RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 GLMNQ92990 594 aa6.33□□□□□ -1.4
RFC1-208ENST00000504849 DCAF1Q9Y4B6 1507 aa6.33□□□□□ -1.4
RFC1-208ENST00000504849 BRD2P25440 801 aaKnown RBP6.32□□□□□ -1.4
RFC1-208ENST00000504849 GGNQ86UU5 652 aa6.32□□□□□ -1.4
RFC1-208ENST00000504849 TMEM102Q8N9M5 508 aaPredicted RBP6.32□□□□□ -1.4
RFC1-208ENST00000504849 BSNDQ8WZ55 320 aa6.32□□□□□ -1.4
RFC1-208ENST00000504849 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.32□□□□□ -1.41e-7■■■■■ 115.4
RFC1-208ENST00000504849 CTNND2Q9UQB3 1225 aa6.32□□□□□ -1.4
RFC1-208ENST00000504849 ESRRAP11474 423 aaPredicted RBP6.31□□□□□ -1.4
RFC1-208ENST00000504849 AOC3Q16853 763 aa6.31□□□□□ -1.4
RFC1-208ENST00000504849 NXPE3Q969Y0 559 aa6.31□□□□□ -1.4
RFC1-208ENST00000504849 PLAGL2Q9UPG8 496 aa6.31□□□□□ -1.4
RFC1-208ENST00000504849 FNDC3AQ9Y2H6 1198 aaKnown RBP6.31□□□□□ -1.4
RFC1-208ENST00000504849 FAM196BA6NMK8 535 aa6.3□□□□□ -1.4
RFC1-208ENST00000504849 NFIBO00712 420 aa6.3□□□□□ -1.4
RFC1-208ENST00000504849 ZAP70P43403 619 aa6.3□□□□□ -1.4
RFC1-208ENST00000504849 CYP27C1Q4G0S4 372 aa6.3□□□□□ -1.4
RFC1-208ENST00000504849 ANGEL2Q5VTE6 544 aaKnown RBP6.3□□□□□ -1.4
RFC1-208ENST00000504849 GPR152Q8TDT2 470 aa6.3□□□□□ -1.4
RFC1-208ENST00000504849 ZNF428Q96B54 188 aa6.3□□□□□ -1.4
RFC1-208ENST00000504849 ELP3Q9H9T3 547 aa6.3□□□□□ -1.4
RFC1-208ENST00000504849 LGR6Q9HBX8 967 aa6.3□□□□□ -1.4
RFC1-208ENST00000504849 TFIP11Q9UBB9 837 aaKnown RBP6.3□□□□□ -1.4
RFC1-208ENST00000504849 PITPNM2Q9BZ72 1349 aa6.29□□□□□ -1.4
RFC1-208ENST00000504849 A0A0G2JLL6 359 aaPredicted RBP6.29□□□□□ -1.4
RFC1-208ENST00000504849 FOXD2O60548 495 aaPredicted RBP6.29□□□□□ -1.4
RFC1-208ENST00000504849 KCNA10Q16322 511 aa6.29□□□□□ -1.4
RFC1-208ENST00000504849 IFI16Q16666 785 aaKnown RBP6.29□□□□□ -1.4
RFC1-208ENST00000504849 CCDC27Q2M243 656 aa6.29□□□□□ -1.4
RFC1-208ENST00000504849 DYMQ7RTS9 669 aa6.29□□□□□ -1.4
RFC1-208ENST00000504849 PCGF6Q9BYE7 350 aa6.29□□□□□ -1.4
RFC1-208ENST00000504849 FAM13BQ9NYF5 915 aa6.29□□□□□ -1.4
RFC1-208ENST00000504849 DAGLAQ9Y4D2 1042 aa6.29□□□□□ -1.4
RFC1-208ENST00000504849 GLI1P08151 1106 aa6.28□□□□□ -1.4
RFC1-208ENST00000504849 HMGB1P09429 215 aaKnown RBP6.28□□□□□ -1.4
RFC1-208ENST00000504849 PDE12Q6L8Q7 609 aaKnown RBP6.28□□□□□ -1.4
RFC1-208ENST00000504849 C1orf127Q8N9H9 656 aa6.28□□□□□ -1.4
RFC1-208ENST00000504849 HRASLS5Q96KN8 279 aa6.28□□□□□ -1.4
RFC1-208ENST00000504849 MYO15BQ96JP2 1530 aa6.27□□□□□ -1.41
RFC1-208ENST00000504849 FAM87AP0C7U9 286 aa6.27□□□□□ -1.41
RFC1-208ENST00000504849 OXCT1P55809 520 aa6.27□□□□□ -1.41
RFC1-208ENST00000504849 NFKB2Q00653 900 aa6.27□□□□□ -1.41
RFC1-208ENST00000504849 GSTM4Q03013 218 aa6.27□□□□□ -1.41
RFC1-208ENST00000504849 C16orf46Q6P387 395 aa6.27□□□□□ -1.41
RFC1-208ENST00000504849 SND1Q7KZF4 910 aaKnown RBP eCLIP6.27□□□□□ -1.41
RFC1-208ENST00000504849 ZBTB39O15060 712 aa6.26□□□□□ -1.41
RFC1-208ENST00000504849 MED14OSP0DP75 135 aa6.26□□□□□ -1.41
RFC1-208ENST00000504849 ZEB1P37275 1124 aaPredicted RBP6.26□□□□□ -1.41
RFC1-208ENST00000504849 ASPAP45381 313 aa6.26□□□□□ -1.41
RFC1-208ENST00000504849 SRPK2P78362 688 aaKnown RBP6.26□□□□□ -1.41
RFC1-208ENST00000504849 CDK5R2Q13319 367 aa6.26□□□□□ -1.41
RFC1-208ENST00000504849 AKAP4Q5JQC9 854 aa6.26□□□□□ -1.41
RFC1-208ENST00000504849 FBXO15Q8NCQ5 510 aaPredicted RBP6.26□□□□□ -1.41
RFC1-208ENST00000504849 ZKSCAN3Q9BRR0 538 aa6.26□□□□□ -1.41
RFC1-208ENST00000504849 CHRDQ9H2X0 955 aa6.26□□□□□ -1.41
RFC1-208ENST00000504849 KCNK12Q9HB15 430 aa6.26□□□□□ -1.41
RFC1-208ENST00000504849 MKNK2Q9HBH9 465 aa6.26□□□□□ -1.41
RFC1-208ENST00000504849 CEACAM5P06731 702 aa6.25□□□□□ -1.41
RFC1-208ENST00000504849 CIAPIN1Q6FI81 312 aa6.25□□□□□ -1.41
RFC1-208ENST00000504849 PARD6AQ9NPB6 346 aa6.25□□□□□ -1.41
RFC1-208ENST00000504849 AP4E1Q9UPM8 1137 aa6.25□□□□□ -1.41
RFC1-208ENST00000504849 PSPNO60542 156 aa6.24□□□□□ -1.41
RFC1-208ENST00000504849 CFAP70Q5T0N1 1121 aa6.24□□□□□ -1.41
RFC1-208ENST00000504849 MPZL3Q6UWV2 235 aa6.24□□□□□ -1.41
RFC1-208ENST00000504849 ATG14Q6ZNE5 492 aa6.24□□□□□ -1.41
RFC1-208ENST00000504849 OSMRQ99650 979 aa6.24□□□□□ -1.41
RFC1-208ENST00000504849 TNKS2Q9H2K2 1166 aa6.24□□□□□ -1.41
RFC1-208ENST00000504849 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.23□□□□□ -1.41
RFC1-208ENST00000504849 CES1P23141 567 aa6.23□□□□□ -1.41
RFC1-208ENST00000504849 MAOBP27338 520 aa6.23□□□□□ -1.41
RFC1-208ENST00000504849 CAPN12Q6ZSI9 719 aa6.23□□□□□ -1.41
RFC1-208ENST00000504849 BHLHE41Q9C0J9 482 aaPredicted RBP6.23□□□□□ -1.41
RFC1-208ENST00000504849 IVNS1ABPQ9Y6Y0 642 aa6.23□□□□□ -1.41
RFC1-208ENST00000504849 TMEM265A0A087WTH1 108 aa6.22□□□□□ -1.41
RFC1-208ENST00000504849 LEFTY1O75610 366 aa6.22□□□□□ -1.41
RFC1-208ENST00000504849 ECEL1O95672 775 aa6.22□□□□□ -1.41
RFC1-208ENST00000504849 AFMP43652 599 aa6.22□□□□□ -1.41
RFC1-208ENST00000504849 B4GALNT3Q6L9W6 998 aa6.22□□□□□ -1.41
RFC1-208ENST00000504849 ZNF438Q7Z4V0 828 aa6.22□□□□□ -1.41
RFC1-208ENST00000504849 PPP1R12CQ9BZL4 782 aa6.22□□□□□ -1.41
RFC1-208ENST00000504849 NSUN3Q9H649 340 aaKnown RBP6.22□□□□□ -1.41
RFC1-208ENST00000504849 VRTNQ9H8Y1 702 aa6.22□□□□□ -1.41
RFC1-208ENST00000504849 RFX1P22670 979 aa6.21□□□□□ -1.42
RFC1-208ENST00000504849 XKR5Q6UX68 686 aa6.21□□□□□ -1.42
RFC1-208ENST00000504849 NUDT16Q96DE0 195 aaKnown RBP6.21□□□□□ -1.42
RFC1-208ENST00000504849 KIRREL1Q96J84 757 aa6.21□□□□□ -1.42
RFC1-208ENST00000504849 DIRC2Q96SL1 478 aa6.21□□□□□ -1.42
RFC1-208ENST00000504849 TMPRSS5Q9H3S3 457 aa6.21□□□□□ -1.42
RFC1-208ENST00000504849 C19orf73Q9NVV2 129 aa6.21□□□□□ -1.42
RFC1-208ENST00000504849 SMG5Q9UPR3 1016 aaKnown RBP6.21□□□□□ -1.42
RFC1-208ENST00000504849 GNEQ9Y223 722 aaKnown RBP6.21□□□□□ -1.42
RFC1-208ENST00000504849 CECR2Q9BXF3 1484 aa6.21□□□□□ -1.42
RFC1-208ENST00000504849 ATG7O95352 703 aa6.2□□□□□ -1.42
RFC1-208ENST00000504849 TMEM253P0C7T8 217 aa6.2□□□□□ -1.42
RFC1-208ENST00000504849 LINC00310P59036 64 aa6.2□□□□□ -1.42
RFC1-208ENST00000504849 ZP2Q05996 745 aa6.2□□□□□ -1.42
RFC1-208ENST00000504849 OCLNQ16625 522 aa6.2□□□□□ -1.42
RFC1-208ENST00000504849 PRIMPOLQ96LW4 560 aa6.2□□□□□ -1.42
RFC1-208ENST00000504849 PPP1R9AQ9ULJ8 1098 aa6.2□□□□□ -1.42
RFC1-208ENST00000504849 ETV2O00321 342 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms