RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 GTPBP3Q969Y2 492 aaKnown RBP9.34□□□□□ -0.91
NR1I3-224ENST00000507215 NBPF4Q96M43 638 aa9.34□□□□□ -0.91
NR1I3-224ENST00000507215 MKNK1Q9BUB5 465 aa9.34□□□□□ -0.91
NR1I3-224ENST00000507215 NUCKS1Q9H1E3 243 aaKnown RBP9.34□□□□□ -0.91
NR1I3-224ENST00000507215 USTQ9Y2C2 406 aa9.34□□□□□ -0.91
NR1I3-224ENST00000507215 KDM2BQ8NHM5 1336 aa9.33□□□□□ -0.92
NR1I3-224ENST00000507215 LOC102724428A0A0B4J2F2 783 aa9.33□□□□□ -0.92
NR1I3-224ENST00000507215 SIK1P57059 783 aa9.33□□□□□ -0.92
NR1I3-224ENST00000507215 ARSJQ5FYB0 599 aaPredicted RBP9.33□□□□□ -0.92
NR1I3-224ENST00000507215 SV2AQ7L0J3 742 aa9.33□□□□□ -0.92
NR1I3-224ENST00000507215 SPG7Q9UQ90 795 aa9.33□□□□□ -0.92
NR1I3-224ENST00000507215 WDR90Q96KV7 1748 aa9.33□□□□□ -0.92
NR1I3-224ENST00000507215 RGPD2P0DJD1 1756 aa9.32□□□□□ -0.92
NR1I3-224ENST00000507215 PKD1L3Q7Z443 1732 aa9.32□□□□□ -0.92
NR1I3-224ENST00000507215 TOGARAM1Q9Y4F4 1720 aa9.32□□□□□ -0.92
NR1I3-224ENST00000507215 GMPRP36959 345 aa9.32□□□□□ -0.92
NR1I3-224ENST00000507215 KRT76Q01546 638 aa9.32□□□□□ -0.92
NR1I3-224ENST00000507215 ZNF280CQ8ND82 737 aa9.32□□□□□ -0.92
NR1I3-224ENST00000507215 HSH2DQ96JZ2 352 aa9.32□□□□□ -0.92
NR1I3-224ENST00000507215 ZCCHC2Q9C0B9 1178 aaKnown RBP9.32□□□□□ -0.92
NR1I3-224ENST00000507215 SAP130Q9H0E3 1048 aa9.32□□□□□ -0.92
NR1I3-224ENST00000507215 CCDC87Q9NVE4 849 aa9.32□□□□□ -0.92
NR1I3-224ENST00000507215 SEPT3Q9UH03 358 aa9.32□□□□□ -0.92
NR1I3-224ENST00000507215 LRFN2Q9ULH4 789 aa9.32□□□□□ -0.92
NR1I3-224ENST00000507215 BCS1LQ9Y276 419 aa9.32□□□□□ -0.92
NR1I3-224ENST00000507215 CHMP3Q9Y3E7 222 aa9.32□□□□□ -0.92
NR1I3-224ENST00000507215 ITGB4P16144 1822 aa9.32□□□□□ -0.92
NR1I3-224ENST00000507215 PXDNLA1KZ92 1463 aa9.32□□□□□ -0.92
NR1I3-224ENST00000507215 H7C1W4 665 aa9.31□□□□□ -0.92
NR1I3-224ENST00000507215 MMP10P09238 476 aa9.31□□□□□ -0.92
NR1I3-224ENST00000507215 GAS6Q14393 721 aa9.31□□□□□ -0.92
NR1I3-224ENST00000507215 RNFT1Q5M7Z0 435 aa9.31□□□□□ -0.92
NR1I3-224ENST00000507215 LRRC69Q6ZNQ3 347 aa9.31□□□□□ -0.92
NR1I3-224ENST00000507215 BICDL1Q6ZP65 573 aa9.31□□□□□ -0.92
NR1I3-224ENST00000507215 RHPN1Q8TCX5 695 aa9.31□□□□□ -0.92
NR1I3-224ENST00000507215 IRF7Q92985 503 aa9.31□□□□□ -0.92
NR1I3-224ENST00000507215 TMOD3Q9NYL9 352 aa9.31□□□□□ -0.92
NR1I3-224ENST00000507215 RTCBQ9Y3I0 505 aaKnown RBP9.31□□□□□ -0.92
NR1I3-224ENST00000507215 ZNF831Q5JPB2 1677 aa9.31□□□□□ -0.92
NR1I3-224ENST00000507215 MAP2P11137 1827 aaKnown RBP9.31□□□□□ -0.92
NR1I3-224ENST00000507215 NCAPD2Q15021 1401 aa9.31□□□□□ -0.92
NR1I3-224ENST00000507215 CYP27B1O15528 508 aa9.3□□□□□ -0.92
NR1I3-224ENST00000507215 PRELPP51888 382 aa9.3□□□□□ -0.92
NR1I3-224ENST00000507215 TMF1P82094 1093 aa9.3□□□□□ -0.92
NR1I3-224ENST00000507215 NAA30Q147X3 362 aaPredicted RBP9.3□□□□□ -0.92
NR1I3-224ENST00000507215 COX20Q5RI15 118 aa9.3□□□□□ -0.92
NR1I3-224ENST00000507215 TRAPPC3LQ5T215 181 aa9.3□□□□□ -0.92
NR1I3-224ENST00000507215 PGBD3Q8N328 593 aa9.3□□□□□ -0.92
NR1I3-224ENST00000507215 PIGBQ92521 554 aa9.3□□□□□ -0.92
NR1I3-224ENST00000507215 GMCL1Q96IK5 515 aa9.3□□□□□ -0.92
NR1I3-224ENST00000507215 NDFIP2Q9NV92 336 aa9.3□□□□□ -0.92
NR1I3-224ENST00000507215 KLK14Q9P0G3 267 aa9.3□□□□□ -0.92
NR1I3-224ENST00000507215 ARFGEF1Q9Y6D6 1849 aa9.29□□□□□ -0.92
NR1I3-224ENST00000507215 FYB1O15117 783 aa9.29□□□□□ -0.92
NR1I3-224ENST00000507215 BNIP3LO60238 219 aa9.29□□□□□ -0.92
NR1I3-224ENST00000507215 NEUROD1Q13562 356 aa9.29□□□□□ -0.92
NR1I3-224ENST00000507215 RRS1Q15050 365 aaKnown RBP9.29□□□□□ -0.92
NR1I3-224ENST00000507215 RTN1Q16799 776 aa9.29□□□□□ -0.92
NR1I3-224ENST00000507215 EFHC2Q5JST6 749 aa9.29□□□□□ -0.92
NR1I3-224ENST00000507215 FAM26DQ5JW98 314 aa9.29□□□□□ -0.92
NR1I3-224ENST00000507215 ARHGAP27Q6ZUM4 889 aa9.29□□□□□ -0.92
NR1I3-224ENST00000507215 SMC1BQ8NDV3 1235 aa9.29□□□□□ -0.92
NR1I3-224ENST00000507215 SUSD3Q96L08 255 aa9.29□□□□□ -0.92
NR1I3-224ENST00000507215 TNRC6CQ9HCJ0 1690 aaKnown RBP9.29□□□□□ -0.92
NR1I3-224ENST00000507215 PCNTO95613 3336 aa9.28□□□□□ -0.92
NR1I3-224ENST00000507215 TONSLQ96HA7 1378 aa9.28□□□□□ -0.92
NR1I3-224ENST00000507215 HSP90AB1P08238 724 aaKnown RBP9.28□□□□□ -0.92
NR1I3-224ENST00000507215 LBRQ14739 615 aaKnown RBP9.28□□□□□ -0.92
NR1I3-224ENST00000507215 NLRP8Q86W28 1048 aa9.28□□□□□ -0.92
NR1I3-224ENST00000507215 IFNL2Q8IZJ0 200 aa9.28□□□□□ -0.92
NR1I3-224ENST00000507215 USHBP1Q8N6Y0 703 aa9.28□□□□□ -0.92
NR1I3-224ENST00000507215 LINC00116Q8NCU8 138 aa9.28□□□□□ -0.92
NR1I3-224ENST00000507215 MYO19Q96H55 970 aa9.28□□□□□ -0.92
NR1I3-224ENST00000507215 TESK2Q96S53 571 aa9.28□□□□□ -0.92
NR1I3-224ENST00000507215 SIN3AQ96ST3 1273 aa9.28□□□□□ -0.92
NR1I3-224ENST00000507215 COL25A1Q9BXS0 654 aaPredicted RBP9.28□□□□□ -0.92
NR1I3-224ENST00000507215 PIM2Q9P1W9 311 aa9.28□□□□□ -0.92
NR1I3-224ENST00000507215 CNTNAP4Q9C0A0 1308 aa9.28□□□□□ -0.92
NR1I3-224ENST00000507215 BRCA1P38398 1863 aaKnown RBP9.28□□□□□ -0.92
NR1I3-224ENST00000507215 RFC4P35249 363 aa9.27□□□□□ -0.93
NR1I3-224ENST00000507215 HSP90AB2PQ58FF8 381 aa9.27□□□□□ -0.93
NR1I3-224ENST00000507215 VTI1AQ96AJ9 217 aa9.27□□□□□ -0.93
NR1I3-224ENST00000507215 ABHD17AQ96GS6 310 aa9.27□□□□□ -0.93
NR1I3-224ENST00000507215 NMRK2Q9NPI5 230 aa9.27□□□□□ -0.93
NR1I3-224ENST00000507215 C4AP0C0L4 1744 aa9.27□□□□□ -0.93
NR1I3-224ENST00000507215 KIAA1551Q9HCM1 1747 aa9.27□□□□□ -0.93
NR1I3-224ENST00000507215 KIF20BQ96Q89 1820 aa9.26□□□□□ -0.93
NR1I3-224ENST00000507215 ERVV-2B6SEH9 535 aa9.26□□□□□ -0.93
NR1I3-224ENST00000507215 DGKZQ13574 1117 aa9.26□□□□□ -0.93
NR1I3-224ENST00000507215 DALRD3Q5D0E6 543 aaKnown RBP9.26□□□□□ -0.93
NR1I3-224ENST00000507215 C9orf131Q5VYM1 1079 aa9.26□□□□□ -0.93
NR1I3-224ENST00000507215 AMIGO3Q86WK7 504 aa9.26□□□□□ -0.93
NR1I3-224ENST00000507215 COL26A1Q96A83 441 aa9.26□□□□□ -0.93
NR1I3-224ENST00000507215 DCAF5Q96JK2 942 aa9.26□□□□□ -0.93
NR1I3-224ENST00000507215 DMGDHQ9UI17 866 aaKnown RBP9.26□□□□□ -0.93
NR1I3-224ENST00000507215 PCDHGC4Q9Y5F7 938 aa9.26□□□□□ -0.93
NR1I3-224ENST00000507215 KDRP35968 1356 aa9.25□□□□□ -0.93
NR1I3-224ENST00000507215 N4BP2Q86UW6 1770 aaPredicted RBP9.25□□□□□ -0.93
NR1I3-224ENST00000507215 ST20-MTHFSA0A0A6YYL1 179 aa9.25□□□□□ -0.93
NR1I3-224ENST00000507215 A0A0G2JLW4 131 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms