa7.31□□□□□ -1.24
CLOCK-207ENST00000508049 EGFL7Q9UHF1 273 aa7.31□□□□□ -1.24
CLOCK-207ENST00000508049 H3BRB1 525 aa7.3□□□□□ -1.24
CLOCK-207ENST00000508049 CPNE3O75131 537 aaKnown RBP7.3□□□□□ -1.24
CLOCK-207ENST00000508049 AP3B2Q13367 1082 aa7.3□□□□□ -1.24
CLOCK-207ENST00000508049 PLCL1Q15111 1095 aa7.3□□□□□ -1.24
CLOCK-207ENST00000508049 CYP27C1Q4G0S4 372 aa7.3□□□□□ -1.24
CLOCK-207ENST00000508049 ZNF574Q6ZN55 896 aaPredicted RBP7.3□□□□□ -1.24
CLOCK-207ENST00000508049 TUT1Q9H6E5 874 aaKnown RBP7.3□□□□□ -1.24
CLOCK-207ENST00000508049 NDUFB5O43674 189 aa7.29□□□□□ -1.24
CLOCK-207ENST00000508049 C8AP07357 584 aa7.29□□□□□ -1.24
CLOCK-207ENST00000508049 LIG1P18858 919 aa7.29□□□□□ -1.24
CLOCK-207ENST00000508049 ZNF157P51786 506 aaPredicted RBP7.29□□□□□ -1.24
CLOCK-207ENST00000508049 PDE3BQ13370 1112 aa7.29□□□□□ -1.24
CLOCK-207ENST00000508049 STK11IPQ8N1F8 1099 aa7.29□□□□□ -1.24
CLOCK-207ENST00000508049 ZC3H12CQ9C0D7 883 aaKnown RBP7.29□□□□□ -1.24
CLOCK-207ENST00000508049 TMPRSS2O15393 492 aa7.28□□□□□ -1.24
CLOCK-207ENST00000508049 SERPINB4P48594 390 aa7.28□□□□□ -1.24
CLOCK-207ENST00000508049 JAG1P78504 1218 aa7.28□□□□□ -1.24
CLOCK-207ENST00000508049 PTPN12Q05209 780 aaKnown RBP7.28□□□□□ -1.24
CLOCK-207ENST00000508049 BNIP3Q12983 259 aa7.28□□□□□ -1.24
CLOCK-207ENST00000508049 CDK5R2Q13319 367 aa7.28□□□□□ -1.24
CLOCK-207ENST00000508049 SPRED2Q7Z698 418 aa7.28□□□□□ -1.24
CLOCK-207ENST00000508049 PIDD1Q9HB75 910 aa7.28□□□□□ -1.24
CLOCK-207ENST00000508049 SYNGAP1Q96PV0 1343 aa7.27□□□□□ -1.24
CLOCK-207ENST00000508049 GADD45BO75293 160 aaPredicted RBP7.27□□□□□ -1.25
CLOCK-207ENST00000508049 SLFN14P0C7P3 912 aa7.27□□□□□ -1.25
CLOCK-207ENST00000508049 ECM1Q16610 540 aa7.27□□□□□ -1.25
CLOCK-207ENST00000508049 ZNF792Q3KQV3 632 aa7.27□□□□□ -1.25
CLOCK-207ENST00000508049 WDR89Q96FK6 387 aaPredicted RBP7.27□□□□□ -1.25
CLOCK-207ENST00000508049 CCDC86Q9H6F5 360 aaKnown RBP7.27□□□□□ -1.25
CLOCK-207ENST00000508049 ABCB6Q9NP58 842 aa7.27□□□□□ -1.25
CLOCK-207ENST00000508049 CRIM1Q9NZV1 1036 aa7.27□□□□□ -1.25
CLOCK-207ENST00000508049 TMEM238LA0A1B0GVL6 79 aa7.26□□□□□ -1.25
CLOCK-207ENST00000508049 BIN1O00499 593 aa7.26□□□□□ -1.25
CLOCK-207ENST00000508049 PAPLNO95428 1278 aa7.26□□□□□ -1.25
CLOCK-207ENST00000508049 FAM87AP0C7U9 286 aa7.26□□□□□ -1.25
CLOCK-207ENST00000508049 ARHGAP4P98171 946 aa7.26□□□□□ -1.25
CLOCK-207ENST00000508049 RPS26P11Q5JNZ5 115 aaPredicted RBP7.26□□□□□ -1.25
CLOCK-207ENST00000508049 B4GALNT3Q6L9W6 998 aa7.26□□□□□ -1.25
CLOCK-207ENST00000508049 WFDC3Q8IUB2 231 aa7.26□□□□□ -1.25
CLOCK-207ENST00000508049 PLD6Q8N2A8 252 aaKnown RBP7.26□□□□□ -1.25
CLOCK-207ENST00000508049 CCDC74AQ96AQ1 378 aa7.26□□□□□ -1.25
CLOCK-207ENST00000508049 MISP3Q96FF7 219 aa7.26□□□□□ -1.25
CLOCK-207ENST00000508049 FAM129BQ96TA1 746 aa7.26□□□□□ -1.25
CLOCK-207ENST00000508049 ATXN3LQ9H3M9 355 aa7.26□□□□□ -1.25
CLOCK-207ENST00000508049 C1orf115Q9H7X2 142 aa7.26□□□□□ -1.25
CLOCK-207ENST00000508049 EIF1AYO14602 144 aaKnown RBP7.25□□□□□ -1.25
CLOCK-207ENST00000508049 ID3Q02535 119 aa7.25□□□□□ -1.25
CLOCK-207ENST00000508049 PRPF40BQ6NWY9 871 aaKnown RBP7.25□□□□□ -1.25
CLOCK-207ENST00000508049 FAM181AQ8N9Y4 354 aa7.25□□□□□ -1.25
CLOCK-207ENST00000508049 NETO1Q8TDF5 533 aa7.25□□□□□ -1.25
CLOCK-207ENST00000508049 TMC1Q8TDI8 760 aa7.25□□□□□ -1.25
CLOCK-207ENST00000508049 FANCD2OSQ96PS1 177 aa7.25□□□□□ -1.25
CLOCK-207ENST00000508049 ZNF862O60290 1169 aa7.24□□□□□ -1.25
CLOCK-207ENST00000508049 RNGTTO60942 597 aaKnown RBP7.24□□□□□ -1.25
CLOCK-207ENST00000508049 FAAP100Q0VG06 881 aa7.24□□□□□ -1.25
CLOCK-207ENST00000508049 SMYD4Q8IYR2 804 aaPredicted RBP7.24□□□□□ -1.25
CLOCK-207ENST00000508049 CITED4Q96RK1 184 aa7.24□□□□□ -1.25
CLOCK-207ENST00000508049 NIF3L1Q9GZT8 377 aa7.24□□□□□ -1.25
CLOCK-207ENST00000508049 DNAJC25Q9H1X3 360 aa7.24□□□□□ -1.25
CLOCK-207ENST00000508049 TRAK1Q9UPV9 953 aa7.24□□□□□ -1.25
CLOCK-207ENST00000508049 CD8BP10966 210 aa7.23□□□□□ -1.25
CLOCK-207ENST00000508049 HNRNPUQ00839 825 aaKnown RBP eCLIP7.23□□□□□ -1.25
CLOCK-207ENST00000508049 LCE1DQ5T752 114 aa7.23□□□□□ -1.25
CLOCK-207ENST00000508049 DISC1Q9NRI5 854 aa7.23□□□□□ -1.25
CLOCK-207ENST00000508049 USTQ9Y2C2 406 aa7.23□□□□□ -1.25
CLOCK-207ENST00000508049 GSTP1P09211 210 aaKnown RBP7.22□□□□□ -1.25
CLOCK-207ENST00000508049 GRM2Q14416 872 aa7.22□□□□□ -1.25
CLOCK-207ENST00000508049 TTLL4Q14679 1199 aa7.22□□□□□ -1.25
CLOCK-207ENST00000508049 KIF4BQ2VIQ3 1234 aa7.22□□□□□ -1.25
CLOCK-207ENST00000508049 ZNF648Q5T619 568 aaPredicted RBP7.22□□□□□ -1.25
CLOCK-207ENST00000508049 DTHD1Q6ZMT9 781 aa7.22□□□□□ -1.25
CLOCK-207ENST00000508049 ARHGAP27Q6ZUM4 889 aa7.22□□□□□ -1.25
CLOCK-207ENST00000508049 RC3H2Q9HBD1 1191 aaKnown RBP7.22□□□□□ -1.25
CLOCK-207ENST00000508049 KRT82Q9NSB4 513 aa7.22□□□□□ -1.25
CLOCK-207ENST00000508049 GPN3Q9UHW5 284 aaPredicted RBP7.22□□□□□ -1.25
CLOCK-207ENST00000508049 VAV3Q9UKW4 847 aa7.22□□□□□ -1.25
CLOCK-207ENST00000508049 CARMIL2Q6F5E8 1435 aa7.21□□□□□ -1.25
CLOCK-207ENST00000508049 GPR182O15218 404 aa7.21□□□□□ -1.26
CLOCK-207ENST00000508049 LEFTY1O75610 366 aa7.21□□□□□ -1.26
CLOCK-207ENST00000508049 HCLS1P14317 486 aaPredicted RBP7.21□□□□□ -1.26
CLOCK-207ENST00000508049 FUT4P22083 530 aa7.21□□□□□ -1.26
CLOCK-207ENST00000508049 PRKCQQ04759 706 aa7.21□□□□□ -1.26
CLOCK-207ENST00000508049 GLIS3Q8NEA6 775 aa7.21□□□□□ -1.26
CLOCK-207ENST00000508049 EPS8L3Q8TE67 593 aaKnown RBP7.21□□□□□ -1.26
CLOCK-207ENST00000508049 KCNB2Q92953 911 aa7.21□□□□□ -1.26
CLOCK-207ENST00000508049 SSU72Q9NP77 194 aaKnown RBP7.21□□□□□ -1.26
CLOCK-207ENST00000508049 PCOLCE2Q9UKZ9 415 aa7.21□□□□□ -1.26
CLOCK-207ENST00000508049 GTF3C3Q9Y5Q9 886 aa7.21□□□□□ -1.26
CLOCK-207ENST00000508049 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.21□□□□□ -1.26
CLOCK-207ENST00000508049 RNASE1P07998 156 aaKnown RBP7.2□□□□□ -1.26
CLOCK-207ENST00000508049 CD96P40200 585 aa7.2□□□□□ -1.26
CLOCK-207ENST00000508049 PPP2R3AQ06190 1150 aa7.2□□□□□ -1.26
CLOCK-207ENST00000508049 ATG4DQ86TL0 474 aaPredicted RBP7.2□□□□□ -1.26
CLOCK-207ENST00000508049 PI4K2BQ8TCG2 481 aa7.2□□□□□ -1.26
CLOCK-207ENST00000508049 CSRNP1Q96S65 589 aa7.2□□□□□ -1.26
CLOCK-207ENST00000508049 MBNL3Q9NUK0 354 aaKnown RBP7.2□□□□□ -1.26
CLOCK-207ENST00000508049 PCDHGC5Q9Y5F6 944 aa7.2□□□□□ -1.26
CLOCK-207ENST00000508049 U3KQE9 123 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms