RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 PPP4CP60510 307 aa14.23□□□□□ -0.13
POLR2J3-211ENST00000506060 CUL4AQ13619 759 aa14.23□□□□□ -0.13
POLR2J3-211ENST00000506060 DOK7Q18PE1 504 aa14.23□□□□□ -0.13
POLR2J3-211ENST00000506060 STRIP1Q5VSL9 837 aa14.23□□□□□ -0.13
POLR2J3-211ENST00000506060 OLFM4Q6UX06 510 aa14.23□□□□□ -0.13
POLR2J3-211ENST00000506060 SLC51AQ86UW1 340 aa14.23□□□□□ -0.13
POLR2J3-211ENST00000506060 SPRYD3Q8NCJ5 442 aa14.23□□□□□ -0.13
POLR2J3-211ENST00000506060 FAM163AQ96GL9 167 aaPredicted RBP14.23□□□□□ -0.13
POLR2J3-211ENST00000506060 KRT23Q9C075 422 aa14.23□□□□□ -0.13
POLR2J3-211ENST00000506060 JAG2Q9Y219 1238 aa14.23□□□□□ -0.13
POLR2J3-211ENST00000506060 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.23□□□□□ -0.13
POLR2J3-211ENST00000506060 MYH2Q9UKX2 1941 aa14.23□□□□□ -0.13
POLR2J3-211ENST00000506060 PPIP5K2O43314 1243 aa14.22□□□□□ -0.13
POLR2J3-211ENST00000506060 ECE2O60344 883 aa14.22□□□□□ -0.13
POLR2J3-211ENST00000506060 HAND2P61296 217 aa14.22□□□□□ -0.13
POLR2J3-211ENST00000506060 MFSD6Q6ZSS7 791 aa14.22□□□□□ -0.13
POLR2J3-211ENST00000506060 NOL8Q76FK4 1167 aaKnown RBP14.22□□□□□ -0.13
POLR2J3-211ENST00000506060 ADGRA1Q86SQ6 560 aa14.22□□□□□ -0.13
POLR2J3-211ENST00000506060 AATFQ9NY61 560 aaKnown RBP eCLIP14.22□□□□□ -0.13
POLR2J3-211ENST00000506060 PPP1R1BQ9UD71 204 aaPredicted RBP14.22□□□□□ -0.13
POLR2J3-211ENST00000506060 USP17L3A6NCW0 530 aa14.21□□□□□ -0.13
POLR2J3-211ENST00000506060 USP17L4A6NCW7 530 aa14.21□□□□□ -0.13
POLR2J3-211ENST00000506060 KCNA3P22001 575 aa14.21□□□□□ -0.13
POLR2J3-211ENST00000506060 USP5P45974 858 aa14.21□□□□□ -0.13
POLR2J3-211ENST00000506060 DYNLL1P63167 89 aaKnown RBP14.21□□□□□ -0.13
POLR2J3-211ENST00000506060 AKNAD1Q5T1N1 836 aa14.21□□□□□ -0.13
POLR2J3-211ENST00000506060 USP17L1Q7RTZ2 530 aa14.21□□□□□ -0.13
POLR2J3-211ENST00000506060 EPB41L4AQ9HCS5 686 aaPredicted RBP14.21□□□□□ -0.13
POLR2J3-211ENST00000506060 ARPP21Q9UBL0 812 aaPredicted RBP14.21□□□□□ -0.13
POLR2J3-211ENST00000506060 CHD4Q14839 1912 aa14.21□□□□□ -0.14
POLR2J3-211ENST00000506060 GPR75-ASB3A0A0A6YYF3 556 aa14.2□□□□□ -0.14
POLR2J3-211ENST00000506060 PSDA5PKW4 1024 aaPredicted RBP14.2□□□□□ -0.14
POLR2J3-211ENST00000506060 PRKAB2O43741 272 aa14.2□□□□□ -0.14
POLR2J3-211ENST00000506060 PDIA4P13667 645 aaKnown RBP14.2□□□□□ -0.14
POLR2J3-211ENST00000506060 CPA1P15085 419 aa14.2□□□□□ -0.14
POLR2J3-211ENST00000506060 NUCB2P80303 420 aa14.2□□□□□ -0.14
POLR2J3-211ENST00000506060 EXOSC10Q01780 885 aaKnown RBP14.2□□□□□ -0.14
POLR2J3-211ENST00000506060 SART3Q15020 963 aaKnown RBP14.2□□□□□ -0.14
POLR2J3-211ENST00000506060 AOC3Q16853 763 aa14.2□□□□□ -0.14
POLR2J3-211ENST00000506060 Q6ZUG5 572 aa14.2□□□□□ -0.14
POLR2J3-211ENST00000506060 STOX1Q6ZVD7 989 aa14.2□□□□□ -0.14
POLR2J3-211ENST00000506060 FBXL16Q8N461 479 aa14.2□□□□□ -0.14
POLR2J3-211ENST00000506060 ZNF384Q8TF68 577 aa14.2□□□□□ -0.14
POLR2J3-211ENST00000506060 STAG1Q8WVM7 1258 aa14.2□□□□□ -0.14
POLR2J3-211ENST00000506060 MRIQ9BWK5 157 aa14.2□□□□□ -0.14
POLR2J3-211ENST00000506060 DBNDD1Q9H9R9 158 aa14.2□□□□□ -0.14
POLR2J3-211ENST00000506060 SPON1Q9HCB6 807 aa14.2□□□□□ -0.14
POLR2J3-211ENST00000506060 ANAPC4Q9UJX5 808 aa14.2□□□□□ -0.14
POLR2J3-211ENST00000506060 TAF6LQ9Y6J9 622 aa14.2□□□□□ -0.14
POLR2J3-211ENST00000506060 GAKO14976 1311 aa14.19□□□□□ -0.14
POLR2J3-211ENST00000506060 MYO3BQ8WXR4 1341 aa14.19□□□□□ -0.14
POLR2J3-211ENST00000506060 SNED1Q8TER0 1413 aa14.19□□□□□ -0.14
POLR2J3-211ENST00000506060 BTDP43251 543 aa14.19□□□□□ -0.14
POLR2J3-211ENST00000506060 HDLBPQ00341 1268 aaKnown RBP14.19□□□□□ -0.14
POLR2J3-211ENST00000506060 PPARAQ07869 468 aa14.19□□□□□ -0.14
POLR2J3-211ENST00000506060 DIXDC1Q155Q3 683 aa14.19□□□□□ -0.14
POLR2J3-211ENST00000506060 SBK1Q52WX2 424 aa14.19□□□□□ -0.14
POLR2J3-211ENST00000506060 HHIPL2Q6UWX4 724 aa14.19□□□□□ -0.14
POLR2J3-211ENST00000506060 KLHL34Q8N239 644 aa14.19□□□□□ -0.14
POLR2J3-211ENST00000506060 LARGE2Q8N3Y3 721 aa14.19□□□□□ -0.14
POLR2J3-211ENST00000506060 SDR42E1Q8WUS8 393 aa14.19□□□□□ -0.14
POLR2J3-211ENST00000506060 TEKT1Q969V4 418 aa14.19□□□□□ -0.14
POLR2J3-211ENST00000506060 TMEM87BQ96K49 555 aa14.19□□□□□ -0.14
POLR2J3-211ENST00000506060 SGIP1Q9BQI5 828 aa14.19□□□□□ -0.14
POLR2J3-211ENST00000506060 MTA3Q9BTC8 594 aa14.19□□□□□ -0.14
POLR2J3-211ENST00000506060 TTF2Q9UNY4 1162 aaKnown RBP14.19□□□□□ -0.14
POLR2J3-211ENST00000506060 MINDY4BA8MYZ0 360 aa14.18□□□□□ -0.14
POLR2J3-211ENST00000506060 PRC1O43663 620 aa14.18□□□□□ -0.14
POLR2J3-211ENST00000506060 NIM1KQ8IY84 436 aa14.18□□□□□ -0.14
POLR2J3-211ENST00000506060 MB21D2Q8IYB1 491 aaPredicted RBP14.18□□□□□ -0.14
POLR2J3-211ENST00000506060 TEX11Q8IYF3 940 aa14.18□□□□□ -0.14
POLR2J3-211ENST00000506060 ZNF287Q9HBT7 754 aa14.18□□□□□ -0.14
POLR2J3-211ENST00000506060 DCP1AQ9NPI6 582 aaPredicted RBP14.18□□□□□ -0.14
POLR2J3-211ENST00000506060 TOMM22Q9NS69 142 aa14.18□□□□□ -0.14
POLR2J3-211ENST00000506060 FOXD4L1Q9NU39 408 aa14.18□□□□□ -0.14
POLR2J3-211ENST00000506060 SMC3Q9UQE7 1217 aa14.18□□□□□ -0.14
POLR2J3-211ENST00000506060 TIAM2Q8IVF5 1701 aa14.18□□□□□ -0.14
POLR2J3-211ENST00000506060 ERICH2A1L162 156 aa14.17□□□□□ -0.14
POLR2J3-211ENST00000506060 PDE4BQ07343 736 aa14.17□□□□□ -0.14
POLR2J3-211ENST00000506060 TOB2Q14106 344 aaPredicted RBP14.17□□□□□ -0.14
POLR2J3-211ENST00000506060 TBC1D10CQ8IV04 446 aa14.17□□□□□ -0.14
POLR2J3-211ENST00000506060 TMTC2Q8N394 836 aa14.17□□□□□ -0.14
POLR2J3-211ENST00000506060 ESR2Q92731 530 aa14.17□□□□□ -0.14
POLR2J3-211ENST00000506060 BRF1Q92994 677 aa14.17□□□□□ -0.14
POLR2J3-211ENST00000506060 ZNF274Q96GC6 653 aaPredicted RBP14.17□□□□□ -0.14
POLR2J3-211ENST00000506060 AGXT2Q9BYV1 514 aa14.17□□□□□ -0.14
POLR2J3-211ENST00000506060 MCM9Q9NXL9 1143 aa14.17□□□□□ -0.14
POLR2J3-211ENST00000506060 KIF3AQ9Y496 699 aa14.17□□□□□ -0.14
POLR2J3-211ENST00000506060 USP17L12C9JPN9 530 aa14.16□□□□□ -0.14
POLR2J3-211ENST00000506060 USP17L21D6R901 530 aa14.16□□□□□ -0.14
POLR2J3-211ENST00000506060 DHX16O60231 1041 aaKnown RBP14.16□□□□□ -0.14
POLR2J3-211ENST00000506060 DDIT3P35638 169 aa14.16□□□□□ -0.14
POLR2J3-211ENST00000506060 IARSP41252 1262 aaKnown RBP14.16□□□□□ -0.14
POLR2J3-211ENST00000506060 PTGER2P43116 358 aa14.16□□□□□ -0.14
POLR2J3-211ENST00000506060 CTDSPL2Q05D32 466 aa14.16□□□□□ -0.14
POLR2J3-211ENST00000506060 CTR9Q6PD62 1173 aa14.16□□□□□ -0.14
POLR2J3-211ENST00000506060 SH3RF3Q8TEJ3 882 aaPredicted RBP14.16□□□□□ -0.14
POLR2J3-211ENST00000506060 JDP2Q8WYK2 163 aa14.16□□□□□ -0.14
POLR2J3-211ENST00000506060 TCEANC2Q96MN5 208 aa14.16□□□□□ -0.14
POLR2J3-211ENST00000506060 TAOK3Q9H2K8 898 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms