RNA–Protein interactions for RNA: ENST00000505814.5

PTPN20-215, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-215ENST00000505814 ECM29Q5VYK3 1845 aa11.33□□□□□ -0.6
PTPN20-215ENST00000505814 SHTN1A0MZ66 631 aa11.33□□□□□ -0.6
PTPN20-215ENST00000505814 DACT2Q5SW24 774 aa11.33□□□□□ -0.6
PTPN20-215ENST00000505814 ATF7IPQ6VMQ6 1270 aa11.33□□□□□ -0.6
PTPN20-215ENST00000505814 Q6ZNB5 142 aa11.33□□□□□ -0.6
PTPN20-215ENST00000505814 ZC3H15Q8WU90 426 aaKnown RBP11.33□□□□□ -0.6
PTPN20-215ENST00000505814 ZNF594Q96JF6 807 aaPredicted RBP11.33□□□□□ -0.6
PTPN20-215ENST00000505814 COA1Q9GZY4 146 aa11.33□□□□□ -0.6
PTPN20-215ENST00000505814 GJA3Q9Y6H8 435 aa11.33□□□□□ -0.6
PTPN20-215ENST00000505814 SNAP23O00161 211 aa11.32□□□□□ -0.6
PTPN20-215ENST00000505814 EGFRP00533 1210 aa11.32□□□□□ -0.6
PTPN20-215ENST00000505814 IL1R1P14778 569 aa11.32□□□□□ -0.6
PTPN20-215ENST00000505814 FECHP22830 423 aa11.32□□□□□ -0.6
PTPN20-215ENST00000505814 PTPN12Q05209 780 aaKnown RBP11.32□□□□□ -0.6
PTPN20-215ENST00000505814 RSBN1LQ6PCB5 846 aaPredicted RBP11.32□□□□□ -0.6
PTPN20-215ENST00000505814 AGBL3Q8NEM8 1001 aa11.32□□□□□ -0.6
PTPN20-215ENST00000505814 MPHOSPH8Q99549 860 aa11.32□□□□□ -0.6
PTPN20-215ENST00000505814 MEIS3Q99687 375 aa11.32□□□□□ -0.6
PTPN20-215ENST00000505814 PUS3Q9BZE2 481 aaKnown RBP11.32□□□□□ -0.6
PTPN20-215ENST00000505814 GPR37O15354 613 aa11.31□□□□□ -0.6
PTPN20-215ENST00000505814 GFRA3O60609 400 aa11.31□□□□□ -0.6
PTPN20-215ENST00000505814 FGFR2P21802 821 aa11.31□□□□□ -0.6
PTPN20-215ENST00000505814 LMOD1P29536 600 aaPredicted RBP11.31□□□□□ -0.6
PTPN20-215ENST00000505814 CCDC57Q2TAC2 916 aa11.31□□□□□ -0.6
PTPN20-215ENST00000505814 STRIP1Q5VSL9 837 aa11.31□□□□□ -0.6
PTPN20-215ENST00000505814 LDHAL6AQ6ZMR3 332 aa11.31□□□□□ -0.6
PTPN20-215ENST00000505814 ATG9AQ7Z3C6 839 aa11.31□□□□□ -0.6
PTPN20-215ENST00000505814 ZBED3Q96IU2 234 aaPredicted RBP11.31□□□□□ -0.6
PTPN20-215ENST00000505814 CNOT7Q9UIV1 285 aaKnown RBP11.31□□□□□ -0.6
PTPN20-215ENST00000505814 MROH5Q6ZUA9 1318 aa11.31□□□□□ -0.6
PTPN20-215ENST00000505814 COL1A1P02452 1464 aaPredicted RBP11.31□□□□□ -0.6
PTPN20-215ENST00000505814 USP17L3A6NCW0 530 aa11.3□□□□□ -0.6
PTPN20-215ENST00000505814 USP17L4A6NCW7 530 aa11.3□□□□□ -0.6
PTPN20-215ENST00000505814 FKBP1AP62942 108 aaKnown RBP11.3□□□□□ -0.6
PTPN20-215ENST00000505814 UBE4AQ14139 1066 aa11.3□□□□□ -0.6
PTPN20-215ENST00000505814 LRRC24Q50LG9 513 aa11.3□□□□□ -0.6
PTPN20-215ENST00000505814 USP17L1Q7RTZ2 530 aa11.3□□□□□ -0.6
PTPN20-215ENST00000505814 CD209Q9NNX6 404 aa11.3□□□□□ -0.6
PTPN20-215ENST00000505814 LAMB1P07942 1786 aa11.3□□□□□ -0.6
PTPN20-215ENST00000505814 PAPPA2Q9BXP8 1791 aa11.3□□□□□ -0.6
PTPN20-215ENST00000505814 FAM205AQ6ZU69 1335 aa11.3□□□□□ -0.6
PTPN20-215ENST00000505814 MYO3BQ8WXR4 1341 aa11.3□□□□□ -0.6
PTPN20-215ENST00000505814 CNTNAP1P78357 1384 aa11.29□□□□□ -0.6
PTPN20-215ENST00000505814 TAF5LO75529 589 aa11.29□□□□□ -0.6
PTPN20-215ENST00000505814 CIAO1O76071 339 aa11.29□□□□□ -0.6
PTPN20-215ENST00000505814 UBTFL1P0CB47 393 aaPredicted RBP11.29□□□□□ -0.6
PTPN20-215ENST00000505814 MMP14P50281 582 aa11.29□□□□□ -0.6
PTPN20-215ENST00000505814 MLLT1Q03111 559 aaPredicted RBP11.29□□□□□ -0.6
PTPN20-215ENST00000505814 MAP1SQ66K74 1059 aaPredicted RBP11.29□□□□□ -0.6
PTPN20-215ENST00000505814 CNTROBQ8N137 903 aa11.29□□□□□ -0.6
PTPN20-215ENST00000505814 CERS5Q8N5B7 392 aa11.29□□□□□ -0.6
PTPN20-215ENST00000505814 COPRSQ9NQ92 184 aa11.29□□□□□ -0.6
PTPN20-215ENST00000505814 LRRFIP2Q9Y608 721 aaKnown RBP11.29□□□□□ -0.6
PTPN20-215ENST00000505814 EYA2O00167 538 aa11.28□□□□□ -0.6
PTPN20-215ENST00000505814 IPO8O15397 1037 aaKnown RBP11.28□□□□□ -0.6
PTPN20-215ENST00000505814 NR1I2O75469 434 aa11.28□□□□□ -0.6
PTPN20-215ENST00000505814 PDE8BO95263 885 aa11.28□□□□□ -0.6
PTPN20-215ENST00000505814 RLBP1P12271 317 aa11.28□□□□□ -0.6
PTPN20-215ENST00000505814 EAPPQ56P03 285 aaPredicted RBP11.28□□□□□ -0.6
PTPN20-215ENST00000505814 ZKSCAN2Q63HK3 967 aa11.28□□□□□ -0.6
PTPN20-215ENST00000505814 FBXO33Q7Z6M2 555 aa11.28□□□□□ -0.6
PTPN20-215ENST00000505814 GPIHBP1Q8IV16 184 aa11.28□□□□□ -0.6
PTPN20-215ENST00000505814 TMEM57Q8N5G2 664 aa11.28□□□□□ -0.6
PTPN20-215ENST00000505814 HELBQ8NG08 1087 aaPredicted RBP11.28□□□□□ -0.6
PTPN20-215ENST00000505814 TDRD7Q8NHU6 1098 aaKnown RBP11.28□□□□□ -0.6
PTPN20-215ENST00000505814 KLHDC4Q8TBB5 520 aa11.28□□□□□ -0.6
PTPN20-215ENST00000505814 FAM84BQ96KN1 310 aaPredicted RBP11.28□□□□□ -0.6
PTPN20-215ENST00000505814 DAXXQ9UER7 740 aaPredicted RBP11.28□□□□□ -0.6
PTPN20-215ENST00000505814 PITPNM2Q9BZ72 1349 aa11.28□□□□□ -0.6
PTPN20-215ENST00000505814 MYH13Q9UKX3 1938 aa11.27□□□□□ -0.6
PTPN20-215ENST00000505814 RASSF10A6NK89 507 aa11.27□□□□□ -0.61
PTPN20-215ENST00000505814 GNAI3P08754 354 aa11.27□□□□□ -0.61
PTPN20-215ENST00000505814 MTMR14Q8NCE2 650 aa11.27□□□□□ -0.61
PTPN20-215ENST00000505814 CNNM1Q9NRU3 951 aa11.27□□□□□ -0.61
PTPN20-215ENST00000505814 CHMP3Q9Y3E7 222 aa11.27□□□□□ -0.61
PTPN20-215ENST00000505814 TLL1O43897 1013 aa11.26□□□□□ -0.61
PTPN20-215ENST00000505814 FMR1Q06787 632 aaKnown RBP eCLIP11.26□□□□□ -0.61
PTPN20-215ENST00000505814 KIF4BQ2VIQ3 1234 aa11.26□□□□□ -0.61
PTPN20-215ENST00000505814 CST9Q5W186 159 aa11.26□□□□□ -0.61
PTPN20-215ENST00000505814 MXD3Q9BW11 206 aa11.26□□□□□ -0.61
PTPN20-215ENST00000505814 ASTN2O75129 1339 aaPredicted RBP11.26□□□□□ -0.61
PTPN20-215ENST00000505814 SSC5DA1L4H1 1573 aa11.25□□□□□ -0.61
PTPN20-215ENST00000505814 TMEM88BA6NKF7 163 aa11.25□□□□□ -0.61
PTPN20-215ENST00000505814 RNF223E7ERA6 249 aa11.25□□□□□ -0.61
PTPN20-215ENST00000505814 H7C1D1 291 aa11.25□□□□□ -0.61
PTPN20-215ENST00000505814 TULP1O00294 542 aaPredicted RBP11.25□□□□□ -0.61
PTPN20-215ENST00000505814 TRAF5O00463 557 aa11.25□□□□□ -0.61
PTPN20-215ENST00000505814 SASH1O94885 1247 aa11.25□□□□□ -0.61
PTPN20-215ENST00000505814 USP17L8P0C7I0 530 aa11.25□□□□□ -0.61
PTPN20-215ENST00000505814 TBC1D10BQ4KMP7 808 aaPredicted RBP11.25□□□□□ -0.61
PTPN20-215ENST00000505814 ZNF804AQ7Z570 1209 aa11.25□□□□□ -0.61
PTPN20-215ENST00000505814 GLIS2Q9BZE0 524 aaPredicted RBP11.25□□□□□ -0.61
PTPN20-215ENST00000505814 MYOZ2Q9NPC6 264 aa11.25□□□□□ -0.61
PTPN20-215ENST00000505814 HDAC5Q9UQL6 1122 aa11.25□□□□□ -0.61
PTPN20-215ENST00000505814 POLR2AP24928 1970 aaKnown RBP11.25□□□□□ -0.61
PTPN20-215ENST00000505814 ZBTB7BO15156 539 aaPredicted RBP11.24□□□□□ -0.61
PTPN20-215ENST00000505814 PUM3Q15397 648 aaKnown RBP11.24□□□□□ -0.61
PTPN20-215ENST00000505814 TAF7LQ5H9L4 462 aa11.24□□□□□ -0.61
PTPN20-215ENST00000505814 TTLL5Q6EMB2 1281 aa11.24□□□□□ -0.61
PTPN20-215ENST00000505814 SCUBE3Q8IX30 993 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms