RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 NWD2Q9ULI1 1742 aa18.23■□□□□ 0.51
SCLT1-208ENST00000506368 A0A087WWV3 80 aa18.22■□□□□ 0.51
SCLT1-208ENST00000506368 H3BQF6 201 aa18.22■□□□□ 0.51
SCLT1-208ENST00000506368 TEX2Q8IWB9 1127 aa18.22■□□□□ 0.51
SCLT1-208ENST00000506368 FMNL2Q96PY5 1086 aa18.22■□□□□ 0.51
SCLT1-208ENST00000506368 HELLSQ9NRZ9 838 aa18.22■□□□□ 0.51
SCLT1-208ENST00000506368 RGS17Q9UGC6 210 aaPredicted RBP18.22■□□□□ 0.51
SCLT1-208ENST00000506368 JRKLQ9Y4A0 524 aa18.22■□□□□ 0.51
SCLT1-208ENST00000506368 CUTAO60888 179 aa18.22■□□□□ 0.51
SCLT1-208ENST00000506368 PPP6R2O75170 966 aa18.22■□□□□ 0.51
SCLT1-208ENST00000506368 CORO7P57737 925 aa18.22■□□□□ 0.51
SCLT1-208ENST00000506368 EVA1CP58658 441 aa18.22■□□□□ 0.51
SCLT1-208ENST00000506368 MYSM1Q5VVJ2 828 aa18.22■□□□□ 0.51
SCLT1-208ENST00000506368 EFCAB13Q8IY85 973 aa18.22■□□□□ 0.51
SCLT1-208ENST00000506368 VPS18Q9P253 973 aa18.22■□□□□ 0.51
SCLT1-208ENST00000506368 DACH1Q9UI36 760 aa18.22■□□□□ 0.51
SCLT1-208ENST00000506368 MAP3K15Q6ZN16 1313 aa18.22■□□□□ 0.51
SCLT1-208ENST00000506368 COL15A1P39059 1388 aa18.22■□□□□ 0.51
SCLT1-208ENST00000506368 ZNF609O15014 1411 aa18.21■□□□□ 0.51
SCLT1-208ENST00000506368 CCDC175P0C221 793 aa18.21■□□□□ 0.51
SCLT1-208ENST00000506368 WDR24Q96S15 920 aa18.21■□□□□ 0.51
SCLT1-208ENST00000506368 MYCBPQ99417 103 aaPredicted RBP18.21■□□□□ 0.51
SCLT1-208ENST00000506368 DEF6Q9H4E7 631 aa18.21■□□□□ 0.51
SCLT1-208ENST00000506368 HOOK1Q9UJC3 728 aaKnown RBP18.21■□□□□ 0.51
SCLT1-208ENST00000506368 CDC23Q9UJX2 597 aa18.21■□□□□ 0.51
SCLT1-208ENST00000506368 L1RE1Q9UN81 338 aa18.21■□□□□ 0.51
SCLT1-208ENST00000506368 PALLDQ8WX93 1383 aa18.21■□□□□ 0.51
SCLT1-208ENST00000506368 CSB-PGBD3P0DP91 1061 aa18.21■□□□□ 0.51
SCLT1-208ENST00000506368 PFKFB1P16118 471 aa18.21■□□□□ 0.51
SCLT1-208ENST00000506368 PDIA3P30101 505 aaKnown RBP18.21■□□□□ 0.51
SCLT1-208ENST00000506368 MAPK8IP2Q13387 824 aaPredicted RBP18.21■□□□□ 0.51
SCLT1-208ENST00000506368 USHBP1Q8N6Y0 703 aa18.21■□□□□ 0.51
SCLT1-208ENST00000506368 FBXW7Q969H0 707 aa18.21■□□□□ 0.51
SCLT1-208ENST00000506368 NCAPGQ9BPX3 1015 aa18.21■□□□□ 0.51
SCLT1-208ENST00000506368 VIPAS39Q9H9C1 493 aa18.21■□□□□ 0.51
SCLT1-208ENST00000506368 ATP1A3P13637 1013 aa18.2■□□□□ 0.5
SCLT1-208ENST00000506368 AXDND1Q5T1B0 1012 aaPredicted RBP18.2■□□□□ 0.5
SCLT1-208ENST00000506368 ANO1Q5XXA6 986 aa18.2■□□□□ 0.5
SCLT1-208ENST00000506368 SPECC1LQ69YQ0 1117 aa18.2■□□□□ 0.5
SCLT1-208ENST00000506368 C8orf76Q96K31 380 aa18.2■□□□□ 0.5
SCLT1-208ENST00000506368 SIL1Q9H173 461 aa18.2■□□□□ 0.5
SCLT1-208ENST00000506368 TLR7Q9NYK1 1049 aaKnown RBP18.2■□□□□ 0.5
SCLT1-208ENST00000506368 HPSEQ9Y251 543 aa18.2■□□□□ 0.5
SCLT1-208ENST00000506368 EIF3CLB5ME19 914 aaKnown RBP18.19■□□□□ 0.5
SCLT1-208ENST00000506368 SYKP43405 635 aa18.19■□□□□ 0.5
SCLT1-208ENST00000506368 CTCFLQ8NI51 663 aaPredicted RBP18.19■□□□□ 0.5
SCLT1-208ENST00000506368 CCDC12Q8WUD4 166 aaPredicted RBP18.19■□□□□ 0.5
SCLT1-208ENST00000506368 DHX58Q96C10 678 aa18.19■□□□□ 0.5
SCLT1-208ENST00000506368 SUCLG2Q96I99 432 aa18.19■□□□□ 0.5
SCLT1-208ENST00000506368 EIF3CQ99613 913 aaKnown RBP18.19■□□□□ 0.5
SCLT1-208ENST00000506368 HAUS7Q99871 368 aa18.19■□□□□ 0.5
SCLT1-208ENST00000506368 PDE11AQ9HCR9 933 aa18.19■□□□□ 0.5
SCLT1-208ENST00000506368 COPRSQ9NQ92 184 aa18.19■□□□□ 0.5
SCLT1-208ENST00000506368 CHRM1P11229 460 aaPredicted RBP18.19■□□□□ 0.5
SCLT1-208ENST00000506368 MCM3P25205 808 aa18.19■□□□□ 0.5
SCLT1-208ENST00000506368 SLC39A14Q15043 492 aa18.19■□□□□ 0.5
SCLT1-208ENST00000506368 SWT1Q5T5J6 900 aaKnown RBP18.19■□□□□ 0.5
SCLT1-208ENST00000506368 BICC1Q9H694 974 aaKnown RBP18.19■□□□□ 0.5
SCLT1-208ENST00000506368 CCDC9Q9Y3X0 531 aaKnown RBP18.19■□□□□ 0.5
SCLT1-208ENST00000506368 CLIC4Q9Y696 253 aa18.19■□□□□ 0.5
SCLT1-208ENST00000506368 BIN1O00499 593 aa18.18■□□□□ 0.5
SCLT1-208ENST00000506368 KIF5CO60282 957 aa18.18■□□□□ 0.5
SCLT1-208ENST00000506368 ATP2B1P20020 1258 aa18.18■□□□□ 0.5
SCLT1-208ENST00000506368 CT47A1Q5JQC4 288 aaPredicted RBP18.18■□□□□ 0.5
SCLT1-208ENST00000506368 NBPF6Q5VWK0 638 aa18.18■□□□□ 0.5
SCLT1-208ENST00000506368 STOX1Q6ZVD7 989 aa18.18■□□□□ 0.5
SCLT1-208ENST00000506368 DPF2Q92785 391 aa18.18■□□□□ 0.5
SCLT1-208ENST00000506368 NBPF4Q96M43 638 aa18.18■□□□□ 0.5
SCLT1-208ENST00000506368 PANX2Q96RD6 677 aa18.18■□□□□ 0.5
SCLT1-208ENST00000506368 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.18■□□□□ 0.5
SCLT1-208ENST00000506368 PPFIA4O75335 1185 aa18.18■□□□□ 0.5
SCLT1-208ENST00000506368 TOM1L2Q6ZVM7 507 aa18.18■□□□□ 0.5
SCLT1-208ENST00000506368 TC2NQ8N9U0 490 aa18.18■□□□□ 0.5
SCLT1-208ENST00000506368 KBTBD3Q8NAB2 608 aa18.18■□□□□ 0.5
SCLT1-208ENST00000506368 ANKZF1Q9H8Y5 726 aa18.18■□□□□ 0.5
SCLT1-208ENST00000506368 NLRP2Q9NX02 1062 aa18.18■□□□□ 0.5
SCLT1-208ENST00000506368 WDR17Q8IZU2 1322 aa18.17■□□□□ 0.5
SCLT1-208ENST00000506368 EIF5P55010 431 aaKnown RBP18.17■□□□□ 0.5
SCLT1-208ENST00000506368 WHAMMP3Q1A5X7 153 aa18.17■□□□□ 0.5
SCLT1-208ENST00000506368 KAZALD1Q96I82 304 aa18.17■□□□□ 0.5
SCLT1-208ENST00000506368 EPC1Q9H2F5 836 aa18.17■□□□□ 0.5
SCLT1-208ENST00000506368 MYO1AQ9UBC5 1043 aa18.17■□□□□ 0.5
SCLT1-208ENST00000506368 HEG1Q9ULI3 1381 aa18.16■□□□□ 0.5
SCLT1-208ENST00000506368 FDPSP14324 419 aaKnown RBP18.16■□□□□ 0.5
SCLT1-208ENST00000506368 CCT2P78371 535 aaKnown RBP18.16■□□□□ 0.5
SCLT1-208ENST00000506368 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.16■□□□□ 0.5
SCLT1-208ENST00000506368 SPEF2Q9C093 1822 aa18.16■□□□□ 0.5
SCLT1-208ENST00000506368 A0A087WUV0 522 aaPredicted RBP18.16■□□□□ 0.5
SCLT1-208ENST00000506368 TEFQ10587 303 aa18.16■□□□□ 0.5
SCLT1-208ENST00000506368 TNNI3KQ59H18 835 aa18.16■□□□□ 0.5
SCLT1-208ENST00000506368 FAM177A1Q8N128 213 aaPredicted RBP18.16■□□□□ 0.5
SCLT1-208ENST00000506368 CEP89Q96ST8 783 aa18.16■□□□□ 0.5
SCLT1-208ENST00000506368 QTRT2Q9H974 415 aaKnown RBP18.16■□□□□ 0.5
SCLT1-208ENST00000506368 FPGT-TNNI3KV9GXZ4 949 aa18.16■□□□□ 0.5
SCLT1-208ENST00000506368 BTBD11A6QL63 1104 aa18.15■□□□□ 0.5
SCLT1-208ENST00000506368 MMP14P50281 582 aa18.15■□□□□ 0.5
SCLT1-208ENST00000506368 MCM6Q14566 821 aa18.15■□□□□ 0.5
SCLT1-208ENST00000506368 WDR93Q6P2C0 686 aa18.15■□□□□ 0.5
SCLT1-208ENST00000506368 POTEAQ6S8J7 498 aa18.15■□□□□ 0.5
SCLT1-208ENST00000506368 TRIML1Q8N9V2 468 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms