RNA–Protein interactions for RNA: ENST00000507653.1

AC008539.1-201, humanhuman

TSL 3 BASIC

Gene AC008539.1, Length 482 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008539.1-201ENST00000507653 SOX17Q9H6I2 414 aaPredicted RBP5.84□□□□□ -1.47
AC008539.1-201ENST00000507653 ANO2Q9NQ90 1003 aa5.84□□□□□ -1.47
AC008539.1-201ENST00000507653 CNTN3Q9P232 1028 aa5.84□□□□□ -1.47
AC008539.1-201ENST00000507653 SLC5A6Q9Y289 635 aa5.84□□□□□ -1.47
AC008539.1-201ENST00000507653 RNASE1P07998 156 aaKnown RBP5.83□□□□□ -1.48
AC008539.1-201ENST00000507653 PDIA4P13667 645 aaKnown RBP5.83□□□□□ -1.48
AC008539.1-201ENST00000507653 HOXA5P20719 270 aa5.83□□□□□ -1.48
AC008539.1-201ENST00000507653 NLRP12P59046 1061 aa5.83□□□□□ -1.48
AC008539.1-201ENST00000507653 GGNQ86UU5 652 aa5.83□□□□□ -1.48
AC008539.1-201ENST00000507653 DNAJC25Q9H1X3 360 aa5.83□□□□□ -1.48
AC008539.1-201ENST00000507653 DCTN4Q9UJW0 460 aa5.83□□□□□ -1.48
AC008539.1-201ENST00000507653 ADAMTS6Q9UKP5 1117 aa5.83□□□□□ -1.48
AC008539.1-201ENST00000507653 AMOTL2Q9Y2J4 779 aa5.83□□□□□ -1.48
AC008539.1-201ENST00000507653 RXRBP28702 533 aa5.82□□□□□ -1.48
AC008539.1-201ENST00000507653 USP11P51784 963 aa5.82□□□□□ -1.48
AC008539.1-201ENST00000507653 C12orf50Q8NA57 414 aaPredicted RBP5.82□□□□□ -1.48
AC008539.1-201ENST00000507653 ASAP3Q8TDY4 903 aa5.82□□□□□ -1.48
AC008539.1-201ENST00000507653 RELTQ969Z4 430 aa5.82□□□□□ -1.48
AC008539.1-201ENST00000507653 PPP1R16BQ96T49 567 aa5.82□□□□□ -1.48
AC008539.1-201ENST00000507653 ZFYVE28Q9HCC9 887 aa5.82□□□□□ -1.48
AC008539.1-201ENST00000507653 MBNL3Q9NUK0 354 aaKnown RBP5.82□□□□□ -1.48
AC008539.1-201ENST00000507653 SOX13Q9UN79 622 aa5.82□□□□□ -1.48
AC008539.1-201ENST00000507653 FAM170BA6NMN3 283 aa5.81□□□□□ -1.48
AC008539.1-201ENST00000507653 KRT1P04264 644 aa5.81□□□□□ -1.48
AC008539.1-201ENST00000507653 MLANAQ16655 118 aa5.81□□□□□ -1.48
AC008539.1-201ENST00000507653 PAOXQ6QHF9 649 aa5.81□□□□□ -1.48
AC008539.1-201ENST00000507653 NXPE3Q969Y0 559 aa5.81□□□□□ -1.48
AC008539.1-201ENST00000507653 USP26Q9BXU7 913 aa5.81□□□□□ -1.48
AC008539.1-201ENST00000507653 SUGCTQ9HAC7 445 aa5.81□□□□□ -1.48
AC008539.1-201ENST00000507653 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.81□□□□□ -1.48
AC008539.1-201ENST00000507653 IVNS1ABPQ9Y6Y0 642 aa5.81□□□□□ -1.48
AC008539.1-201ENST00000507653 ZNF503-AS2A6NEH8 195 aa5.8□□□□□ -1.48
AC008539.1-201ENST00000507653 NFKBIEO00221 500 aa5.8□□□□□ -1.48
AC008539.1-201ENST00000507653 EXOSC6Q5RKV6 272 aaKnown RBP5.8□□□□□ -1.48
AC008539.1-201ENST00000507653 ZAR1Q86SH2 424 aa5.8□□□□□ -1.48
AC008539.1-201ENST00000507653 SMG8Q8ND04 991 aaKnown RBP5.8□□□□□ -1.48
AC008539.1-201ENST00000507653 LRRN4CLQ8ND94 238 aa5.8□□□□□ -1.48
AC008539.1-201ENST00000507653 GATA6Q92908 595 aa5.8□□□□□ -1.48
AC008539.1-201ENST00000507653 ZKSCAN3Q9BRR0 538 aa5.8□□□□□ -1.48
AC008539.1-201ENST00000507653 BHLHE41Q9C0J9 482 aaPredicted RBP5.8□□□□□ -1.48
AC008539.1-201ENST00000507653 FAM95CA0A1B0GW59 222 aa5.79□□□□□ -1.48
AC008539.1-201ENST00000507653 CYP11A1P05108 521 aa5.79□□□□□ -1.48
AC008539.1-201ENST00000507653 FUT4P22083 530 aa5.79□□□□□ -1.48
AC008539.1-201ENST00000507653 NFKBIBQ15653 356 aa5.79□□□□□ -1.48
AC008539.1-201ENST00000507653 GALNT12Q8IXK2 581 aa5.79□□□□□ -1.48
AC008539.1-201ENST00000507653 TMPRSS5Q9H3S3 457 aa5.79□□□□□ -1.48
AC008539.1-201ENST00000507653 A6NHS1 94 aa5.78□□□□□ -1.48
AC008539.1-201ENST00000507653 EREGO14944 169 aa5.78□□□□□ -1.48
AC008539.1-201ENST00000507653 GPR182O15218 404 aa5.78□□□□□ -1.48
AC008539.1-201ENST00000507653 TREHO43280 583 aa5.78□□□□□ -1.48
AC008539.1-201ENST00000507653 CPNE3O75131 537 aaKnown RBP5.78□□□□□ -1.48
AC008539.1-201ENST00000507653 C1QTNF9P0C862 333 aa5.78□□□□□ -1.48
AC008539.1-201ENST00000507653 ACPPP15309 386 aa5.78□□□□□ -1.48
AC008539.1-201ENST00000507653 GSTM4Q03013 218 aa5.78□□□□□ -1.48
AC008539.1-201ENST00000507653 DSC3Q14574 896 aa5.78□□□□□ -1.48
AC008539.1-201ENST00000507653 KIAA0319Q5VV43 1072 aa5.78□□□□□ -1.48
AC008539.1-201ENST00000507653 TBC1D32Q96NH3 1257 aa5.78□□□□□ -1.48
AC008539.1-201ENST00000507653 ASB16Q96NS5 453 aa5.78□□□□□ -1.48
AC008539.1-201ENST00000507653 LRRC4CQ9HCJ2 640 aa5.78□□□□□ -1.48
AC008539.1-201ENST00000507653 PRKAG2Q9UGJ0 569 aa5.78□□□□□ -1.48
AC008539.1-201ENST00000507653 FOXD3Q9UJU5 478 aaPredicted RBP5.78□□□□□ -1.48
AC008539.1-201ENST00000507653 SOX1O00570 391 aaPredicted RBP5.77□□□□□ -1.49
AC008539.1-201ENST00000507653 CYP27A1Q02318 531 aa5.77□□□□□ -1.49
AC008539.1-201ENST00000507653 PEAR1Q5VY43 1037 aaPredicted RBP5.77□□□□□ -1.49
AC008539.1-201ENST00000507653 SYDE1Q6ZW31 735 aaPredicted RBP5.77□□□□□ -1.49
AC008539.1-201ENST00000507653 SND1Q7KZF4 910 aaKnown RBP eCLIP5.77□□□□□ -1.49
AC008539.1-201ENST00000507653 TMPRSS13Q9BYE2 586 aa5.77□□□□□ -1.49
AC008539.1-201ENST00000507653 LOC100289279A0A1B0GTE1 492 aa5.76□□□□□ -1.49
AC008539.1-201ENST00000507653 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.76□□□□□ -1.49
AC008539.1-201ENST00000507653 ESRRAP11474 423 aaPredicted RBP5.76□□□□□ -1.49
AC008539.1-201ENST00000507653 PTPN12Q05209 780 aaKnown RBP5.76□□□□□ -1.49
AC008539.1-201ENST00000507653 BNIP3Q12983 259 aa5.76□□□□□ -1.49
AC008539.1-201ENST00000507653 MAP7Q14244 749 aa5.76□□□□□ -1.49
AC008539.1-201ENST00000507653 TMC7Q7Z402 723 aa5.76□□□□□ -1.49
AC008539.1-201ENST00000507653 VN1R5Q7Z5H4 357 aa5.76□□□□□ -1.49
AC008539.1-201ENST00000507653 ZSCAN29Q8IWY8 852 aaPredicted RBP5.76□□□□□ -1.49
AC008539.1-201ENST00000507653 STK11IPQ8N1F8 1099 aa5.76□□□□□ -1.49
AC008539.1-201ENST00000507653 CLEC4MQ9H2X3 399 aaPredicted RBP5.76□□□□□ -1.49
AC008539.1-201ENST00000507653 RAD18Q9NS91 495 aa5.76□□□□□ -1.49
AC008539.1-201ENST00000507653 EIF1AYO14602 144 aaKnown RBP5.75□□□□□ -1.49
AC008539.1-201ENST00000507653 FOXD2O60548 495 aaPredicted RBP5.75□□□□□ -1.49
AC008539.1-201ENST00000507653 TRPA1O75762 1119 aa5.75□□□□□ -1.49
AC008539.1-201ENST00000507653 FMR1Q06787 632 aaKnown RBP eCLIP5.75□□□□□ -1.49
AC008539.1-201ENST00000507653 DUSP27Q5VZP5 1158 aa5.75□□□□□ -1.49
AC008539.1-201ENST00000507653 PRPF40BQ6NWY9 871 aaKnown RBP5.75□□□□□ -1.49
AC008539.1-201ENST00000507653 CCNJLQ8IV13 435 aa5.75□□□□□ -1.49
AC008539.1-201ENST00000507653 FBF1Q8TES7 1133 aa5.75□□□□□ -1.49
AC008539.1-201ENST00000507653 HHIPQ96QV1 700 aa5.75□□□□□ -1.49
AC008539.1-201ENST00000507653 CORO1BQ9BR76 489 aa5.75□□□□□ -1.49
AC008539.1-201ENST00000507653 LIN7BQ9HAP6 207 aa5.75□□□□□ -1.49
AC008539.1-201ENST00000507653 BIN2Q9UBW5 565 aaPredicted RBP5.75□□□□□ -1.49
AC008539.1-201ENST00000507653 A0A096LPE4 126 aa5.74□□□□□ -1.49
AC008539.1-201ENST00000507653 A0A1W2PPZ6 126 aa5.74□□□□□ -1.49
AC008539.1-201ENST00000507653 TIAF1O95411 115 aa5.74□□□□□ -1.49
AC008539.1-201ENST00000507653 SOX4Q06945 474 aaPredicted RBP5.74□□□□□ -1.49
AC008539.1-201ENST00000507653 PCDH1Q08174 1060 aa5.74□□□□□ -1.49
AC008539.1-201ENST00000507653 CDPF1Q6NVV7 123 aa5.74□□□□□ -1.49
AC008539.1-201ENST00000507653 ZSWIM9Q86XI8 627 aa5.74□□□□□ -1.49
AC008539.1-201ENST00000507653 FBLIM1Q8WUP2 373 aa5.74□□□□□ -1.49
AC008539.1-201ENST00000507653 PPP4R2Q9NY27 417 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms