RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 RAC1P63000 192 aa9.3□□□□□ -0.92
HERC4-213ENST00000506515 ARID5AQ03989 594 aa9.3□□□□□ -0.92
HERC4-213ENST00000506515 PTPN11Q06124 597 aaPredicted RBP9.3□□□□□ -0.92
HERC4-213ENST00000506515 PDE3AQ14432 1141 aa9.3□□□□□ -0.92
HERC4-213ENST00000506515 SF3A1Q15459 793 aaKnown RBP9.3□□□□□ -0.92
HERC4-213ENST00000506515 FOXD4L6Q3SYB3 417 aaPredicted RBP9.3□□□□□ -0.92
HERC4-213ENST00000506515 FOXD4L3Q6VB84 417 aaPredicted RBP9.3□□□□□ -0.92
HERC4-213ENST00000506515 DTWD1Q8N5C7 304 aa9.3□□□□□ -0.92
HERC4-213ENST00000506515 ACSBG1Q96GR2 724 aa9.3□□□□□ -0.92
HERC4-213ENST00000506515 DRC1Q96MC2 740 aa9.3□□□□□ -0.92
HERC4-213ENST00000506515 NT5C1AQ9BXI3 368 aa9.3□□□□□ -0.92
HERC4-213ENST00000506515 TANGO6Q9C0B7 1094 aa9.3□□□□□ -0.92
HERC4-213ENST00000506515 KCNK4Q9NYG8 393 aa9.3□□□□□ -0.92
HERC4-213ENST00000506515 MKL2Q9ULH7 1088 aa9.3□□□□□ -0.92
HERC4-213ENST00000506515 FAM229AH3BQW9 127 aa9.29□□□□□ -0.92
HERC4-213ENST00000506515 WIPF1O43516 503 aa9.29□□□□□ -0.92
HERC4-213ENST00000506515 TRIM37O94972 964 aa9.29□□□□□ -0.92
HERC4-213ENST00000506515 FAM196AQ6ZSG2 479 aa9.29□□□□□ -0.92
HERC4-213ENST00000506515 FBXO11Q86XK2 927 aa9.29□□□□□ -0.92
HERC4-213ENST00000506515 FMR1NBQ8N0W7 255 aaPredicted RBP9.29□□□□□ -0.92
HERC4-213ENST00000506515 FBXO27Q8NI29 283 aa9.29□□□□□ -0.92
HERC4-213ENST00000506515 GPBAR1Q8TDU6 330 aa9.29□□□□□ -0.92
HERC4-213ENST00000506515 GATAD2BQ8WXI9 593 aa9.29□□□□□ -0.92
HERC4-213ENST00000506515 GAL3ST3Q96A11 431 aa9.29□□□□□ -0.92
HERC4-213ENST00000506515 CCDC86Q9H6F5 360 aaKnown RBP9.29□□□□□ -0.92
HERC4-213ENST00000506515 PRKAG2Q9UGJ0 569 aa9.29□□□□□ -0.92
HERC4-213ENST00000506515 LOC100289279A0A1B0GTE1 492 aa9.28□□□□□ -0.92
HERC4-213ENST00000506515 GNB5O14775 395 aa9.28□□□□□ -0.92
HERC4-213ENST00000506515 CRKP46108 304 aa9.28□□□□□ -0.92
HERC4-213ENST00000506515 APOBRQ0VD83 1088 aa9.28□□□□□ -0.92
HERC4-213ENST00000506515 DIEXFQ68CQ4 756 aaKnown RBP9.28□□□□□ -0.92
HERC4-213ENST00000506515 CCDC84Q86UT8 332 aaPredicted RBP9.28□□□□□ -0.92
HERC4-213ENST00000506515 LIG1P18858 919 aa9.27□□□□□ -0.93
HERC4-213ENST00000506515 TRIM28Q13263 835 aaKnown RBP9.27□□□□□ -0.93
HERC4-213ENST00000506515 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.27□□□□□ -0.93
HERC4-213ENST00000506515 ZSCAN1Q8NBB4 408 aa9.27□□□□□ -0.93
HERC4-213ENST00000506515 RASGRP4Q8TDF6 673 aa9.27□□□□□ -0.93
HERC4-213ENST00000506515 UBASH3BQ8TF42 649 aa9.27□□□□□ -0.93
HERC4-213ENST00000506515 NKD1Q969G9 470 aa9.27□□□□□ -0.93
HERC4-213ENST00000506515 PCDHA4Q9UN74 947 aa9.27□□□□□ -0.93
HERC4-213ENST00000506515 EFR3BQ9Y2G0 817 aa9.27□□□□□ -0.93
HERC4-213ENST00000506515 FAM221AA4D161 298 aa9.26□□□□□ -0.93
HERC4-213ENST00000506515 SPDYE3A6NKU9 549 aa9.26□□□□□ -0.93
HERC4-213ENST00000506515 PIK3R2O00459 728 aa9.26□□□□□ -0.93
HERC4-213ENST00000506515 BPNT1O95861 308 aa9.26□□□□□ -0.93
HERC4-213ENST00000506515 DLGAP3O95886 979 aa9.26□□□□□ -0.93
HERC4-213ENST00000506515 ATF4P18848 351 aaPredicted RBP9.26□□□□□ -0.93
HERC4-213ENST00000506515 DUOXA2Q1HG44 320 aa9.26□□□□□ -0.93
HERC4-213ENST00000506515 SEZ6Q53EL9 994 aa9.26□□□□□ -0.93
HERC4-213ENST00000506515 DCAF11Q8TEB1 546 aa9.26□□□□□ -0.93
HERC4-213ENST00000506515 WDR89Q96FK6 387 aaPredicted RBP9.26□□□□□ -0.93
HERC4-213ENST00000506515 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.26□□□□□ -0.93
HERC4-213ENST00000506515 GINM1Q9NU53 330 aa9.26□□□□□ -0.93
HERC4-213ENST00000506515 CNTNAP5Q8WYK1 1306 aa9.26□□□□□ -0.93
HERC4-213ENST00000506515 DLL1O00548 723 aa9.25□□□□□ -0.93
HERC4-213ENST00000506515 ZNF862O60290 1169 aa9.25□□□□□ -0.93
HERC4-213ENST00000506515 CILPO75339 1184 aa9.25□□□□□ -0.93
HERC4-213ENST00000506515 LORP23490 312 aaPredicted RBP9.25□□□□□ -0.93
HERC4-213ENST00000506515 SCARA3Q6AZY7 606 aa9.25□□□□□ -0.93
HERC4-213ENST00000506515 PODNQ7Z5L7 613 aa9.25□□□□□ -0.93
HERC4-213ENST00000506515 SPATA32Q96LK8 384 aa9.25□□□□□ -0.93
HERC4-213ENST00000506515 GMLQ99445 158 aa9.25□□□□□ -0.93
HERC4-213ENST00000506515 KRT82Q9NSB4 513 aa9.25□□□□□ -0.93
HERC4-213ENST00000506515 ROBO2Q9HCK4 1378 aa9.24□□□□□ -0.93
HERC4-213ENST00000506515 WISP1O95388 367 aa9.24□□□□□ -0.93
HERC4-213ENST00000506515 ATP2B1P20020 1258 aa9.24□□□□□ -0.93
HERC4-213ENST00000506515 MCM4P33991 863 aa9.24□□□□□ -0.93
HERC4-213ENST00000506515 NASPP49321 788 aaPredicted RBP9.24□□□□□ -0.93
HERC4-213ENST00000506515 CDK8P49336 464 aa9.24□□□□□ -0.93
HERC4-213ENST00000506515 MPP2Q14168 576 aa9.24□□□□□ -0.93
HERC4-213ENST00000506515 CWF19L2Q2TBE0 894 aaKnown RBP9.24□□□□□ -0.93
HERC4-213ENST00000506515 RAD18Q9NS91 495 aa9.24□□□□□ -0.93
HERC4-213ENST00000506515 CACNA2D2Q9NY47 1150 aa9.24□□□□□ -0.93
HERC4-213ENST00000506515 GTF2F1P35269 517 aaKnown RBP eCLIP9.23□□□□□ -0.93
HERC4-213ENST00000506515 HNRNPUQ00839 825 aaKnown RBP eCLIP9.23□□□□□ -0.93
HERC4-213ENST00000506515 RPL6Q02878 288 aaKnown RBP9.23□□□□□ -0.93
HERC4-213ENST00000506515 PRRT3Q5FWE3 981 aa9.23□□□□□ -0.93
HERC4-213ENST00000506515 HP1BP3Q5SSJ5 553 aaPredicted RBP9.23□□□□□ -0.93
HERC4-213ENST00000506515 MCF2L2Q86YR7 1114 aa9.23□□□□□ -0.93
HERC4-213ENST00000506515 BEND7Q8N7W2 519 aaPredicted RBP9.23□□□□□ -0.93
HERC4-213ENST00000506515 SEC16BQ96JE7 1060 aa9.23□□□□□ -0.93
HERC4-213ENST00000506515 ADAMTS8Q9UP79 889 aa9.23□□□□□ -0.93
HERC4-213ENST00000506515 INPP5AQ14642 412 aa9.22□□□□□ -0.93
HERC4-213ENST00000506515 EXOSC6Q5RKV6 272 aaKnown RBP9.22□□□□□ -0.93
HERC4-213ENST00000506515 ACAD11Q709F0 780 aa9.22□□□□□ -0.93
HERC4-213ENST00000506515 REC114Q7Z4M0 266 aa9.22□□□□□ -0.93
HERC4-213ENST00000506515 SLITRK4Q8IW52 837 aa9.22□□□□□ -0.93
HERC4-213ENST00000506515 DHX38Q92620 1227 aaKnown RBP9.22□□□□□ -0.93
HERC4-213ENST00000506515 RUSC1Q9BVN2 902 aa9.22□□□□□ -0.93
HERC4-213ENST00000506515 LRRC3Q9BY71 257 aa9.22□□□□□ -0.93
HERC4-213ENST00000506515 BRMS1Q9HCU9 246 aa9.22□□□□□ -0.93
HERC4-213ENST00000506515 NOP53Q9NZM5 478 aaKnown RBP9.22□□□□□ -0.93
HERC4-213ENST00000506515 DCDC2CA8MYV0 355 aa9.21□□□□□ -0.94
HERC4-213ENST00000506515 AOC2O75106 756 aa9.21□□□□□ -0.94
HERC4-213ENST00000506515 SSBP05455 408 aaKnown RBP eCLIP9.21□□□□□ -0.94
HERC4-213ENST00000506515 FGRP09769 529 aa9.21□□□□□ -0.94
HERC4-213ENST00000506515 ELNP15502 786 aa9.21□□□□□ -0.94
HERC4-213ENST00000506515 SELPP16109 830 aa9.21□□□□□ -0.94
HERC4-213ENST00000506515 GRIK4Q16099 956 aa9.21□□□□□ -0.94
HERC4-213ENST00000506515 WIPI1Q5MNZ9 446 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms