RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 CEP41Q9BYV8 373 aa9.41□□□□□ -0.9
NIPBL-205ENST00000505998 KRT82Q9NSB4 513 aa9.41□□□□□ -0.9
NIPBL-205ENST00000505998 E9PSI1 815 aa9.4□□□□□ -0.9
NIPBL-205ENST00000505998 SCAMP3O14828 347 aaKnown RBP9.4□□□□□ -0.9
NIPBL-205ENST00000505998 ZNF76P36508 570 aa9.4□□□□□ -0.9
NIPBL-205ENST00000505998 RPS26P62854 115 aaKnown RBP9.4□□□□□ -0.9
NIPBL-205ENST00000505998 ZNF252P-AS1Q0IIN9 211 aa9.4□□□□□ -0.9
NIPBL-205ENST00000505998 ANKRD34AQ69YU3 496 aa9.4□□□□□ -0.9
NIPBL-205ENST00000505998 RELL1Q8IUW5 271 aa9.4□□□□□ -0.9
NIPBL-205ENST00000505998 METTL5Q9NRN9 209 aaKnown RBP9.4□□□□□ -0.9
NIPBL-205ENST00000505998 LIG1P18858 919 aa9.39□□□□□ -0.91
NIPBL-205ENST00000505998 PWP1Q13610 501 aa9.39□□□□□ -0.91
NIPBL-205ENST00000505998 RASIP1Q5U651 963 aa9.39□□□□□ -0.91
NIPBL-205ENST00000505998 C12orf50Q8NA57 414 aaPredicted RBP9.39□□□□□ -0.91
NIPBL-205ENST00000505998 SMG8Q8ND04 991 aaKnown RBP9.39□□□□□ -0.91
NIPBL-205ENST00000505998 ACSBG1Q96GR2 724 aa9.39□□□□□ -0.91
NIPBL-205ENST00000505998 RSRP1Q9BUV0 290 aa9.39□□□□□ -0.91
NIPBL-205ENST00000505998 GGT7Q9UJ14 662 aa9.39□□□□□ -0.91
NIPBL-205ENST00000505998 SART1O43290 800 aaKnown RBP9.38□□□□□ -0.91
NIPBL-205ENST00000505998 TRIM37O94972 964 aa9.38□□□□□ -0.91
NIPBL-205ENST00000505998 AGMOQ6ZNB7 445 aa9.38□□□□□ -0.91
NIPBL-205ENST00000505998 Q6ZS46 218 aa9.38□□□□□ -0.91
NIPBL-205ENST00000505998 RNF34Q969K3 372 aa9.38□□□□□ -0.91
NIPBL-205ENST00000505998 SUGCTQ9HAC7 445 aa9.38□□□□□ -0.91
NIPBL-205ENST00000505998 F6X3S4 739 aa9.37□□□□□ -0.91
NIPBL-205ENST00000505998 ZNF862O60290 1169 aa9.37□□□□□ -0.91
NIPBL-205ENST00000505998 AOC2O75106 756 aa9.37□□□□□ -0.91
NIPBL-205ENST00000505998 ITGB2P05107 769 aa9.37□□□□□ -0.91
NIPBL-205ENST00000505998 SLFN14P0C7P3 912 aa9.37□□□□□ -0.91
NIPBL-205ENST00000505998 GBP2P32456 591 aaPredicted RBP9.37□□□□□ -0.91
NIPBL-205ENST00000505998 FANCCQ00597 558 aa9.37□□□□□ -0.91
NIPBL-205ENST00000505998 AKAP4Q5JQC9 854 aa9.37□□□□□ -0.91
NIPBL-205ENST00000505998 SCARA3Q6AZY7 606 aa9.37□□□□□ -0.91
NIPBL-205ENST00000505998 GPBAR1Q8TDU6 330 aa9.37□□□□□ -0.91
NIPBL-205ENST00000505998 MEGF10Q96KG7 1140 aa9.37□□□□□ -0.91
NIPBL-205ENST00000505998 WDR18Q9BV38 432 aa9.37□□□□□ -0.91
NIPBL-205ENST00000505998 TLR6Q9Y2C9 796 aa9.37□□□□□ -0.91
NIPBL-205ENST00000505998 MPRIPQ6WCQ1 1025 aa9.36□□□□□ -0.91
NIPBL-205ENST00000505998 ERMP1Q7Z2K6 904 aa9.36□□□□□ -0.91
NIPBL-205ENST00000505998 PHC3Q8NDX5 983 aa9.36□□□□□ -0.91
NIPBL-205ENST00000505998 WDR89Q96FK6 387 aaPredicted RBP9.36□□□□□ -0.91
NIPBL-205ENST00000505998 TMEM74Q96NL1 305 aa9.36□□□□□ -0.91
NIPBL-205ENST00000505998 KBTBD4Q9NVX7 518 aa9.36□□□□□ -0.91
NIPBL-205ENST00000505998 MINDY4BA8MYZ0 360 aa9.35□□□□□ -0.91
NIPBL-205ENST00000505998 ADH5P11766 374 aa9.35□□□□□ -0.91
NIPBL-205ENST00000505998 TFE3P19532 575 aaPredicted RBP9.35□□□□□ -0.91
NIPBL-205ENST00000505998 KIF4BQ2VIQ3 1234 aa9.35□□□□□ -0.91
NIPBL-205ENST00000505998 UBL7Q96S82 380 aaPredicted RBP9.35□□□□□ -0.91
NIPBL-205ENST00000505998 MIR1-1HGQ9H1L0 117 aa9.35□□□□□ -0.91
NIPBL-205ENST00000505998 COPRSQ9NQ92 184 aa9.35□□□□□ -0.91
NIPBL-205ENST00000505998 AP4E1Q9UPM8 1137 aa9.35□□□□□ -0.91
NIPBL-205ENST00000505998 PCDHB5Q9Y5E4 795 aa9.35□□□□□ -0.91
NIPBL-205ENST00000505998 SYNGAP1Q96PV0 1343 aa9.34□□□□□ -0.91
NIPBL-205ENST00000505998 GAS2O43903 313 aaKnown RBP9.34□□□□□ -0.91
NIPBL-205ENST00000505998 TIAF1O95411 115 aa9.34□□□□□ -0.91
NIPBL-205ENST00000505998 DRD2P14416 443 aa9.34□□□□□ -0.91
NIPBL-205ENST00000505998 PREPP48147 710 aa9.34□□□□□ -0.91
NIPBL-205ENST00000505998 SOX4Q06945 474 aaPredicted RBP9.34□□□□□ -0.91
NIPBL-205ENST00000505998 GPAT2Q6NUI2 795 aa9.34□□□□□ -0.91
NIPBL-205ENST00000505998 DZIP1LQ8IYY4 767 aaKnown RBP9.34□□□□□ -0.91
NIPBL-205ENST00000505998 CACNA2D2Q9NY47 1150 aa9.34□□□□□ -0.91
NIPBL-205ENST00000505998 PCDHA4Q9UN74 947 aa9.34□□□□□ -0.91
NIPBL-205ENST00000505998 MSTNO14793 375 aa9.33□□□□□ -0.92
NIPBL-205ENST00000505998 SEPT6Q14141 434 aa9.33□□□□□ -0.92
NIPBL-205ENST00000505998 UVSSAQ2YD98 709 aa9.33□□□□□ -0.92
NIPBL-205ENST00000505998 DIEXFQ68CQ4 756 aaKnown RBP9.33□□□□□ -0.92
NIPBL-205ENST00000505998 DYMQ7RTS9 669 aa9.33□□□□□ -0.92
NIPBL-205ENST00000505998 FAM46AQ96IP4 442 aaKnown RBP9.33□□□□□ -0.92
NIPBL-205ENST00000505998 PF4P02776 101 aa9.32□□□□□ -0.92
NIPBL-205ENST00000505998 HDLBPQ00341 1268 aaKnown RBP9.32□□□□□ -0.92
NIPBL-205ENST00000505998 ID3Q02535 119 aa9.32□□□□□ -0.92
NIPBL-205ENST00000505998 LMNB2Q03252 620 aa9.32□□□□□ -0.92
NIPBL-205ENST00000505998 CAMK2GQ13555 558 aaPredicted RBP9.32□□□□□ -0.92
NIPBL-205ENST00000505998 TRIM42Q8IWZ5 723 aa9.32□□□□□ -0.92
NIPBL-205ENST00000505998 JARID2Q92833 1246 aaPredicted RBP9.32□□□□□ -0.92
NIPBL-205ENST00000505998 UTP4Q969X6 686 aaKnown RBP9.32□□□□□ -0.92
NIPBL-205ENST00000505998 GAL3ST3Q96A11 431 aa9.32□□□□□ -0.92
NIPBL-205ENST00000505998 TP53INP1Q96A56 240 aa9.32□□□□□ -0.92
NIPBL-205ENST00000505998 RHOVQ96L33 236 aa9.32□□□□□ -0.92
NIPBL-205ENST00000505998 SPOCK3Q9BQ16 436 aa9.32□□□□□ -0.92
NIPBL-205ENST00000505998 SSBP4Q9BWG4 385 aaPredicted RBP9.32□□□□□ -0.92
NIPBL-205ENST00000505998 TMPRSS2O15393 492 aa9.31□□□□□ -0.92
NIPBL-205ENST00000505998 PTPN11Q06124 597 aaPredicted RBP9.31□□□□□ -0.92
NIPBL-205ENST00000505998 SNAP47Q5SQN1 464 aa9.31□□□□□ -0.92
NIPBL-205ENST00000505998 C9orf131Q5VYM1 1079 aa9.31□□□□□ -0.92
NIPBL-205ENST00000505998 USP48Q86UV5 1035 aa9.31□□□□□ -0.92
NIPBL-205ENST00000505998 C2CD4AQ8NCU7 369 aaPredicted RBP9.31□□□□□ -0.92
NIPBL-205ENST00000505998 PPP1R9AQ9ULJ8 1098 aa9.31□□□□□ -0.92
NIPBL-205ENST00000505998 IGHA1P01876 353 aa9.3□□□□□ -0.92
NIPBL-205ENST00000505998 PROCP04070 461 aa9.3□□□□□ -0.92
NIPBL-205ENST00000505998 TCF3P15923 654 aa9.3□□□□□ -0.92
NIPBL-205ENST00000505998 USP11P51784 963 aa9.3□□□□□ -0.92
NIPBL-205ENST00000505998 FAM160A1Q05DH4 1040 aa9.3□□□□□ -0.92
NIPBL-205ENST00000505998 METTL16Q86W50 562 aaKnown RBP9.3□□□□□ -0.92
NIPBL-205ENST00000505998 ATXN3LQ9H3M9 355 aa9.3□□□□□ -0.92
NIPBL-205ENST00000505998 TPSG1Q9NRR2 321 aa9.3□□□□□ -0.92
NIPBL-205ENST00000505998 CRIM1Q9NZV1 1036 aa9.3□□□□□ -0.92
NIPBL-205ENST00000505998 PCDHGC5Q9Y5F6 944 aa9.3□□□□□ -0.92
NIPBL-205ENST00000505998 ACTL7BQ9Y614 415 aa9.3□□□□□ -0.92
NIPBL-205ENST00000505998 EIF4A3P38919 411 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms