RNA–Protein interactions for RNA: ENST00000505346.5

SMN2-205, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 3

Gene SMN2, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-205ENST00000505346 SIAH1Q8IUQ4 282 aa6.91□□□□□ -1.3
SMN2-205ENST00000505346 DDX54Q8TDD1 881 aaKnown RBP6.91□□□□□ -1.3
SMN2-205ENST00000505346 PPP1R16BQ96T49 567 aa6.91□□□□□ -1.3
SMN2-205ENST00000505346 CORO1BQ9BR76 489 aa6.91□□□□□ -1.3
SMN2-205ENST00000505346 GSX1Q9H4S2 264 aaPredicted RBP6.91□□□□□ -1.3
SMN2-205ENST00000505346 AOC3Q16853 763 aa6.9□□□□□ -1.3
SMN2-205ENST00000505346 NOM1Q5C9Z4 860 aaKnown RBP6.9□□□□□ -1.3
SMN2-205ENST00000505346 ALKBH2Q6NS38 261 aa6.9□□□□□ -1.3
SMN2-205ENST00000505346 LRRC56Q8IYG6 542 aaPredicted RBP6.9□□□□□ -1.3
SMN2-205ENST00000505346 FAM181AQ8N9Y4 354 aa6.9□□□□□ -1.3
SMN2-205ENST00000505346 CLEC4MQ9H2X3 399 aaPredicted RBP6.9□□□□□ -1.3
SMN2-205ENST00000505346 MTMR7Q9Y216 660 aa6.9□□□□□ -1.3
SMN2-205ENST00000505346 TNFRSF21O75509 655 aa6.89□□□□□ -1.31
SMN2-205ENST00000505346 TSPAN15O95858 294 aa6.89□□□□□ -1.31
SMN2-205ENST00000505346 CTSBP07858 339 aa6.89□□□□□ -1.31
SMN2-205ENST00000505346 FAM87AP0C7U9 286 aa6.89□□□□□ -1.31
SMN2-205ENST00000505346 CD96P40200 585 aa6.89□□□□□ -1.31
SMN2-205ENST00000505346 KCNMB1Q16558 191 aa6.89□□□□□ -1.31
SMN2-205ENST00000505346 IFI16Q16666 785 aaKnown RBP6.89□□□□□ -1.31
SMN2-205ENST00000505346 ANGEL2Q5VTE6 544 aaKnown RBP6.89□□□□□ -1.31
SMN2-205ENST00000505346 SLC23A3Q6PIS1 610 aa6.89□□□□□ -1.31
SMN2-205ENST00000505346 CILP2Q8IUL8 1156 aa6.89□□□□□ -1.31
SMN2-205ENST00000505346 HRASLS5Q96KN8 279 aa6.89□□□□□ -1.31
SMN2-205ENST00000505346 SEPT3Q9UH03 358 aa6.89□□□□□ -1.31
SMN2-205ENST00000505346 METTL12A8MUP2 240 aa6.88□□□□□ -1.31
SMN2-205ENST00000505346 AAMPQ13685 434 aa6.88□□□□□ -1.31
SMN2-205ENST00000505346 ZNF423Q2M1K9 1284 aa6.88□□□□□ -1.31
SMN2-205ENST00000505346 FLAD1Q8NFF5 587 aa6.88□□□□□ -1.31
SMN2-205ENST00000505346 SNX29Q8TEQ0 813 aa6.88□□□□□ -1.31
SMN2-205ENST00000505346 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.88□□□□□ -1.31
SMN2-205ENST00000505346 TMEM265A0A087WTH1 108 aa6.87□□□□□ -1.31
SMN2-205ENST00000505346 A0A096LPE4 126 aa6.87□□□□□ -1.31
SMN2-205ENST00000505346 A0A1W2PPZ6 126 aa6.87□□□□□ -1.31
SMN2-205ENST00000505346 ARID3CA6NKF2 412 aa6.87□□□□□ -1.31
SMN2-205ENST00000505346 AOC2O75106 756 aa6.87□□□□□ -1.31
SMN2-205ENST00000505346 ZSCAN22P10073 491 aaPredicted RBP6.87□□□□□ -1.31
SMN2-205ENST00000505346 PEAR1Q5VY43 1037 aaPredicted RBP6.87□□□□□ -1.31
SMN2-205ENST00000505346 LCNL1Q6ZST4 164 aa6.87□□□□□ -1.31
SMN2-205ENST00000505346 HELQQ8TDG4 1101 aa6.87□□□□□ -1.31
SMN2-205ENST00000505346 MKNK2Q9HBH9 465 aa6.87□□□□□ -1.31
SMN2-205ENST00000505346 LATS2Q9NRM7 1088 aa6.87□□□□□ -1.31
SMN2-205ENST00000505346 AMOTL2Q9Y2J4 779 aa6.87□□□□□ -1.31
SMN2-205ENST00000505346 ZNF503-AS2A6NEH8 195 aa6.86□□□□□ -1.31
SMN2-205ENST00000505346 CDK5R2Q13319 367 aa6.86□□□□□ -1.31
SMN2-205ENST00000505346 PIDD1Q9HB75 910 aa6.86□□□□□ -1.31
SMN2-205ENST00000505346 SYNGAP1Q96PV0 1343 aa6.85□□□□□ -1.31
SMN2-205ENST00000505346 EIF1AXP47813 144 aaKnown RBP6.85□□□□□ -1.31
SMN2-205ENST00000505346 EHHADHQ08426 723 aa6.85□□□□□ -1.31
SMN2-205ENST00000505346 PDE3AQ14432 1141 aa6.85□□□□□ -1.31
SMN2-205ENST00000505346 SYDE1Q6ZW31 735 aaPredicted RBP6.85□□□□□ -1.31
SMN2-205ENST00000505346 GTF3C2Q8WUA4 911 aaPredicted RBP6.85□□□□□ -1.31
SMN2-205ENST00000505346 SLAIN2Q9P270 581 aa6.85□□□□□ -1.31
SMN2-205ENST00000505346 FAM13AO94988 1023 aa6.84□□□□□ -1.31
SMN2-205ENST00000505346 BUD31P41223 144 aaPredicted RBP6.84□□□□□ -1.31
SMN2-205ENST00000505346 USP5P45974 858 aa6.84□□□□□ -1.31
SMN2-205ENST00000505346 ECM1Q16610 540 aa6.84□□□□□ -1.31
SMN2-205ENST00000505346 C1QL4Q86Z23 238 aa6.84□□□□□ -1.31
SMN2-205ENST00000505346 LMCD1Q9NZU5 365 aa6.84□□□□□ -1.31
SMN2-205ENST00000505346 CRIM1Q9NZV1 1036 aa6.84□□□□□ -1.31
SMN2-205ENST00000505346 RAPGEFL1Q9UHV5 662 aa6.84□□□□□ -1.31
SMN2-205ENST00000505346 FOXD3Q9UJU5 478 aaPredicted RBP6.84□□□□□ -1.31
SMN2-205ENST00000505346 PPP1R9AQ9ULJ8 1098 aa6.84□□□□□ -1.31
SMN2-205ENST00000505346 POLIQ9UNA4 740 aa6.84□□□□□ -1.31
SMN2-205ENST00000505346 ECEL1O95672 775 aa6.83□□□□□ -1.32
SMN2-205ENST00000505346 CEACAM5P06731 702 aa6.83□□□□□ -1.32
SMN2-205ENST00000505346 SLFN14P0C7P3 912 aa6.83□□□□□ -1.32
SMN2-205ENST00000505346 SSFA2P28290 1259 aa6.83□□□□□ -1.32
SMN2-205ENST00000505346 KRTAP5-3Q6L8H2 238 aa6.83□□□□□ -1.32
SMN2-205ENST00000505346 MPZL3Q6UWV2 235 aa6.83□□□□□ -1.32
SMN2-205ENST00000505346 TTLL10Q6ZVT0 673 aa6.83□□□□□ -1.32
SMN2-205ENST00000505346 LIN37Q96GY3 246 aaPredicted RBP6.83□□□□□ -1.32
SMN2-205ENST00000505346 WDR18Q9BV38 432 aa6.83□□□□□ -1.32
SMN2-205ENST00000505346 AFMP43652 599 aa6.82□□□□□ -1.32
SMN2-205ENST00000505346 OXCT1P55809 520 aa6.82□□□□□ -1.32
SMN2-205ENST00000505346 SPRED3Q2MJR0 410 aa6.82□□□□□ -1.32
SMN2-205ENST00000505346 CCNJLQ8IV13 435 aa6.82□□□□□ -1.32
SMN2-205ENST00000505346 CCDC82Q8N4S0 544 aa6.82□□□□□ -1.32
SMN2-205ENST00000505346 TRIM56Q9BRZ2 755 aaKnown RBP6.82□□□□□ -1.32
SMN2-205ENST00000505346 ATXN3LQ9H3M9 355 aa6.82□□□□□ -1.32
SMN2-205ENST00000505346 SNX11Q9Y5W9 270 aa6.82□□□□□ -1.32
SMN2-205ENST00000505346 NFIBO00712 420 aa6.81□□□□□ -1.32
SMN2-205ENST00000505346 MPSTP25325 297 aa6.81□□□□□ -1.32
SMN2-205ENST00000505346 GRIA4P48058 902 aa6.81□□□□□ -1.32
SMN2-205ENST00000505346 FKBP4Q02790 459 aaKnown RBP eCLIP6.81□□□□□ -1.32
SMN2-205ENST00000505346 SF3B2Q13435 895 aaKnown RBP6.81□□□□□ -1.32
SMN2-205ENST00000505346 SMYD4Q8IYR2 804 aaPredicted RBP6.81□□□□□ -1.32
SMN2-205ENST00000505346 ASB11Q8WXH4 323 aa6.81□□□□□ -1.32
SMN2-205ENST00000505346 LIN7BQ9HAP6 207 aa6.81□□□□□ -1.32
SMN2-205ENST00000505346 ZFYVE28Q9HCC9 887 aa6.81□□□□□ -1.32
SMN2-205ENST00000505346 PRDM7Q9NQW5 492 aa6.81□□□□□ -1.32
SMN2-205ENST00000505346 TMEM88BA6NKF7 163 aa6.8□□□□□ -1.32
SMN2-205ENST00000505346 B3GALT4O96024 378 aa6.8□□□□□ -1.32
SMN2-205ENST00000505346 NPR3P17342 541 aa6.8□□□□□ -1.32
SMN2-205ENST00000505346 PLAGL2Q9UPG8 496 aa6.8□□□□□ -1.32
SMN2-205ENST00000505346 RNGTTO60942 597 aaKnown RBP6.79□□□□□ -1.32
SMN2-205ENST00000505346 C1QTNF9P0C862 333 aa6.79□□□□□ -1.32
SMN2-205ENST00000505346 ITIH2P19823 946 aa6.79□□□□□ -1.32
SMN2-205ENST00000505346 ZP2Q05996 745 aa6.79□□□□□ -1.32
SMN2-205ENST00000505346 AP3B2Q13367 1082 aa6.79□□□□□ -1.32
SMN2-205ENST00000505346 IKZF1Q13422 519 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms