RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 ZNF408Q9H9D4 720 aa11.97□□□□□ -0.49
NR1I3-220ENST00000505005 IL1RAPL2Q9NP60 686 aa11.97□□□□□ -0.49
NR1I3-220ENST00000505005 ECHDC1Q9NTX5 307 aa11.97□□□□□ -0.49
NR1I3-220ENST00000505005 JAG2Q9Y219 1238 aa11.97□□□□□ -0.49
NR1I3-220ENST00000505005 ZNF646O15015 1829 aaPredicted RBP11.97□□□□□ -0.49
NR1I3-220ENST00000505005 RPAP1Q9BWH6 1393 aaPredicted RBP11.96□□□□□ -0.49
NR1I3-220ENST00000505005 MROH7-TTC4A0A0A0MT08 1334 aa11.96□□□□□ -0.49
NR1I3-220ENST00000505005 GAKO14976 1311 aa11.96□□□□□ -0.49
NR1I3-220ENST00000505005 GPR75-ASB3A0A0A6YYF3 556 aa11.96□□□□□ -0.49
NR1I3-220ENST00000505005 PRDX5P30044 214 aa11.96□□□□□ -0.49
NR1I3-220ENST00000505005 RASA3Q14644 834 aa11.96□□□□□ -0.49
NR1I3-220ENST00000505005 MAP3K11Q16584 847 aa11.96□□□□□ -0.49
NR1I3-220ENST00000505005 CST9Q5W186 159 aa11.96□□□□□ -0.49
NR1I3-220ENST00000505005 APOBEC3HQ6NTF7 200 aaKnown RBP11.96□□□□□ -0.49
NR1I3-220ENST00000505005 RGMBQ6NW40 437 aa11.96□□□□□ -0.49
NR1I3-220ENST00000505005 DNAJC5GQ8N7S2 189 aa11.96□□□□□ -0.49
NR1I3-220ENST00000505005 JMYQ8N9B5 988 aa11.96□□□□□ -0.49
NR1I3-220ENST00000505005 NSUN4Q96CB9 384 aaKnown RBP11.96□□□□□ -0.49
NR1I3-220ENST00000505005 IDI2Q9BXS1 227 aa11.96□□□□□ -0.49
NR1I3-220ENST00000505005 DHX36Q9H2U1 1008 aaKnown RBP11.96□□□□□ -0.49
NR1I3-220ENST00000505005 TDRD3Q9H7E2 651 aaKnown RBP11.96□□□□□ -0.49
NR1I3-220ENST00000505005 USP40Q9NVE5 1235 aa11.96□□□□□ -0.49
NR1I3-220ENST00000505005 APBB1O00213 710 aa11.95□□□□□ -0.5
NR1I3-220ENST00000505005 TRAF5O00463 557 aa11.95□□□□□ -0.5
NR1I3-220ENST00000505005 ZFYP08048 801 aaPredicted RBP11.95□□□□□ -0.5
NR1I3-220ENST00000505005 PPP4CP60510 307 aa11.95□□□□□ -0.5
NR1I3-220ENST00000505005 MECOMQ03112 1051 aa11.95□□□□□ -0.5
NR1I3-220ENST00000505005 PAXIP1Q6ZW49 1069 aaPredicted RBP11.95□□□□□ -0.5
NR1I3-220ENST00000505005 ANKRD13AQ8IZ07 590 aa11.95□□□□□ -0.5
NR1I3-220ENST00000505005 AIDAQ96BJ3 306 aa11.95□□□□□ -0.5
NR1I3-220ENST00000505005 DDRGK1Q96HY6 314 aa11.95□□□□□ -0.5
NR1I3-220ENST00000505005 DAGLAQ9Y4D2 1042 aa11.95□□□□□ -0.5
NR1I3-220ENST00000505005 MYH2Q9UKX2 1941 aa11.94□□□□□ -0.5
NR1I3-220ENST00000505005 WDR33Q9C0J8 1336 aaKnown RBP11.94□□□□□ -0.5
NR1I3-220ENST00000505005 CLRN2A0PK11 232 aa11.94□□□□□ -0.5
NR1I3-220ENST00000505005 ADM5C9JUS6 153 aa11.94□□□□□ -0.5
NR1I3-220ENST00000505005 WDHD1O75717 1129 aaPredicted RBP11.94□□□□□ -0.5
NR1I3-220ENST00000505005 GLRX3O76003 335 aaKnown RBP11.94□□□□□ -0.5
NR1I3-220ENST00000505005 ZNF157P51786 506 aaPredicted RBP11.94□□□□□ -0.5
NR1I3-220ENST00000505005 PCDHB15Q9Y5E8 787 aa11.94□□□□□ -0.5
NR1I3-220ENST00000505005 CSADQ9Y600 493 aa11.94□□□□□ -0.5
NR1I3-220ENST00000505005 PAPPA2Q9BXP8 1791 aa11.94□□□□□ -0.5
NR1I3-220ENST00000505005 IDH1O75874 414 aaKnown RBP11.93□□□□□ -0.5
NR1I3-220ENST00000505005 CYP2E1P05181 493 aaPredicted RBP11.93□□□□□ -0.5
NR1I3-220ENST00000505005 NEFLP07196 543 aa11.93□□□□□ -0.5
NR1I3-220ENST00000505005 BTDP43251 543 aa11.93□□□□□ -0.5
NR1I3-220ENST00000505005 ZAP70P43403 619 aa11.93□□□□□ -0.5
NR1I3-220ENST00000505005 ANKRD45Q5TZF3 282 aa11.93□□□□□ -0.5
NR1I3-220ENST00000505005 OTUD7BQ6GQQ9 843 aa11.93□□□□□ -0.5
NR1I3-220ENST00000505005 CDC42EP5Q6NZY7 148 aa11.93□□□□□ -0.5
NR1I3-220ENST00000505005 POTEDQ86YR6 584 aa11.93□□□□□ -0.5
NR1I3-220ENST00000505005 AMOTL1Q8IY63 956 aa11.93□□□□□ -0.5
NR1I3-220ENST00000505005 SLC10A4Q96EP9 437 aa11.93□□□□□ -0.5
NR1I3-220ENST00000505005 CAPNS2Q96L46 248 aa11.93□□□□□ -0.5
NR1I3-220ENST00000505005 HAUS7Q99871 368 aa11.93□□□□□ -0.5
NR1I3-220ENST00000505005 TBC1D2Q9BYX2 928 aa11.93□□□□□ -0.5
NR1I3-220ENST00000505005 PAG1Q9NWQ8 432 aa11.93□□□□□ -0.5
NR1I3-220ENST00000505005 TCP10L2B9ZVM9 353 aa11.92□□□□□ -0.5
NR1I3-220ENST00000505005 ALDH1A1P00352 501 aa11.92□□□□□ -0.5
NR1I3-220ENST00000505005 ZBTB48P10074 688 aaPredicted RBP11.92□□□□□ -0.5
NR1I3-220ENST00000505005 SREBF2Q12772 1141 aa11.92□□□□□ -0.5
NR1I3-220ENST00000505005 ZNF341Q9BYN7 854 aa11.92□□□□□ -0.5
NR1I3-220ENST00000505005 GINM1Q9NU53 330 aa11.92□□□□□ -0.5
NR1I3-220ENST00000505005 MKRN1Q9UHC7 482 aaKnown RBP11.92□□□□□ -0.5
NR1I3-220ENST00000505005 ANGEL1Q9UNK9 670 aaKnown RBP11.92□□□□□ -0.5
NR1I3-220ENST00000505005 AKAP11Q9UKA4 1901 aa11.92□□□□□ -0.5
NR1I3-220ENST00000505005 COL2A1P02458 1487 aaPredicted RBP11.91□□□□□ -0.5
NR1I3-220ENST00000505005 TBC1D12O60347 775 aa11.91□□□□□ -0.5
NR1I3-220ENST00000505005 HLA-DOAP06340 250 aa11.91□□□□□ -0.5
NR1I3-220ENST00000505005 CYP7A1P22680 504 aa11.91□□□□□ -0.5
NR1I3-220ENST00000505005 MAP3K9P80192 1104 aa11.91□□□□□ -0.5
NR1I3-220ENST00000505005 UBE3CQ15386 1083 aa11.91□□□□□ -0.5
NR1I3-220ENST00000505005 DIXDC1Q155Q3 683 aa11.91□□□□□ -0.5
NR1I3-220ENST00000505005 LDLRAD1Q5T700 205 aa11.91□□□□□ -0.5
NR1I3-220ENST00000505005 SLC9C2Q5TAH2 1124 aa11.91□□□□□ -0.5
NR1I3-220ENST00000505005 FOXP4Q8IVH2 680 aaPredicted RBP11.91□□□□□ -0.5
NR1I3-220ENST00000505005 ZSCAN29Q8IWY8 852 aaPredicted RBP11.91□□□□□ -0.5
NR1I3-220ENST00000505005 SMC5Q8IY18 1101 aa11.91□□□□□ -0.5
NR1I3-220ENST00000505005 DNAJC2Q99543 621 aaKnown RBP11.91□□□□□ -0.5
NR1I3-220ENST00000505005 TRIM34Q9BYJ4 488 aa11.91□□□□□ -0.5
NR1I3-220ENST00000505005 SNRKQ9NRH2 765 aa11.91□□□□□ -0.5
NR1I3-220ENST00000505005 HERC5Q9UII4 1024 aaKnown RBP11.91□□□□□ -0.5
NR1I3-220ENST00000505005 AK9Q5TCS8 1911 aa11.91□□□□□ -0.5
NR1I3-220ENST00000505005 AOX1Q06278 1338 aa11.9□□□□□ -0.5
NR1I3-220ENST00000505005 MANSC4A6NHS7 340 aaPredicted RBP11.9□□□□□ -0.5
NR1I3-220ENST00000505005 MX1P20591 662 aa11.9□□□□□ -0.5
NR1I3-220ENST00000505005 VEGFBP49765 207 aa11.9□□□□□ -0.5
NR1I3-220ENST00000505005 ERICH6BQ5W0A0 696 aa11.9□□□□□ -0.5
NR1I3-220ENST00000505005 TBC1D9Q6ZT07 1266 aa11.9□□□□□ -0.5
NR1I3-220ENST00000505005 TTC6Q86TZ1 520 aa11.9□□□□□ -0.5
NR1I3-220ENST00000505005 TEX11Q8IYF3 940 aa11.9□□□□□ -0.5
NR1I3-220ENST00000505005 CRNKL1Q9BZJ0 848 aaKnown RBP11.9□□□□□ -0.5
NR1I3-220ENST00000505005 BOLA2Q9H3K6 86 aa11.9□□□□□ -0.5
NR1I3-220ENST00000505005 PI4KBQ9UBF8 816 aa11.9□□□□□ -0.5
NR1I3-220ENST00000505005 ASTN2O75129 1339 aaPredicted RBP11.89□□□□□ -0.51
NR1I3-220ENST00000505005 GOLIM4O00461 696 aa11.89□□□□□ -0.51
NR1I3-220ENST00000505005 SLC10A3P09131 477 aa11.89□□□□□ -0.51
NR1I3-220ENST00000505005 GNAT2P19087 354 aa11.89□□□□□ -0.51
NR1I3-220ENST00000505005 GRIK5Q16478 980 aa11.89□□□□□ -0.51
NR1I3-220ENST00000505005 NBPF12Q5TAG4 269 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms