RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 ORC1Q13415 861 aa5.77□□□□□ -1.49
TRAPPC13-208ENST00000505553 TTC39BQ5VTQ0 682 aaPredicted RBP5.77□□□□□ -1.49
TRAPPC13-208ENST00000505553 HS2ST1Q7LGA3 356 aa5.77□□□□□ -1.49
TRAPPC13-208ENST00000505553 METTL22Q9BUU2 404 aaPredicted RBP5.77□□□□□ -1.49
TRAPPC13-208ENST00000505553 BSDC1Q9NW68 430 aaPredicted RBP5.77□□□□□ -1.49
TRAPPC13-208ENST00000505553 KCNK4Q9NYG8 393 aa5.77□□□□□ -1.49
TRAPPC13-208ENST00000505553 INPP5FQ9Y2H2 1132 aa5.77□□□□□ -1.49
TRAPPC13-208ENST00000505553 PPM1GO15355 546 aaPredicted RBP5.76□□□□□ -1.49
TRAPPC13-208ENST00000505553 DNAJA1P31689 397 aaKnown RBP5.76□□□□□ -1.49
TRAPPC13-208ENST00000505553 HYAL2Q12891 473 aa5.76□□□□□ -1.49
TRAPPC13-208ENST00000505553 FLCNQ8NFG4 579 aa5.76□□□□□ -1.49
TRAPPC13-208ENST00000505553 DNAJC2Q99543 621 aaKnown RBP5.76□□□□□ -1.49
TRAPPC13-208ENST00000505553 DDX41Q9UJV9 622 aaKnown RBP5.76□□□□□ -1.49
TRAPPC13-208ENST00000505553 GAS2O43903 313 aaKnown RBP5.75□□□□□ -1.49
TRAPPC13-208ENST00000505553 CTSHP09668 335 aa5.75□□□□□ -1.49
TRAPPC13-208ENST00000505553 CDC27P30260 824 aa5.75□□□□□ -1.49
TRAPPC13-208ENST00000505553 PTPN12Q05209 780 aaKnown RBP5.75□□□□□ -1.49
TRAPPC13-208ENST00000505553 TRIP4Q15650 581 aaPredicted RBP5.75□□□□□ -1.49
TRAPPC13-208ENST00000505553 USP48Q86UV5 1035 aa5.75□□□□□ -1.49
TRAPPC13-208ENST00000505553 KSR1Q8IVT5 923 aa5.75□□□□□ -1.49
TRAPPC13-208ENST00000505553 FBXL6Q8N531 539 aa5.75□□□□□ -1.49
TRAPPC13-208ENST00000505553 OR13H1Q8NG92 308 aa5.75□□□□□ -1.49
TRAPPC13-208ENST00000505553 DHX38Q92620 1227 aaKnown RBP5.75□□□□□ -1.49
TRAPPC13-208ENST00000505553 HIRIP3Q9BW71 556 aaPredicted RBP5.75□□□□□ -1.49
TRAPPC13-208ENST00000505553 LNPKQ9C0E8 428 aa5.75□□□□□ -1.49
TRAPPC13-208ENST00000505553 RNF208Q9H0X6 261 aa5.75□□□□□ -1.49
TRAPPC13-208ENST00000505553 GGNBP2Q9H3C7 697 aa5.75□□□□□ -1.49
TRAPPC13-208ENST00000505553 FAM177BA6PVY3 158 aa5.74□□□□□ -1.49
TRAPPC13-208ENST00000505553 KRTAP9-7A8MTY7 169 aa5.74□□□□□ -1.49
TRAPPC13-208ENST00000505553 FSCN2O14926 492 aa5.74□□□□□ -1.49
TRAPPC13-208ENST00000505553 SMNDC1O75940 238 aaKnown RBP eCLIP5.74□□□□□ -1.49
TRAPPC13-208ENST00000505553 PAPLNO95428 1278 aa5.74□□□□□ -1.49
TRAPPC13-208ENST00000505553 F13BP05160 661 aa5.74□□□□□ -1.49
TRAPPC13-208ENST00000505553 MAP4P27816 1152 aaKnown RBP5.74□□□□□ -1.49
TRAPPC13-208ENST00000505553 PREPP48147 710 aa5.74□□□□□ -1.49
TRAPPC13-208ENST00000505553 TNNI2P48788 182 aa5.74□□□□□ -1.49
TRAPPC13-208ENST00000505553 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.74□□□□□ -1.49
TRAPPC13-208ENST00000505553 FDX2Q6P4F2 183 aa5.74□□□□□ -1.49
TRAPPC13-208ENST00000505553 GIMAP6Q6P9H5 292 aa5.74□□□□□ -1.49
TRAPPC13-208ENST00000505553 TXNDC11Q6PKC3 985 aa5.74□□□□□ -1.49
TRAPPC13-208ENST00000505553 XKR5Q6UX68 686 aa5.74□□□□□ -1.49
TRAPPC13-208ENST00000505553 SLC38A3Q99624 504 aa5.74□□□□□ -1.49
TRAPPC13-208ENST00000505553 SRCIN1Q9C0H9 1055 aa5.74□□□□□ -1.49
TRAPPC13-208ENST00000505553 C12orf49Q9H741 205 aa5.74□□□□□ -1.49
TRAPPC13-208ENST00000505553 GGT7Q9UJ14 662 aa5.74□□□□□ -1.49
TRAPPC13-208ENST00000505553 TMA7Q9Y2S6 64 aaKnown RBP5.74□□□□□ -1.49
TRAPPC13-208ENST00000505553 USP31Q70CQ4 1352 aa5.74□□□□□ -1.49
TRAPPC13-208ENST00000505553 RBL2Q08999 1139 aa5.74□□□□□ -1.49
TRAPPC13-208ENST00000505553 TAF1CQ15572 869 aaPredicted RBP5.74□□□□□ -1.49
TRAPPC13-208ENST00000505553 CEP135Q66GS9 1140 aa5.74□□□□□ -1.49
TRAPPC13-208ENST00000505553 NFXL1Q6ZNB6 911 aa5.74□□□□□ -1.49
TRAPPC13-208ENST00000505553 CARD10Q9BWT7 1032 aa5.74□□□□□ -1.49
TRAPPC13-208ENST00000505553 FAM8A1Q9UBU6 413 aa5.74□□□□□ -1.49
TRAPPC13-208ENST00000505553 CYP26A1O43174 497 aa5.73□□□□□ -1.49
TRAPPC13-208ENST00000505553 RXRBP28702 533 aa5.73□□□□□ -1.49
TRAPPC13-208ENST00000505553 ST13P50502 369 aaKnown RBP5.73□□□□□ -1.49
TRAPPC13-208ENST00000505553 RACK1P63244 317 aaKnown RBP5.73□□□□□ -1.49
TRAPPC13-208ENST00000505553 ZNF394Q53GI3 561 aa5.73□□□□□ -1.49
TRAPPC13-208ENST00000505553 PDE12Q6L8Q7 609 aaKnown RBP5.73□□□□□ -1.49
TRAPPC13-208ENST00000505553 SNX29Q8TEQ0 813 aa5.73□□□□□ -1.49
TRAPPC13-208ENST00000505553 UBASH3BQ8TF42 649 aa5.73□□□□□ -1.49
TRAPPC13-208ENST00000505553 CCDC74AQ96AQ1 378 aa5.73□□□□□ -1.49
TRAPPC13-208ENST00000505553 LACRTQ9GZZ8 138 aa5.73□□□□□ -1.49
TRAPPC13-208ENST00000505553 SEC31BQ9NQW1 1179 aa5.73□□□□□ -1.49
TRAPPC13-208ENST00000505553 ABI2Q9NYB9 513 aaPredicted RBP5.73□□□□□ -1.49
TRAPPC13-208ENST00000505553 ANKRD62A6NC57 917 aa5.72□□□□□ -1.49
TRAPPC13-208ENST00000505553 TNFRSF21O75509 655 aa5.72□□□□□ -1.49
TRAPPC13-208ENST00000505553 CCDC144BQ3MJ40 725 aa5.72□□□□□ -1.49
TRAPPC13-208ENST00000505553 COL13A1Q5TAT6 717 aaPredicted RBP5.72□□□□□ -1.49
TRAPPC13-208ENST00000505553 NCAPG2Q86XI2 1143 aa5.72□□□□□ -1.49
TRAPPC13-208ENST00000505553 PAK6Q9NQU5 681 aaPredicted RBP5.72□□□□□ -1.49
TRAPPC13-208ENST00000505553 TLDC2A0PJX2 215 aa5.71□□□□□ -1.5
TRAPPC13-208ENST00000505553 A6NHS1 94 aa5.71□□□□□ -1.5
TRAPPC13-208ENST00000505553 PRRG2O14669 202 aa5.71□□□□□ -1.5
TRAPPC13-208ENST00000505553 STK10O94804 968 aaKnown RBP5.71□□□□□ -1.5
TRAPPC13-208ENST00000505553 ZNF865P0CJ78 1059 aaPredicted RBP5.71□□□□□ -1.5
TRAPPC13-208ENST00000505553 CDC25BP30305 580 aa5.71□□□□□ -1.5
TRAPPC13-208ENST00000505553 ATP11AP98196 1134 aa5.71□□□□□ -1.5
TRAPPC13-208ENST00000505553 ZNF438Q7Z4V0 828 aa5.71□□□□□ -1.5
TRAPPC13-208ENST00000505553 ANKRD13AQ8IZ07 590 aa5.71□□□□□ -1.5
TRAPPC13-208ENST00000505553 RUSC1Q9BVN2 902 aa5.71□□□□□ -1.5
TRAPPC13-208ENST00000505553 OSBPL7Q9BZF2 842 aa5.71□□□□□ -1.5
TRAPPC13-208ENST00000505553 ZFYVE28Q9HCC9 887 aa5.71□□□□□ -1.5
TRAPPC13-208ENST00000505553 PCDHGB7Q9Y5F8 929 aa5.71□□□□□ -1.5
TRAPPC13-208ENST00000505553 NCANO14594 1321 aa5.71□□□□□ -1.5
TRAPPC13-208ENST00000505553 TM4SF5O14894 197 aa5.7□□□□□ -1.5
TRAPPC13-208ENST00000505553 DDX3YO15523 660 aaKnown RBP5.7□□□□□ -1.5
TRAPPC13-208ENST00000505553 PHACTR2O75167 634 aa5.7□□□□□ -1.5
TRAPPC13-208ENST00000505553 GJA8P48165 433 aa5.7□□□□□ -1.5
TRAPPC13-208ENST00000505553 LILRA6Q6PI73 481 aa5.7□□□□□ -1.5
TRAPPC13-208ENST00000505553 PAOXQ6QHF9 649 aa5.7□□□□□ -1.5
TRAPPC13-208ENST00000505553 PMFBP1Q8TBY8 1022 aa5.7□□□□□ -1.5
TRAPPC13-208ENST00000505553 EPS8L3Q8TE67 593 aaKnown RBP5.7□□□□□ -1.5
TRAPPC13-208ENST00000505553 WNT8BQ93098 351 aa5.7□□□□□ -1.5
TRAPPC13-208ENST00000505553 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.7□□□□□ -1.5
TRAPPC13-208ENST00000505553 PBX4Q9BYU1 374 aa5.7□□□□□ -1.5
TRAPPC13-208ENST00000505553 RASSF4Q9H2L5 321 aa5.7□□□□□ -1.5
TRAPPC13-208ENST00000505553 ELP3Q9H9T3 547 aa5.7□□□□□ -1.5
TRAPPC13-208ENST00000505553 PPP4R2Q9NY27 417 aa5.7□□□□□ -1.5
TRAPPC13-208ENST00000505553 ADAM11O75078 769 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms