RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 WDR90Q96KV7 1748 aa17.05■□□□□ 0.32
RNF4-208ENST00000507247 APOBEC3HQ6NTF7 200 aaKnown RBP17.05■□□□□ 0.32
RNF4-208ENST00000507247 OGFOD1Q8N543 542 aa17.05■□□□□ 0.32
RNF4-208ENST00000507247 AIDAQ96BJ3 306 aa17.05■□□□□ 0.32
RNF4-208ENST00000507247 STRBPQ96SI9 672 aaKnown RBP17.05■□□□□ 0.32
RNF4-208ENST00000507247 GPRC5DQ9NZD1 345 aa17.05■□□□□ 0.32
RNF4-208ENST00000507247 BAZ2AQ9UIF9 1905 aaKnown RBP17.04■□□□□ 0.32
RNF4-208ENST00000507247 NAV1Q8NEY1 1877 aa17.04■□□□□ 0.32
RNF4-208ENST00000507247 GLTPD2A6NH11 291 aa17.04■□□□□ 0.32
RNF4-208ENST00000507247 FOXP2O15409 715 aa17.04■□□□□ 0.32
RNF4-208ENST00000507247 EGFRP00533 1210 aa17.04■□□□□ 0.32
RNF4-208ENST00000507247 RBM5P52756 815 aaKnown RBP eCLIP17.04■□□□□ 0.32
RNF4-208ENST00000507247 PPP4CP60510 307 aa17.04■□□□□ 0.32
RNF4-208ENST00000507247 VPS53Q5VIR6 699 aa17.04■□□□□ 0.32
RNF4-208ENST00000507247 DPY19L2Q6NUT2 758 aa17.04■□□□□ 0.32
RNF4-208ENST00000507247 ZBED3Q96IU2 234 aaPredicted RBP17.04■□□□□ 0.32
RNF4-208ENST00000507247 BACH2Q9BYV9 841 aa17.04■□□□□ 0.32
RNF4-208ENST00000507247 SCN4AP35499 1836 aa17.04■□□□□ 0.32
RNF4-208ENST00000507247 PRKAB2O43741 272 aa17.03■□□□□ 0.32
RNF4-208ENST00000507247 EPS15P42566 896 aa17.03■□□□□ 0.32
RNF4-208ENST00000507247 RHBDL3P58872 404 aa17.03■□□□□ 0.32
RNF4-208ENST00000507247 PTH1RQ03431 593 aa17.03■□□□□ 0.32
RNF4-208ENST00000507247 SAMD7Q7Z3H4 446 aa17.03■□□□□ 0.32
RNF4-208ENST00000507247 MTMR14Q8NCE2 650 aa17.03■□□□□ 0.32
RNF4-208ENST00000507247 SH3RF3Q8TEJ3 882 aaPredicted RBP17.03■□□□□ 0.32
RNF4-208ENST00000507247 L3MBTL3Q96JM7 780 aaPredicted RBP17.03■□□□□ 0.32
RNF4-208ENST00000507247 PRMT6Q96LA8 375 aaPredicted RBP17.03■□□□□ 0.32
RNF4-208ENST00000507247 NOL10Q9BSC4 688 aaKnown RBP17.03■□□□□ 0.32
RNF4-208ENST00000507247 MYOZ2Q9NPC6 264 aa17.03■□□□□ 0.32
RNF4-208ENST00000507247 DDX60LQ5H9U9 1706 aaKnown RBP17.03■□□□□ 0.32
RNF4-208ENST00000507247 SPDYE2BA6NHP3 402 aa17.02■□□□□ 0.32
RNF4-208ENST00000507247 BAG3O95817 575 aa17.02■□□□□ 0.32
RNF4-208ENST00000507247 SPDYE6P0CI01 402 aa17.02■□□□□ 0.32
RNF4-208ENST00000507247 MMP14P50281 582 aa17.02■□□□□ 0.32
RNF4-208ENST00000507247 MFAP1P55081 439 aaKnown RBP17.02■□□□□ 0.32
RNF4-208ENST00000507247 DLGAP5Q15398 846 aa17.02■□□□□ 0.32
RNF4-208ENST00000507247 CDC42EP5Q6NZY7 148 aa17.02■□□□□ 0.32
RNF4-208ENST00000507247 LSG1Q9H089 658 aaKnown RBP17.02■□□□□ 0.32
RNF4-208ENST00000507247 MYH1P12882 1939 aa17.02■□□□□ 0.31
RNF4-208ENST00000507247 HSPD1P10809 573 aaKnown RBP17.01■□□□□ 0.31
RNF4-208ENST00000507247 TBC1D10BQ4KMP7 808 aaPredicted RBP17.01■□□□□ 0.31
RNF4-208ENST00000507247 RBM26Q5T8P6 1007 aaKnown RBP17.01■□□□□ 0.31
RNF4-208ENST00000507247 TRPM4Q8TD43 1214 aa17.01■□□□□ 0.31
RNF4-208ENST00000507247 SDR42E1Q8WUS8 393 aa17.01■□□□□ 0.31
RNF4-208ENST00000507247 TDRD3Q9H7E2 651 aaKnown RBP17.01■□□□□ 0.31
RNF4-208ENST00000507247 ANO2Q9NQ90 1003 aa17.01■□□□□ 0.31
RNF4-208ENST00000507247 SLC4A4Q9Y6R1 1079 aa17.01■□□□□ 0.31
RNF4-208ENST00000507247 LAMB1P07942 1786 aa17■□□□□ 0.31
RNF4-208ENST00000507247 GSG1L2A8MUP6 293 aa17■□□□□ 0.31
RNF4-208ENST00000507247 POTECB2RU33 542 aa17■□□□□ 0.31
RNF4-208ENST00000507247 H7C1D1 291 aa17■□□□□ 0.31
RNF4-208ENST00000507247 WNT10BO00744 389 aa17■□□□□ 0.31
RNF4-208ENST00000507247 KIF3CO14782 793 aa17■□□□□ 0.31
RNF4-208ENST00000507247 PLCG2P16885 1265 aa17■□□□□ 0.31
RNF4-208ENST00000507247 LMOD1P29536 600 aaPredicted RBP17■□□□□ 0.31
RNF4-208ENST00000507247 KIF4BQ2VIQ3 1234 aa17■□□□□ 0.31
RNF4-208ENST00000507247 NBPF9Q3BBW0 867 aa17■□□□□ 0.31
RNF4-208ENST00000507247 CERS3Q8IU89 383 aa17■□□□□ 0.31
RNF4-208ENST00000507247 EPB41L4AQ9HCS5 686 aaPredicted RBP17■□□□□ 0.31
RNF4-208ENST00000507247 USP40Q9NVE5 1235 aa17■□□□□ 0.31
RNF4-208ENST00000507247 LAMA4Q16363 1823 aa17■□□□□ 0.31
RNF4-208ENST00000507247 WDHD1O75717 1129 aaPredicted RBP16.99■□□□□ 0.31
RNF4-208ENST00000507247 REC8O95072 547 aa16.99■□□□□ 0.31
RNF4-208ENST00000507247 GNAT2P19087 354 aa16.99■□□□□ 0.31
RNF4-208ENST00000507247 KIAA1211Q6ZU35 1233 aa16.99■□□□□ 0.31
RNF4-208ENST00000507247 TEX11Q8IYF3 940 aa16.99■□□□□ 0.31
RNF4-208ENST00000507247 DSCC1Q9BVC3 393 aa16.99■□□□□ 0.31
RNF4-208ENST00000507247 CRNKL1Q9BZJ0 848 aaKnown RBP16.99■□□□□ 0.31
RNF4-208ENST00000507247 ASTN2O75129 1339 aaPredicted RBP16.98■□□□□ 0.31
RNF4-208ENST00000507247 CLRN2A0PK11 232 aa16.98■□□□□ 0.31
RNF4-208ENST00000507247 PATL2C9JE40 543 aaKnown RBP16.98■□□□□ 0.31
RNF4-208ENST00000507247 HIRAP54198 1017 aaPredicted RBP16.98■□□□□ 0.31
RNF4-208ENST00000507247 CACNB3P54284 484 aa16.98■□□□□ 0.31
RNF4-208ENST00000507247 SPDYE2Q495Y8 402 aa16.98■□□□□ 0.31
RNF4-208ENST00000507247 TGFBRAP1Q8WUH2 860 aa16.98■□□□□ 0.31
RNF4-208ENST00000507247 MAP4K1Q92918 833 aa16.98■□□□□ 0.31
RNF4-208ENST00000507247 USP26Q9BXU7 913 aa16.98■□□□□ 0.31
RNF4-208ENST00000507247 DDX4Q9NQI0 724 aaKnown RBP16.98■□□□□ 0.31
RNF4-208ENST00000507247 ZNF70Q9UC06 446 aaPredicted RBP16.98■□□□□ 0.31
RNF4-208ENST00000507247 MKRN1Q9UHC7 482 aaKnown RBP16.98■□□□□ 0.31
RNF4-208ENST00000507247 HACL1Q9UJ83 578 aa16.98■□□□□ 0.31
RNF4-208ENST00000507247 POLR2AP24928 1970 aaKnown RBP16.98■□□□□ 0.31
RNF4-208ENST00000507247 NFIAQ12857 509 aa16.97■□□□□ 0.31
RNF4-208ENST00000507247 IFNL3Q8IZI9 196 aa16.97■□□□□ 0.31
RNF4-208ENST00000507247 NMRK2Q9NPI5 230 aa16.97■□□□□ 0.31
RNF4-208ENST00000507247 DCP1AQ9NPI6 582 aaPredicted RBP16.97■□□□□ 0.31
RNF4-208ENST00000507247 ADARB2Q9NS39 739 aaKnown RBP16.97■□□□□ 0.31
RNF4-208ENST00000507247 RPAP1Q9BWH6 1393 aaPredicted RBP16.97■□□□□ 0.31
RNF4-208ENST00000507247 FLT1P17948 1338 aa16.96■□□□□ 0.31
RNF4-208ENST00000507247 SIPA1L1O43166 1804 aa16.96■□□□□ 0.31
RNF4-208ENST00000507247 APPP05067 770 aa16.96■□□□□ 0.31
RNF4-208ENST00000507247 USP5P45974 858 aa16.96■□□□□ 0.31
RNF4-208ENST00000507247 PICALMQ13492 652 aa16.96■□□□□ 0.31
RNF4-208ENST00000507247 MAPKAPK5Q8IW41 473 aa16.96■□□□□ 0.31
RNF4-208ENST00000507247 IDI2Q9BXS1 227 aa16.96■□□□□ 0.31
RNF4-208ENST00000507247 FAM198AQ9UFP1 575 aa16.96■□□□□ 0.31
RNF4-208ENST00000507247 RBM8AQ9Y5S9 174 aaKnown RBP16.96■□□□□ 0.31
RNF4-208ENST00000507247 FGAP02671 866 aa16.95■□□□□ 0.3
RNF4-208ENST00000507247 EPHX2P34913 555 aa16.95■□□□□ 0.3
RNF4-208ENST00000507247 ALX1Q15699 326 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms