RNA–Protein interactions for RNA: ENST00000507996.5

KDM3B-204, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 3,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-204ENST00000507996 PARP3Q9Y6F1 533 aa7.06□□□□□ -1.28
KDM3B-204ENST00000507996 TUBB4BP68371 445 aa7.06□□□□□ -1.28
KDM3B-204ENST00000507996 FAM196AQ6ZSG2 479 aa7.06□□□□□ -1.28
KDM3B-204ENST00000507996 NBPF5PQ86XG9 351 aaPredicted RBP7.06□□□□□ -1.28
KDM3B-204ENST00000507996 LINS1Q8NG48 757 aa7.06□□□□□ -1.28
KDM3B-204ENST00000507996 FAM71BQ8TC56 605 aa7.06□□□□□ -1.28
KDM3B-204ENST00000507996 PLCD4Q9BRC7 762 aa7.06□□□□□ -1.28
KDM3B-204ENST00000507996 AOX1Q06278 1338 aa7.06□□□□□ -1.28
KDM3B-204ENST00000507996 A0A087WZG4 1122 aa7.06□□□□□ -1.28
KDM3B-204ENST00000507996 EVCP57679 992 aa7.06□□□□□ -1.28
KDM3B-204ENST00000507996 DNM1Q05193 864 aaKnown RBP7.06□□□□□ -1.28
KDM3B-204ENST00000507996 ARID5BQ14865 1188 aa7.06□□□□□ -1.28
KDM3B-204ENST00000507996 LONRF2Q1L5Z9 754 aa7.06□□□□□ -1.28
KDM3B-204ENST00000507996 CEP85Q6P2H3 762 aa7.06□□□□□ -1.28
KDM3B-204ENST00000507996 FOXR1Q6PIV2 292 aa7.06□□□□□ -1.28
KDM3B-204ENST00000507996 DZIP3Q86Y13 1208 aaKnown RBP7.06□□□□□ -1.28
KDM3B-204ENST00000507996 NUTM1Q86Y26 1132 aa7.06□□□□□ -1.28
KDM3B-204ENST00000507996 PRPF38AQ8NAV1 312 aaKnown RBP7.06□□□□□ -1.28
KDM3B-204ENST00000507996 KAT2BQ92831 832 aa7.06□□□□□ -1.28
KDM3B-204ENST00000507996 MPHOSPH8Q99549 860 aa7.06□□□□□ -1.28
KDM3B-204ENST00000507996 CCDC87Q9NVE4 849 aa7.06□□□□□ -1.28
KDM3B-204ENST00000507996 RAB21Q9UL25 225 aa7.06□□□□□ -1.28
KDM3B-204ENST00000507996 CHMP3Q9Y3E7 222 aa7.06□□□□□ -1.28
KDM3B-204ENST00000507996 CACNA1FO60840 1977 aa7.06□□□□□ -1.28
KDM3B-204ENST00000507996 NEURL1BA8MQ27 555 aa7.05□□□□□ -1.28
KDM3B-204ENST00000507996 POTEB2H3BUK9 544 aa7.05□□□□□ -1.28
KDM3B-204ENST00000507996 SHOX2O60902 331 aaPredicted RBP7.05□□□□□ -1.28
KDM3B-204ENST00000507996 ERLIN2O94905 339 aa7.05□□□□□ -1.28
KDM3B-204ENST00000507996 MRPL12P52815 198 aaKnown RBP7.05□□□□□ -1.28
KDM3B-204ENST00000507996 MAP3K9P80192 1104 aa7.05□□□□□ -1.28
KDM3B-204ENST00000507996 C1QBPQ07021 282 aaKnown RBP7.05□□□□□ -1.28
KDM3B-204ENST00000507996 SEMA3FQ13275 785 aa7.05□□□□□ -1.28
KDM3B-204ENST00000507996 HLFQ16534 295 aa7.05□□□□□ -1.28
KDM3B-204ENST00000507996 UBE3BQ7Z3V4 1068 aa7.05□□□□□ -1.28
KDM3B-204ENST00000507996 TTC6Q86TZ1 520 aa7.05□□□□□ -1.28
KDM3B-204ENST00000507996 POTEDQ86YR6 584 aa7.05□□□□□ -1.28
KDM3B-204ENST00000507996 C16orf71Q8IYS4 520 aaPredicted RBP7.05□□□□□ -1.28
KDM3B-204ENST00000507996 XAGE2Q96GT9 111 aa7.05□□□□□ -1.28
KDM3B-204ENST00000507996 AKAP2Q9Y2D5 859 aa7.05□□□□□ -1.28
KDM3B-204ENST00000507996 PNMA6EA0A0J9YXQ4 647 aa7.05□□□□□ -1.28
KDM3B-204ENST00000507996 GRM8O00222 908 aa7.05□□□□□ -1.28
KDM3B-204ENST00000507996 CTAGE5O15320 804 aa7.05□□□□□ -1.28
KDM3B-204ENST00000507996 EIF3JO75822 258 aaKnown RBP7.05□□□□□ -1.28
KDM3B-204ENST00000507996 KRT85P78386 507 aa7.05□□□□□ -1.28
KDM3B-204ENST00000507996 ICA1Q05084 483 aa7.05□□□□□ -1.28
KDM3B-204ENST00000507996 NEDD9Q14511 834 aa7.05□□□□□ -1.28
KDM3B-204ENST00000507996 LINC00116Q8NCU8 138 aa7.05□□□□□ -1.28
KDM3B-204ENST00000507996 OTUD7AQ8TE49 926 aaPredicted RBP7.05□□□□□ -1.28
KDM3B-204ENST00000507996 TRMT1Q9NXH9 659 aaKnown RBP7.05□□□□□ -1.28
KDM3B-204ENST00000507996 LIMCH1Q9UPQ0 1083 aa7.05□□□□□ -1.28
KDM3B-204ENST00000507996 UBR2Q8IWV8 1755 aa7.05□□□□□ -1.28
KDM3B-204ENST00000507996 BRWD3Q6RI45 1802 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 ALDH1L1O75891 902 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 CLSTN1O94985 981 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 GCFC2P16383 781 aaKnown RBP7.04□□□□□ -1.28
KDM3B-204ENST00000507996 ELF1P32519 619 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 PDE1AP54750 535 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 GCKRQ14397 625 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 CRYMQ14894 314 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 STX1AQ16623 288 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 VPS53Q5VIR6 699 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 INTS5Q6P9B9 1019 aaKnown RBP7.04□□□□□ -1.28
KDM3B-204ENST00000507996 HDXQ7Z353 690 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 FMNL3Q8IVF7 1028 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 MSANTD4Q8NCY6 345 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 DDX11Q96FC9 970 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 CCDC85AQ96PX6 553 aaPredicted RBP7.04□□□□□ -1.28
KDM3B-204ENST00000507996 SCAND2PQ9GZW5 306 aaPredicted RBP7.04□□□□□ -1.28
KDM3B-204ENST00000507996 NBPF3Q9H094 633 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.04□□□□□ -1.28
KDM3B-204ENST00000507996 THSD7AQ9UPZ6 1657 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 PAPPAQ13219 1627 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 GNPATO15228 680 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 HMMRO75330 724 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 APBA3O96018 575 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 CHMLP26374 656 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 TXLNAP40222 546 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 GRIK3Q13003 919 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 PPP2R5AQ15172 486 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 PREPLQ4J6C6 727 aaPredicted RBP7.04□□□□□ -1.28
KDM3B-204ENST00000507996 WLSQ5T9L3 541 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 BICDL1Q6ZP65 573 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 FAM43BQ6ZT52 329 aaPredicted RBP7.04□□□□□ -1.28
KDM3B-204ENST00000507996 PPP1R42Q7Z4L9 355 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 DHX40Q8IX18 779 aaKnown RBP7.04□□□□□ -1.28
KDM3B-204ENST00000507996 TEX11Q8IYF3 940 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 CCDC34Q96HJ3 373 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 SUCLG2Q96I99 432 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 BPIFA3Q9BQP9 254 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 PARD6BQ9BYG5 372 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 SMC3Q9UQE7 1217 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 MRFAP1Q9Y605 127 aa7.04□□□□□ -1.28
KDM3B-204ENST00000507996 GOLGA6L19H0YKK7 550 aa7.03□□□□□ -1.28
KDM3B-204ENST00000507996 FANCGO15287 622 aa7.03□□□□□ -1.28
KDM3B-204ENST00000507996 IL6STP40189 918 aaPredicted RBP7.03□□□□□ -1.28
KDM3B-204ENST00000507996 SF3B2Q13435 895 aaKnown RBP7.03□□□□□ -1.28
KDM3B-204ENST00000507996 BEND6Q5SZJ8 279 aaPredicted RBP7.03□□□□□ -1.28
KDM3B-204ENST00000507996 TTLL5Q6EMB2 1281 aa7.03□□□□□ -1.28
KDM3B-204ENST00000507996 TATDN2Q93075 761 aa7.03□□□□□ -1.28
KDM3B-204ENST00000507996 ZSCAN31Q96LW9 406 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms